RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 WWC3Q9ULE0 1092 aa14.62□□□□□ -0.07
PCDHGA3-201ENST00000253812 GADD45BO75293 160 aaPredicted RBP14.62□□□□□ -0.07
PCDHGA3-201ENST00000253812 TMCO4Q5TGY1 634 aa14.62□□□□□ -0.07
PCDHGA3-201ENST00000253812 CCHCR1Q8TD31 782 aa14.62□□□□□ -0.07
PCDHGA3-201ENST00000253812 YEATS2Q9ULM3 1422 aa14.62□□□□□ -0.07
PCDHGA3-201ENST00000253812 ABCA8O94911 1581 aa14.61□□□□□ -0.07
PCDHGA3-201ENST00000253812 ORAI2Q96SN7 254 aa14.61□□□□□ -0.07
PCDHGA3-201ENST00000253812 IRAK4Q9NWZ3 460 aa14.61□□□□□ -0.07
PCDHGA3-201ENST00000253812 HOXC9P31274 260 aa14.61□□□□□ -0.07
PCDHGA3-201ENST00000253812 MCMDC2Q4G0Z9 681 aa14.61□□□□□ -0.07
PCDHGA3-201ENST00000253812 ZSCAN29Q8IWY8 852 aaPredicted RBP14.61□□□□□ -0.07
PCDHGA3-201ENST00000253812 PDCD7Q8N8D1 485 aaKnown RBP14.61□□□□□ -0.07
PCDHGA3-201ENST00000253812 TEX13AQ9BXU3 409 aaPredicted RBP14.61□□□□□ -0.07
PCDHGA3-201ENST00000253812 KRT23Q9C075 422 aa14.61□□□□□ -0.07
PCDHGA3-201ENST00000253812 EHMT1Q9H9B1 1298 aa14.61□□□□□ -0.07
PCDHGA3-201ENST00000253812 SPOPO43791 374 aa14.61□□□□□ -0.07
PCDHGA3-201ENST00000253812 PPARDQ03181 441 aa14.61□□□□□ -0.07
PCDHGA3-201ENST00000253812 DYNC1I2Q13409 638 aaKnown RBP14.61□□□□□ -0.07
PCDHGA3-201ENST00000253812 RAPGEF1Q13905 1077 aa14.61□□□□□ -0.07
PCDHGA3-201ENST00000253812 RPS6KA1Q15418 735 aa14.61□□□□□ -0.07
PCDHGA3-201ENST00000253812 UBL4BQ8N7F7 174 aa14.61□□□□□ -0.07
PCDHGA3-201ENST00000253812 FLOT1O75955 427 aa14.61□□□□□ -0.07
PCDHGA3-201ENST00000253812 BRD1O95696 1058 aa14.61□□□□□ -0.07
PCDHGA3-201ENST00000253812 CNNM2Q9H8M5 875 aa14.61□□□□□ -0.07
PCDHGA3-201ENST00000253812 NEO1Q92859 1461 aa14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 ARHGAP42A6NI28 874 aa14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 CCDC92Q53HC0 331 aaPredicted RBP14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 LGSNQ5TDP6 509 aa14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 SRGAP1Q7Z6B7 1085 aa14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 PLEKHM2Q8IWE5 1019 aa14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 LRRC43Q8N309 656 aa14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 NFATC2IPQ8NCF5 419 aa14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 TRIM58Q8NG06 486 aa14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 ASIC3Q9UHC3 531 aa14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 TRIM35Q9UPQ4 493 aa14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 PPP2R2CQ9Y2T4 447 aa14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 KAT6BQ8WYB5 2073 aa14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 CREB3L3Q68CJ9 461 aa14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 ANKRD42Q8N9B4 389 aa14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 KLHL29Q96CT2 875 aa14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 KAT14Q9H8E8 782 aa14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 PYCARDQ9ULZ3 195 aa14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 LOC102724159A0A0B4J2E5 919 aa14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 PHEXP78562 749 aa14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 PWP2Q15269 919 aaKnown RBP14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 PPP2R5EQ16537 467 aa14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 CHMLP26374 656 aa14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 CALML3P27482 149 aa14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 RAD51AP2Q09MP3 1159 aa14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 DHX32Q7L7V1 743 aaKnown RBP14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 HS2ST1Q7LGA3 356 aa14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 NOP53Q9NZM5 478 aaKnown RBP14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 CDC23Q9UJX2 597 aa14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 KCNH3Q9ULD8 1083 aa14.6□□□□□ -0.07
PCDHGA3-201ENST00000253812 GUCY2FP51841 1108 aa14.59□□□□□ -0.07
PCDHGA3-201ENST00000253812 ESRRGP62508 458 aa14.59□□□□□ -0.07
PCDHGA3-201ENST00000253812 LDHAL6AQ6ZMR3 332 aa14.59□□□□□ -0.07
PCDHGA3-201ENST00000253812 ZFYVE9O95405 1425 aa14.59□□□□□ -0.07
PCDHGA3-201ENST00000253812 TCP1P17987 556 aaKnown RBP14.59□□□□□ -0.07
PCDHGA3-201ENST00000253812 IRX1P78414 480 aaPredicted RBP14.59□□□□□ -0.07
PCDHGA3-201ENST00000253812 NBPF9Q3BBW0 867 aa14.59□□□□□ -0.07
PCDHGA3-201ENST00000253812 CAVIN4Q5BKX8 364 aa14.59□□□□□ -0.07
PCDHGA3-201ENST00000253812 HIBCHQ6NVY1 386 aaPredicted RBP14.59□□□□□ -0.07
PCDHGA3-201ENST00000253812 MGARPQ8TDB4 240 aa14.59□□□□□ -0.07
PCDHGA3-201ENST00000253812 RILPQ96NA2 401 aa14.59□□□□□ -0.07
PCDHGA3-201ENST00000253812 TRPM2O94759 1503 aa14.59□□□□□ -0.07
PCDHGA3-201ENST00000253812 LTKP29376 864 aa14.59□□□□□ -0.07
PCDHGA3-201ENST00000253812 FCHSD1Q86WN1 690 aa14.59□□□□□ -0.07
PCDHGA3-201ENST00000253812 C16orf71Q8IYS4 520 aaPredicted RBP14.59□□□□□ -0.07
PCDHGA3-201ENST00000253812 IP6K1Q92551 441 aa14.59□□□□□ -0.07
PCDHGA3-201ENST00000253812 HVCN1Q96D96 273 aa14.59□□□□□ -0.07
PCDHGA3-201ENST00000253812 PSMB7Q99436 277 aa14.59□□□□□ -0.07
PCDHGA3-201ENST00000253812 SAMM50Q9Y512 469 aa14.59□□□□□ -0.07
PCDHGA3-201ENST00000253812 SYNRGQ9UMZ2 1314 aa14.59□□□□□ -0.07
PCDHGA3-201ENST00000253812 CCDC169A6NNP5 214 aa14.58□□□□□ -0.07
PCDHGA3-201ENST00000253812 EIF3CLB5ME19 914 aaKnown RBP14.58□□□□□ -0.07
PCDHGA3-201ENST00000253812 EIF3CQ99613 913 aaKnown RBP14.58□□□□□ -0.07
PCDHGA3-201ENST00000253812 SNRKQ9NRH2 765 aa14.58□□□□□ -0.07
PCDHGA3-201ENST00000253812 TSPY2A6NKD2 308 aa14.58□□□□□ -0.08
PCDHGA3-201ENST00000253812 HMGB1P1B2RPK0 211 aaPredicted RBP14.58□□□□□ -0.08
PCDHGA3-201ENST00000253812 GNAQP50148 359 aa14.58□□□□□ -0.08
PCDHGA3-201ENST00000253812 RBM5P52756 815 aaKnown RBP eCLIP14.58□□□□□ -0.08
PCDHGA3-201ENST00000253812 PDE4BQ07343 736 aa14.58□□□□□ -0.08
PCDHGA3-201ENST00000253812 SYCE1Q8N0S2 351 aa14.58□□□□□ -0.08
PCDHGA3-201ENST00000253812 SEC31AO94979 1220 aaKnown RBP14.58□□□□□ -0.08
PCDHGA3-201ENST00000253812 KRT79Q5XKE5 535 aa14.58□□□□□ -0.08
PCDHGA3-201ENST00000253812 CNPY4Q8N129 248 aa14.58□□□□□ -0.08
PCDHGA3-201ENST00000253812 HAUS4Q9H6D7 363 aa14.58□□□□□ -0.08
PCDHGA3-201ENST00000253812 NPC1L1Q9UHC9 1359 aa14.58□□□□□ -0.08
PCDHGA3-201ENST00000253812 MX2P20592 715 aa14.58□□□□□ -0.08
PCDHGA3-201ENST00000253812 VPS41P49754 854 aa14.58□□□□□ -0.08
PCDHGA3-201ENST00000253812 NAA16Q6N069 864 aaPredicted RBP14.58□□□□□ -0.08
PCDHGA3-201ENST00000253812 PPP1R21Q6ZMI0 780 aa14.58□□□□□ -0.08
PCDHGA3-201ENST00000253812 AFAP1L2Q8N4X5 818 aa14.58□□□□□ -0.08
PCDHGA3-201ENST00000253812 IQCDQ96DY2 449 aa14.58□□□□□ -0.08
PCDHGA3-201ENST00000253812 BICC1Q9H694 974 aaKnown RBP14.58□□□□□ -0.08
PCDHGA3-201ENST00000253812 HYOU1Q9Y4L1 999 aa14.58□□□□□ -0.08
PCDHGA3-201ENST00000253812 TTC41PQ6P2S7 1318 aa14.58□□□□□ -0.08
PCDHGA3-201ENST00000253812 IL13P35225 146 aa14.57□□□□□ -0.08
PCDHGA3-201ENST00000253812 RILPL1Q5EBL4 403 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms