RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 GOLGA8QA0A0J9YX86 632 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 GOLGA8OA6NCC3 632 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 HNRNPCL2B2RXH8 293 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 GOLGA8NF8WBI6 632 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 GRM8O00222 908 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 GNPATO15228 680 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 HNRNPCL1O60812 293 aaKnown RBP6.16□□□□□ -1.42
SCN1A-209ENST00000635750 TMOD1P28289 359 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 ALDH1B1P30837 517 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 NBPF1Q3BBV0 1214 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 BRPF3Q9ULD4 1205 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 IL2RBP14784 551 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 ZBTB33Q86T24 672 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 SYCE1Q8N0S2 351 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 KRT222Q8N1A0 295 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 FAM76AQ8TAV0 307 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 ZFP91Q96JP5 570 aaPredicted RBP6.16□□□□□ -1.42
SCN1A-209ENST00000635750 NOC4LQ9BVI4 516 aaKnown RBP6.16□□□□□ -1.42
SCN1A-209ENST00000635750 BACH2Q9BYV9 841 aa6.16□□□□□ -1.42
SCN1A-209ENST00000635750 CPSF2Q9P2I0 782 aaKnown RBP6.16□□□□□ -1.42
SCN1A-209ENST00000635750 UFL1O94874 794 aa6.15□□□□□ -1.42
SCN1A-209ENST00000635750 NFKBIAP25963 317 aa6.15□□□□□ -1.42
SCN1A-209ENST00000635750 PHBP35232 272 aa6.15□□□□□ -1.42
SCN1A-209ENST00000635750 COG7P83436 770 aa6.15□□□□□ -1.42
SCN1A-209ENST00000635750 PDE1CQ14123 709 aaPredicted RBP6.15□□□□□ -1.42
SCN1A-209ENST00000635750 CHRNA2Q15822 529 aa6.15□□□□□ -1.42
SCN1A-209ENST00000635750 LETM2Q2VYF4 491 aa6.15□□□□□ -1.42
SCN1A-209ENST00000635750 DCPSQ96C86 337 aaKnown RBP6.15□□□□□ -1.42
SCN1A-209ENST00000635750 OLA1Q9NTK5 396 aaKnown RBP6.15□□□□□ -1.42
SCN1A-209ENST00000635750 DNAI1Q9UI46 699 aa6.15□□□□□ -1.42
SCN1A-209ENST00000635750 DNM3Q9UQ16 869 aa6.15□□□□□ -1.42
SCN1A-209ENST00000635750 USTQ9Y2C2 406 aa6.15□□□□□ -1.42
SCN1A-209ENST00000635750 ORC6Q9Y5N6 252 aa6.15□□□□□ -1.42
SCN1A-209ENST00000635750 DHX29Q7Z478 1369 aaKnown RBP6.15□□□□□ -1.42
SCN1A-209ENST00000635750 TRIM14Q14142 442 aa6.15□□□□□ -1.42
SCN1A-209ENST00000635750 NONOQ15233 471 aaKnown RBP eCLIP6.15□□□□□ -1.42
SCN1A-209ENST00000635750 NLRX1Q86UT6 975 aa6.15□□□□□ -1.42
SCN1A-209ENST00000635750 GLG1Q92896 1179 aa6.15□□□□□ -1.42
SCN1A-209ENST00000635750 TRERF1Q96PN7 1200 aa6.15□□□□□ -1.42
SCN1A-209ENST00000635750 THUMPD2Q9BTF0 503 aaKnown RBP6.15□□□□□ -1.42
SCN1A-209ENST00000635750 LMTK3Q96Q04 1460 aa6.15□□□□□ -1.42
SCN1A-209ENST00000635750 RNF8O76064 485 aa6.15□□□□□ -1.42
SCN1A-209ENST00000635750 TBC1D8O95759 1140 aa6.15□□□□□ -1.42
SCN1A-209ENST00000635750 ZSCAN22P10073 491 aaPredicted RBP6.15□□□□□ -1.42
SCN1A-209ENST00000635750 RASSF2P50749 326 aa6.15□□□□□ -1.42
SCN1A-209ENST00000635750 TSNAXIP1Q2TAA8 658 aa6.15□□□□□ -1.42
SCN1A-209ENST00000635750 ARHGEF16Q5VV41 709 aa6.15□□□□□ -1.42
SCN1A-209ENST00000635750 RYBPQ8N488 228 aaPredicted RBP6.15□□□□□ -1.42
SCN1A-209ENST00000635750 P3H4Q92791 437 aa6.15□□□□□ -1.42
SCN1A-209ENST00000635750 IWS1Q96ST2 819 aa6.15□□□□□ -1.42
SCN1A-209ENST00000635750 AKNAQ7Z591 1439 aa6.15□□□□□ -1.42
SCN1A-209ENST00000635750 DDX39AO00148 427 aaKnown RBP6.15□□□□□ -1.43
SCN1A-209ENST00000635750 SPTLC2O15270 562 aa6.15□□□□□ -1.43
SCN1A-209ENST00000635750 CD19P15391 556 aa6.15□□□□□ -1.43
SCN1A-209ENST00000635750 NXNQ6DKJ4 435 aa6.15□□□□□ -1.43
SCN1A-209ENST00000635750 DPP8Q6V1X1 898 aaPredicted RBP6.15□□□□□ -1.43
SCN1A-209ENST00000635750 NBPF11Q86T75 865 aa6.15□□□□□ -1.43
SCN1A-209ENST00000635750 SCYL1Q96KG9 808 aa6.15□□□□□ -1.43
SCN1A-209ENST00000635750 MLXIPQ9HAP2 919 aa6.15□□□□□ -1.43
SCN1A-209ENST00000635750 IRS4O14654 1257 aaPredicted RBP6.15□□□□□ -1.43
SCN1A-209ENST00000635750 GCNT3O95395 438 aa6.15□□□□□ -1.43
SCN1A-209ENST00000635750 TNNI1P19237 187 aa6.15□□□□□ -1.43
SCN1A-209ENST00000635750 PPP4R4Q6NUP7 873 aa6.15□□□□□ -1.43
SCN1A-209ENST00000635750 BRAPQ7Z569 592 aa6.15□□□□□ -1.43
SCN1A-209ENST00000635750 ZBTB8OSQ8IWT0 167 aa6.15□□□□□ -1.43
SCN1A-209ENST00000635750 MYCT1Q8N699 235 aa6.15□□□□□ -1.43
SCN1A-209ENST00000635750 POMGNT1Q8WZA1 660 aa6.15□□□□□ -1.43
SCN1A-209ENST00000635750 PRIMPOLQ96LW4 560 aa6.15□□□□□ -1.43
SCN1A-209ENST00000635750 MRPL44Q9H9J2 332 aaKnown RBP6.15□□□□□ -1.43
SCN1A-209ENST00000635750 ASIC3Q9UHC3 531 aa6.15□□□□□ -1.43
SCN1A-209ENST00000635750 CD109Q6YHK3 1445 aa6.15□□□□□ -1.43
SCN1A-209ENST00000635750 TNNC2P02585 160 aa6.15□□□□□ -1.43
SCN1A-209ENST00000635750 CAPN2P17655 700 aa6.15□□□□□ -1.43
SCN1A-209ENST00000635750 MAEAQ7L5Y9 396 aa6.15□□□□□ -1.43
SCN1A-209ENST00000635750 MIGA1Q8NAN2 632 aa6.15□□□□□ -1.43
SCN1A-209ENST00000635750 PARP2Q9UGN5 583 aa6.15□□□□□ -1.43
SCN1A-209ENST00000635750 SLC12A6Q9UHW9 1150 aa6.15□□□□□ -1.43
SCN1A-209ENST00000635750 ANGPTL3Q9Y5C1 460 aa6.15□□□□□ -1.43
SCN1A-209ENST00000635750 EFCAB5A4FU69 1503 aa6.15□□□□□ -1.43
SCN1A-209ENST00000635750 SPECC1L-ADORA2AF8WAN1 911 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 ZYXQ15942 572 aaKnown RBP6.14□□□□□ -1.43
SCN1A-209ENST00000635750 CCDC122Q5T0U0 273 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 GADL1Q6ZQY3 521 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 BRF1Q92994 677 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 CCDC124Q96CT7 223 aaKnown RBP6.14□□□□□ -1.43
SCN1A-209ENST00000635750 SLC13A4Q9UKG4 626 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 A6NNZ2 444 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 TXNDC9O14530 226 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 PPFIA4O75335 1185 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 SKILP12757 684 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 PRKG1Q13976 671 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 DBN1Q16643 649 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 TUBB8Q3ZCM7 444 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 ACBD5Q5T8D3 534 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-209ENST00000635750 TTLL7Q6ZT98 887 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 NME9Q86XW9 330 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 MCF2L2Q86YR7 1114 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 AOPEPQ8N6M6 819 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 XAGE3Q8WTP9 111 aa6.14□□□□□ -1.43
SCN1A-209ENST00000635750 LZTS2Q9BRK4 669 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms