RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-208ENST00000634348 HNRNPCL1O60812 293 aaKnown RBP12.6□□□□□ -0.39
SRSF4-208ENST00000634348 SKIP12755 728 aa12.6□□□□□ -0.39
SRSF4-208ENST00000634348 HDAC1Q13547 482 aaPredicted RBP12.6□□□□□ -0.39
SRSF4-208ENST00000634348 DHX29Q7Z478 1369 aaKnown RBP12.6□□□□□ -0.39
SRSF4-208ENST00000634348 RIOK3O14730 519 aaKnown RBP12.6□□□□□ -0.39
SRSF4-208ENST00000634348 ARHGAP44Q17R89 818 aa12.6□□□□□ -0.39
SRSF4-208ENST00000634348 ATP6V0A1Q93050 837 aa12.6□□□□□ -0.39
SRSF4-208ENST00000634348 PKD2L1Q9P0L9 805 aa12.6□□□□□ -0.39
SRSF4-208ENST00000634348 CUX1P39880 1505 aa12.6□□□□□ -0.39
SRSF4-208ENST00000634348 SPZ1Q9BXG8 430 aa12.6□□□□□ -0.39
SRSF4-208ENST00000634348 TXLNGQ9NUQ3 528 aa12.6□□□□□ -0.39
SRSF4-208ENST00000634348 EPS15L1Q9UBC2 864 aa12.6□□□□□ -0.39
SRSF4-208ENST00000634348 AFG3L2Q9Y4W6 797 aa12.6□□□□□ -0.39
SRSF4-208ENST00000634348 BAG3O95817 575 aa12.59□□□□□ -0.39
SRSF4-208ENST00000634348 LGSNQ5TDP6 509 aa12.59□□□□□ -0.39
SRSF4-208ENST00000634348 SLC4A4Q9Y6R1 1079 aa12.59□□□□□ -0.39
SRSF4-208ENST00000634348 ZSCAN22P10073 491 aaPredicted RBP12.59□□□□□ -0.39
SRSF4-208ENST00000634348 SDSP20132 328 aa12.59□□□□□ -0.39
SRSF4-208ENST00000634348 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.59□□□□□ -0.39
SRSF4-208ENST00000634348 PPP4R1Q8TF05 950 aa12.59□□□□□ -0.39
SRSF4-208ENST00000634348 RRP15Q9Y3B9 282 aaKnown RBP12.59□□□□□ -0.39
SRSF4-208ENST00000634348 MCM7P33993 719 aa12.59□□□□□ -0.39
SRSF4-208ENST00000634348 ELF2Q15723 593 aa12.59□□□□□ -0.39
SRSF4-208ENST00000634348 RSBN1LQ6PCB5 846 aaPredicted RBP12.59□□□□□ -0.39
SRSF4-208ENST00000634348 RPS6KA2Q15349 733 aa12.59□□□□□ -0.39
SRSF4-208ENST00000634348 TAF11Q15544 211 aa12.59□□□□□ -0.39
SRSF4-208ENST00000634348 GFM2Q969S9 779 aaKnown RBP12.59□□□□□ -0.39
SRSF4-208ENST00000634348 KRT7P08729 469 aa12.59□□□□□ -0.39
SRSF4-208ENST00000634348 SLC39A6Q13433 755 aa12.59□□□□□ -0.39
SRSF4-208ENST00000634348 E2F4Q16254 413 aa12.59□□□□□ -0.39
SRSF4-208ENST00000634348 NBPF20Q3BBV1 942 aa12.59□□□□□ -0.39
SRSF4-208ENST00000634348 PHBP35232 272 aa12.59□□□□□ -0.39
SRSF4-208ENST00000634348 E2F5Q15329 346 aa12.59□□□□□ -0.39
SRSF4-208ENST00000634348 NAPGQ99747 312 aaPredicted RBP12.59□□□□□ -0.39
SRSF4-208ENST00000634348 HAUS7Q99871 368 aa12.59□□□□□ -0.39
SRSF4-208ENST00000634348 UTP14AQ9BVJ6 771 aaKnown RBP12.59□□□□□ -0.39
SRSF4-208ENST00000634348 RHOBTB1O94844 696 aa12.59□□□□□ -0.39
SRSF4-208ENST00000634348 HLA-DOAP06340 250 aa12.59□□□□□ -0.39
SRSF4-208ENST00000634348 TTC4O95801 387 aa12.58□□□□□ -0.39
SRSF4-208ENST00000634348 CWF19L2Q2TBE0 894 aaKnown RBP12.58□□□□□ -0.39
SRSF4-208ENST00000634348 DTNBP1Q96EV8 351 aa12.58□□□□□ -0.39
SRSF4-208ENST00000634348 LRGUKQ96M69 825 aa12.58□□□□□ -0.39
SRSF4-208ENST00000634348 MEIS3Q99687 375 aa12.58□□□□□ -0.39
SRSF4-208ENST00000634348 DDX28Q9NUL7 540 aaKnown RBP12.58□□□□□ -0.39
SRSF4-208ENST00000634348 ARHGAP4P98171 946 aa12.58□□□□□ -0.4
SRSF4-208ENST00000634348 DENND2CQ68D51 928 aa12.58□□□□□ -0.4
SRSF4-208ENST00000634348 CNGA4Q8IV77 575 aa12.58□□□□□ -0.4
SRSF4-208ENST00000634348 UTP6Q9NYH9 597 aaKnown RBP12.58□□□□□ -0.4
SRSF4-208ENST00000634348 PA2G4Q9UQ80 394 aaKnown RBP12.58□□□□□ -0.4
SRSF4-208ENST00000634348 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.58□□□□□ -0.4
SRSF4-208ENST00000634348 IGF1RP08069 1367 aa12.58□□□□□ -0.4
SRSF4-208ENST00000634348 HARSP12081 509 aaKnown RBP12.58□□□□□ -0.4
SRSF4-208ENST00000634348 PRIM1P49642 420 aaKnown RBP12.58□□□□□ -0.4
SRSF4-208ENST00000634348 RTN1Q16799 776 aa12.58□□□□□ -0.4
SRSF4-208ENST00000634348 MIGA1Q8NAN2 632 aa12.58□□□□□ -0.4
SRSF4-208ENST00000634348 KCNH5Q8NCM2 988 aa12.58□□□□□ -0.4
SRSF4-208ENST00000634348 MPHOSPH6Q99547 160 aaKnown RBP12.58□□□□□ -0.4
SRSF4-208ENST00000634348 MAP3K7O43318 606 aa12.58□□□□□ -0.4
SRSF4-208ENST00000634348 RFC4P35249 363 aa12.58□□□□□ -0.4
SRSF4-208ENST00000634348 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.58□□□□□ -0.4
SRSF4-208ENST00000634348 EEF1B2P24534 225 aaKnown RBP12.58□□□□□ -0.4
SRSF4-208ENST00000634348 NAPAP54920 295 aa12.58□□□□□ -0.4
SRSF4-208ENST00000634348 GNGT1P63211 74 aa12.58□□□□□ -0.4
SRSF4-208ENST00000634348 SLF2Q8IX21 1173 aa12.58□□□□□ -0.4
SRSF4-208ENST00000634348 ZKSCAN3Q9BRR0 538 aa12.58□□□□□ -0.4
SRSF4-208ENST00000634348 ARIH1Q9Y4X5 557 aaPredicted RBP12.58□□□□□ -0.4
SRSF4-208ENST00000634348 NKTRP30414 1462 aaKnown RBP12.57□□□□□ -0.4
SRSF4-208ENST00000634348 FGD5Q6ZNL6 1462 aa12.57□□□□□ -0.4
SRSF4-208ENST00000634348 TMEM232C9JQI7 657 aa12.57□□□□□ -0.4
SRSF4-208ENST00000634348 PIP4K2CQ8TBX8 421 aa12.57□□□□□ -0.4
SRSF4-208ENST00000634348 NBPF7P0C2Y1 421 aaPredicted RBP12.57□□□□□ -0.4
SRSF4-208ENST00000634348 UBXN1Q04323 297 aa12.57□□□□□ -0.4
SRSF4-208ENST00000634348 PALM2Q8IXS6 379 aa12.57□□□□□ -0.4
SRSF4-208ENST00000634348 NME8Q8N427 588 aa12.57□□□□□ -0.4
SRSF4-208ENST00000634348 SPC25Q9HBM1 224 aa12.57□□□□□ -0.4
SRSF4-208ENST00000634348 RBM8AQ9Y5S9 174 aaKnown RBP12.57□□□□□ -0.4
SRSF4-208ENST00000634348 C9orf84Q5VXU9 1444 aa12.57□□□□□ -0.4
SRSF4-208ENST00000634348 H0YC42 278 aa12.57□□□□□ -0.4
SRSF4-208ENST00000634348 PPP2R5CQ13362 524 aa12.57□□□□□ -0.4
SRSF4-208ENST00000634348 CAPS2Q9BXY5 557 aa12.57□□□□□ -0.4
SRSF4-208ENST00000634348 STMN3Q9NZ72 180 aa12.57□□□□□ -0.4
SRSF4-208ENST00000634348 GTPBP10A4D1E9 387 aaKnown RBP12.57□□□□□ -0.4
SRSF4-208ENST00000634348 EXOC5O00471 708 aa12.57□□□□□ -0.4
SRSF4-208ENST00000634348 MCF2LO15068 1137 aa12.57□□□□□ -0.4
SRSF4-208ENST00000634348 STX2P32856 288 aa12.57□□□□□ -0.4
SRSF4-208ENST00000634348 IRX1P78414 480 aaPredicted RBP12.57□□□□□ -0.4
SRSF4-208ENST00000634348 PPP2R5DQ14738 602 aa12.57□□□□□ -0.4
SRSF4-208ENST00000634348 TTC22Q5TAA0 569 aa12.57□□□□□ -0.4
SRSF4-208ENST00000634348 MCTP2Q6DN12 878 aa12.57□□□□□ -0.4
SRSF4-208ENST00000634348 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.57□□□□□ -0.4
SRSF4-208ENST00000634348 PAK2Q13177 524 aa12.57□□□□□ -0.4
SRSF4-208ENST00000634348 RASA3Q14644 834 aa12.57□□□□□ -0.4
SRSF4-208ENST00000634348 TLK2Q86UE8 772 aa12.57□□□□□ -0.4
SRSF4-208ENST00000634348 OPTNQ96CV9 577 aa12.57□□□□□ -0.4
SRSF4-208ENST00000634348 TRPA1O75762 1119 aa12.57□□□□□ -0.4
SRSF4-208ENST00000634348 DEUP1Q05D60 604 aa12.57□□□□□ -0.4
SRSF4-208ENST00000634348 MRPL28Q13084 256 aaKnown RBP12.57□□□□□ -0.4
SRSF4-208ENST00000634348 CDC5LQ99459 802 aaKnown RBP12.57□□□□□ -0.4
SRSF4-208ENST00000634348 ZSCAN16Q9H4T2 348 aaPredicted RBP12.57□□□□□ -0.4
SRSF4-208ENST00000634348 NAIPQ13075 1403 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms