RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-231ENST00000639895 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.72□□□□□ -0.37
SPIN3-231ENST00000639895 CSB-PGBD3P0DP91 1061 aa12.71□□□□□ -0.37
SPIN3-231ENST00000639895 IL13P35225 146 aa12.71□□□□□ -0.37
SPIN3-231ENST00000639895 MTIF2P46199 727 aaKnown RBP12.71□□□□□ -0.37
SPIN3-231ENST00000639895 NBPF6Q5VWK0 638 aa12.71□□□□□ -0.37
SPIN3-231ENST00000639895 MICU3Q86XE3 530 aa12.71□□□□□ -0.37
SPIN3-231ENST00000639895 NBPF5PQ86XG9 351 aaPredicted RBP12.71□□□□□ -0.37
SPIN3-231ENST00000639895 IQUBQ8NA54 791 aa12.71□□□□□ -0.37
SPIN3-231ENST00000639895 NBPF4Q96M43 638 aa12.71□□□□□ -0.37
SPIN3-231ENST00000639895 VCXQ9H320 206 aa12.71□□□□□ -0.37
SPIN3-231ENST00000639895 RCOR1Q9UKL0 485 aa12.71□□□□□ -0.37
SPIN3-231ENST00000639895 MARCH6O60337 910 aa12.71□□□□□ -0.37
SPIN3-231ENST00000639895 HIP1RO75146 1068 aa12.71□□□□□ -0.37
SPIN3-231ENST00000639895 KANK3Q6NY19 840 aa12.71□□□□□ -0.37
SPIN3-231ENST00000639895 DDX46Q7L014 1031 aaKnown RBP12.71□□□□□ -0.37
SPIN3-231ENST00000639895 IFT20Q8IY31 132 aa12.71□□□□□ -0.37
SPIN3-231ENST00000639895 IFT74Q96LB3 600 aa12.71□□□□□ -0.37
SPIN3-231ENST00000639895 SPAG1Q07617 926 aa12.71□□□□□ -0.38
SPIN3-231ENST00000639895 EIF4A2Q14240 407 aaKnown RBP12.71□□□□□ -0.38
SPIN3-231ENST00000639895 GPIHBP1Q8IV16 184 aa12.71□□□□□ -0.38
SPIN3-231ENST00000639895 CCDC43Q96MW1 224 aaKnown RBP12.71□□□□□ -0.38
SPIN3-231ENST00000639895 CEP152O94986 1710 aa12.71□□□□□ -0.38
SPIN3-231ENST00000639895 GNAT3A8MTJ3 354 aa12.7□□□□□ -0.38
SPIN3-231ENST00000639895 PFDN1O60925 122 aa12.7□□□□□ -0.38
SPIN3-231ENST00000639895 SEMA3FQ13275 785 aa12.7□□□□□ -0.38
SPIN3-231ENST00000639895 PNKPQ96T60 521 aa12.7□□□□□ -0.38
SPIN3-231ENST00000639895 LUC7L3O95232 432 aaKnown RBP12.7□□□□□ -0.38
SPIN3-231ENST00000639895 TSNAXIP1Q2TAA8 658 aa12.7□□□□□ -0.38
SPIN3-231ENST00000639895 DHX32Q7L7V1 743 aaKnown RBP12.7□□□□□ -0.38
SPIN3-231ENST00000639895 TBC1D1Q86TI0 1168 aaPredicted RBP12.7□□□□□ -0.38
SPIN3-231ENST00000639895 CEP131Q9UPN4 1083 aa12.7□□□□□ -0.38
SPIN3-231ENST00000639895 ACEP12821 1306 aa12.7□□□□□ -0.38
SPIN3-231ENST00000639895 PAK2Q13177 524 aa12.7□□□□□ -0.38
SPIN3-231ENST00000639895 BRAPQ7Z569 592 aa12.7□□□□□ -0.38
SPIN3-231ENST00000639895 COG1Q8WTW3 980 aa12.7□□□□□ -0.38
SPIN3-231ENST00000639895 STAG1Q8WVM7 1258 aa12.7□□□□□ -0.38
SPIN3-231ENST00000639895 L1RE1Q9UN81 338 aa12.7□□□□□ -0.38
SPIN3-231ENST00000639895 VWA3AA6NCI4 1184 aa12.7□□□□□ -0.38
SPIN3-231ENST00000639895 IKBKBO14920 756 aa12.7□□□□□ -0.38
SPIN3-231ENST00000639895 CETN3O15182 167 aa12.7□□□□□ -0.38
SPIN3-231ENST00000639895 AP1G2O75843 785 aa12.7□□□□□ -0.38
SPIN3-231ENST00000639895 SLC30A9Q6PML9 568 aa12.7□□□□□ -0.38
SPIN3-231ENST00000639895 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.7□□□□□ -0.38
SPIN3-231ENST00000639895 MLH3Q9UHC1 1453 aa12.69□□□□□ -0.38
SPIN3-231ENST00000639895 EIF3HO15372 352 aaKnown RBP eCLIP12.69□□□□□ -0.38
SPIN3-231ENST00000639895 CASP14P31944 242 aa12.69□□□□□ -0.38
SPIN3-231ENST00000639895 MTF1Q14872 753 aa12.69□□□□□ -0.38
SPIN3-231ENST00000639895 MLKLQ8NB16 471 aa12.69□□□□□ -0.38
SPIN3-231ENST00000639895 GOLPH3LQ9H4A5 285 aa12.69□□□□□ -0.38
SPIN3-231ENST00000639895 EDC4Q6P2E9 1401 aaKnown RBP12.69□□□□□ -0.38
SPIN3-231ENST00000639895 ANXA1P04083 346 aa12.69□□□□□ -0.38
SPIN3-231ENST00000639895 NR1D1P20393 614 aa12.69□□□□□ -0.38
SPIN3-231ENST00000639895 IARSP41252 1262 aaKnown RBP12.69□□□□□ -0.38
SPIN3-231ENST00000639895 TAF11Q15544 211 aa12.69□□□□□ -0.38
SPIN3-231ENST00000639895 NBPF20Q3BBV1 942 aa12.69□□□□□ -0.38
SPIN3-231ENST00000639895 RASIP1Q5U651 963 aa12.69□□□□□ -0.38
SPIN3-231ENST00000639895 AMOTL1Q8IY63 956 aa12.69□□□□□ -0.38
SPIN3-231ENST00000639895 TRIM47Q96LD4 638 aa12.69□□□□□ -0.38
SPIN3-231ENST00000639895 NBPF3Q9H094 633 aa12.69□□□□□ -0.38
SPIN3-231ENST00000639895 SWAP70Q9UH65 585 aa12.69□□□□□ -0.38
SPIN3-231ENST00000639895 PCDHA5Q9Y5H7 936 aa12.69□□□□□ -0.38
SPIN3-231ENST00000639895 PI4KAP2A4QPH2 592 aa12.69□□□□□ -0.38
SPIN3-231ENST00000639895 POLR2DO15514 142 aaKnown RBP12.69□□□□□ -0.38
SPIN3-231ENST00000639895 PRPF4BQ13523 1007 aaKnown RBP12.69□□□□□ -0.38
SPIN3-231ENST00000639895 KRT71Q3SY84 523 aa12.69□□□□□ -0.38
SPIN3-231ENST00000639895 PI4KAP1Q8N8J0 262 aa12.69□□□□□ -0.38
SPIN3-231ENST00000639895 TTC14Q96N46 770 aa12.69□□□□□ -0.38
SPIN3-231ENST00000639895 TRAF1Q13077 416 aa12.68□□□□□ -0.38
SPIN3-231ENST00000639895 RESTQ13127 1097 aa12.68□□□□□ -0.38
SPIN3-231ENST00000639895 SEPT7Q16181 437 aaKnown RBP12.68□□□□□ -0.38
SPIN3-231ENST00000639895 RUFY4Q6ZNE9 571 aa12.68□□□□□ -0.38
SPIN3-231ENST00000639895 DPF2Q92785 391 aa12.68□□□□□ -0.38
SPIN3-231ENST00000639895 HAUS2Q9NVX0 235 aa12.68□□□□□ -0.38
SPIN3-231ENST00000639895 TAB2Q9NYJ8 693 aa12.68□□□□□ -0.38
SPIN3-231ENST00000639895 NOP53Q9NZM5 478 aaKnown RBP12.68□□□□□ -0.38
SPIN3-231ENST00000639895 SBNO1A3KN83 1393 aa12.68□□□□□ -0.38
SPIN3-231ENST00000639895 KCNJ6P48051 423 aa12.68□□□□□ -0.38
SPIN3-231ENST00000639895 CEP128Q6ZU80 1094 aa12.68□□□□□ -0.38
SPIN3-231ENST00000639895 CLIC4Q9Y696 253 aa12.68□□□□□ -0.38
SPIN3-231ENST00000639895 NCKAP5LQ9HCH0 1330 aa12.68□□□□□ -0.38
SPIN3-231ENST00000639895 SRGAP2O75044 1071 aa12.68□□□□□ -0.38
SPIN3-231ENST00000639895 SLC7A5Q01650 507 aa12.68□□□□□ -0.38
SPIN3-231ENST00000639895 GBP5Q96PP8 586 aa12.68□□□□□ -0.38
SPIN3-231ENST00000639895 LLPHQ9BRT6 129 aaKnown RBP12.68□□□□□ -0.38
SPIN3-231ENST00000639895 FAM184BQ9ULE4 1060 aa12.68□□□□□ -0.38
SPIN3-231ENST00000639895 USH1CQ9Y6N9 552 aa12.68□□□□□ -0.38
SPIN3-231ENST00000639895 GUCY1A3Q02108 690 aa12.67□□□□□ -0.38
SPIN3-231ENST00000639895 C2orf54Q08AI8 447 aa12.67□□□□□ -0.38
SPIN3-231ENST00000639895 PLEKHO1Q53GL0 409 aaPredicted RBP12.67□□□□□ -0.38
SPIN3-231ENST00000639895 SH2D3CQ8N5H7 860 aa12.67□□□□□ -0.38
SPIN3-231ENST00000639895 IL17RAQ96F46 866 aa12.67□□□□□ -0.38
SPIN3-231ENST00000639895 SGSM3Q96HU1 749 aa12.67□□□□□ -0.38
SPIN3-231ENST00000639895 SLC40A1Q9NP59 571 aa12.67□□□□□ -0.38
SPIN3-231ENST00000639895 MAPK8IP1Q9UQF2 711 aa12.67□□□□□ -0.38
SPIN3-231ENST00000639895 A0A0G2JS52 829 aa12.67□□□□□ -0.38
SPIN3-231ENST00000639895 PFKFB2O60825 505 aa12.67□□□□□ -0.38
SPIN3-231ENST00000639895 GBP1P32455 592 aa12.67□□□□□ -0.38
SPIN3-231ENST00000639895 RBL2Q08999 1139 aa12.67□□□□□ -0.38
SPIN3-231ENST00000639895 FAM133BQ5BKY9 247 aaKnown RBP12.67□□□□□ -0.38
SPIN3-231ENST00000639895 NBPF14Q5TI25 921 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms