RNA–Protein interactions for RNA: ENST00000626793.2

UBE3A-213, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-213	ENST00000626793	PROCA1	Q8NCQ7	364 aa	Predicted RBP	27.95	■■■□□ 2.06
UBE3A-213	ENST00000626793	ZNF280C	Q8ND82	737 aa		27.95	■■■□□ 2.06
UBE3A-213	ENST00000626793	XAGE2	Q96GT9	111 aa		27.95	■■■□□ 2.06
UBE3A-213	ENST00000626793	HMGCR	P04035	888 aa		27.94	■■■□□ 2.06
UBE3A-213	ENST00000626793	SYN1	P17600	705 aa		27.94	■■■□□ 2.06
UBE3A-213	ENST00000626793	SLFN5	Q08AF3	891 aa		27.94	■■■□□ 2.06
UBE3A-213	ENST00000626793	TBC1D9	Q6ZT07	1266 aa		27.94	■■■□□ 2.06
UBE3A-213	ENST00000626793	ASCC2	Q9H1I8	757 aa	Predicted RBP	27.94	■■■□□ 2.06
UBE3A-213	ENST00000626793	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	27.94	■■■□□ 2.06
UBE3A-213	ENST00000626793	MYH13	Q9UKX3	1938 aa		27.93	■■■□□ 2.06
UBE3A-213	ENST00000626793		A0A1B0GUL7	405 aa		27.93	■■■□□ 2.06
UBE3A-213	ENST00000626793	ZBTB22	O15209	634 aa		27.93	■■■□□ 2.06
UBE3A-213	ENST00000626793	GCLC	P48506	637 aa	Predicted RBP	27.93	■■■□□ 2.06
UBE3A-213	ENST00000626793	MNX1	P50219	401 aa	Predicted RBP	27.93	■■■□□ 2.06
UBE3A-213	ENST00000626793	TFCP2	Q12800	502 aa		27.93	■■■□□ 2.06
UBE3A-213	ENST00000626793	CDCA7L	Q96GN5	454 aa		27.93	■■■□□ 2.06
UBE3A-213	ENST00000626793	OSBPL5	Q9H0X9	879 aa	Predicted RBP	27.93	■■■□□ 2.06
UBE3A-213	ENST00000626793	HMX1	Q9NP08	348 aa	Predicted RBP	27.93	■■■□□ 2.06
UBE3A-213	ENST00000626793	NOB1	Q9ULX3	412 aa	Known RBP	27.93	■■■□□ 2.06
UBE3A-213	ENST00000626793	RPTOR	Q8N122	1335 aa		27.92	■■■□□ 2.06
UBE3A-213	ENST00000626793	PEX10	O60683	326 aa		27.92	■■■□□ 2.06
UBE3A-213	ENST00000626793	BMP8B	P34820	402 aa		27.92	■■■□□ 2.06
UBE3A-213	ENST00000626793	PI16	Q6UXB8	463 aa		27.92	■■■□□ 2.06
UBE3A-213	ENST00000626793	ANKLE1	Q8NAG6	615 aa		27.92	■■■□□ 2.06
UBE3A-213	ENST00000626793	NBPF3	Q9H094	633 aa		27.92	■■■□□ 2.06
UBE3A-213	ENST00000626793	PDS5A	Q29RF7	1337 aa	Known RBP	27.92	■■■□□ 2.06
UBE3A-213	ENST00000626793		Q7L0L9	218 aa		27.91	■■■□□ 2.06
UBE3A-213	ENST00000626793	NEUROD6	Q96NK8	337 aa		27.91	■■■□□ 2.06
UBE3A-213	ENST00000626793	MEIS3	Q99687	375 aa		27.91	■■■□□ 2.06
UBE3A-213	ENST00000626793	DOCK2	Q92608	1830 aa		27.9	■■■□□ 2.06
UBE3A-213	ENST00000626793	CYP2B6	P20813	491 aa		27.9	■■■□□ 2.06
UBE3A-213	ENST00000626793	CAP2	P40123	477 aa		27.9	■■■□□ 2.06
UBE3A-213	ENST00000626793	PABPC4	Q13310	644 aa	Known RBP eCLIP	27.9	■■■□□ 2.06
UBE3A-213	ENST00000626793	DEFB123	Q8N688	67 aa		27.9	■■■□□ 2.06
UBE3A-213	ENST00000626793	HMG20B	Q9P0W2	317 aa		27.9	■■■□□ 2.06
UBE3A-213	ENST00000626793	USP17L5	A8MUK1	530 aa		27.89	■■■□□ 2.06
UBE3A-213	ENST00000626793	NPM3	O75607	178 aa	Known RBP	27.89	■■■□□ 2.06
UBE3A-213	ENST00000626793	MVP	Q14764	893 aa	Known RBP	27.89	■■■□□ 2.06
UBE3A-213	ENST00000626793	TRIB2	Q92519	343 aa		27.89	■■■□□ 2.06
UBE3A-213	ENST00000626793	NSUN4	Q96CB9	384 aa	Known RBP	27.89	■■■□□ 2.06
UBE3A-213	ENST00000626793	C11orf49	Q9H6J7	331 aa		27.89	■■■□□ 2.06
UBE3A-213	ENST00000626793	MYH2	Q9UKX2	1941 aa		27.88	■■■□□ 2.05
UBE3A-213	ENST00000626793	MAGEA10	P43363	369 aa	Predicted RBP	27.88	■■■□□ 2.05
UBE3A-213	ENST00000626793	RAI14	Q9P0K7	980 aa		27.88	■■■□□ 2.05
UBE3A-213	ENST00000626793	AKAP2	Q9Y2D5	859 aa		27.88	■■■□□ 2.05
UBE3A-213	ENST00000626793	P2RX7	Q99572	595 aa	Known RBP	27.87	■■■□□ 2.05
UBE3A-213	ENST00000626793	PHIP	Q8WWQ0	1821 aa		27.86	■■■□□ 2.05
UBE3A-213	ENST00000626793	LDHC	P07864	332 aa		27.86	■■■□□ 2.05
UBE3A-213	ENST00000626793	JAG1	P78504	1218 aa		27.86	■■■□□ 2.05
UBE3A-213	ENST00000626793	SH3D19	Q5HYK7	790 aa		27.86	■■■□□ 2.05
UBE3A-213	ENST00000626793	SPATA5	Q8NB90	893 aa		27.86	■■■□□ 2.05
UBE3A-213	ENST00000626793	OGDHL	Q9ULD0	1010 aa		27.86	■■■□□ 2.05
UBE3A-213	ENST00000626793	HDAC5	Q9UQL6	1122 aa		27.86	■■■□□ 2.05
UBE3A-213	ENST00000626793	DOCK1	Q14185	1865 aa		27.86	■■■□□ 2.05
UBE3A-213	ENST00000626793	SRGAP3	O43295	1099 aa		27.85	■■■□□ 2.05
UBE3A-213	ENST00000626793	GSTO1	P78417	241 aa		27.85	■■■□□ 2.05
UBE3A-213	ENST00000626793	MTMR2	Q13614	643 aa		27.85	■■■□□ 2.05
UBE3A-213	ENST00000626793	TEX11	Q8IYF3	940 aa		27.85	■■■□□ 2.05
UBE3A-213	ENST00000626793	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	27.85	■■■□□ 2.05
UBE3A-213	ENST00000626793	MORF4L1	Q9UBU8	362 aa		27.85	■■■□□ 2.05
UBE3A-213	ENST00000626793	PRKAR2A	P13861	404 aa	Known RBP	27.84	■■■□□ 2.05
UBE3A-213	ENST00000626793	GORAB	Q5T7V8	394 aa		27.84	■■■□□ 2.05
UBE3A-213	ENST00000626793	TBC1D2	Q9BYX2	928 aa		27.84	■■■□□ 2.05
UBE3A-213	ENST00000626793	AS3MT	Q9HBK9	375 aa		27.84	■■■□□ 2.05
UBE3A-213	ENST00000626793	TXNRD2	Q9NNW7	524 aa		27.84	■■■□□ 2.05
UBE3A-213	ENST00000626793	PTPRF	P10586	1907 aa		27.83	■■■□□ 2.05
UBE3A-213	ENST00000626793	IRX3	P78415	501 aa	Predicted RBP	27.83	■■■□□ 2.05
UBE3A-213	ENST00000626793	SHROOM1	Q2M3G4	852 aa	Predicted RBP	27.83	■■■□□ 2.05
UBE3A-213	ENST00000626793	MAP3K21	Q5TCX8	1036 aa		27.83	■■■□□ 2.05
UBE3A-213	ENST00000626793	API5	Q9BZZ5	524 aa	Known RBP	27.83	■■■□□ 2.05
UBE3A-213	ENST00000626793	DOCK3	Q8IZD9	2030 aa		27.82	■■■□□ 2.04
UBE3A-213	ENST00000626793	MAP4K4	O95819	1239 aa	Predicted RBP	27.82	■■■□□ 2.04
UBE3A-213	ENST00000626793	BACE1	P56817	501 aa		27.82	■■■□□ 2.04
UBE3A-213	ENST00000626793	LRIT3	Q3SXY7	679 aa		27.82	■■■□□ 2.04
UBE3A-213	ENST00000626793	GPR153	Q6NV75	609 aa		27.82	■■■□□ 2.04
UBE3A-213	ENST00000626793	TDH	Q8IZJ6	230 aa		27.82	■■■□□ 2.04
UBE3A-213	ENST00000626793	UBE2O	Q9C0C9	1292 aa	Known RBP	27.82	■■■□□ 2.04
UBE3A-213	ENST00000626793	HERC5	Q9UII4	1024 aa	Known RBP	27.82	■■■□□ 2.04
UBE3A-213	ENST00000626793	PFAS	O15067	1338 aa		27.82	■■■□□ 2.04
UBE3A-213	ENST00000626793	GPRC5A	Q8NFJ5	357 aa		27.81	■■■□□ 2.04
UBE3A-213	ENST00000626793	NUDT12	Q9BQG2	462 aa		27.81	■■■□□ 2.04
UBE3A-213	ENST00000626793	WDR18	Q9BV38	432 aa		27.81	■■■□□ 2.04
UBE3A-213	ENST00000626793	LRP2BP	Q9P2M1	347 aa		27.81	■■■□□ 2.04
UBE3A-213	ENST00000626793	PI4KB	Q9UBF8	816 aa		27.81	■■■□□ 2.04
UBE3A-213	ENST00000626793		Q3C1V9	767 aa		27.8	■■■□□ 2.04
UBE3A-213	ENST00000626793	TMOD4	Q9NZQ9	345 aa		27.8	■■■□□ 2.04
UBE3A-213	ENST00000626793	RBPJL	Q9UBG7	517 aa		27.8	■■■□□ 2.04
UBE3A-213	ENST00000626793	ALPK3	Q96L96	1907 aa		27.8	■■■□□ 2.04
UBE3A-213	ENST00000626793	HOXA7	P31268	230 aa	Predicted RBP	27.79	■■■□□ 2.04
UBE3A-213	ENST00000626793	MCAM	P43121	646 aa		27.79	■■■□□ 2.04
UBE3A-213	ENST00000626793	HERVK_113	P62684	666 aa		27.79	■■■□□ 2.04
UBE3A-213	ENST00000626793	CACNB2	Q08289	660 aa	Predicted RBP	27.79	■■■□□ 2.04
UBE3A-213	ENST00000626793	TRMT2A	Q8IZ69	625 aa	Known RBP	27.79	■■■□□ 2.04
UBE3A-213	ENST00000626793	MTMR10	Q9NXD2	777 aa		27.79	■■■□□ 2.04
UBE3A-213	ENST00000626793	AATF	Q9NY61	560 aa	Known RBP eCLIP	27.79	■■■□□ 2.04
UBE3A-213	ENST00000626793	UNC80	Q8N2C7	3258 aa		27.79	■■■□□ 2.04
UBE3A-213	ENST00000626793	CCL14	Q16627	93 aa		27.78	■■■□□ 2.04
UBE3A-213	ENST00000626793	SNRK	Q9NRH2	765 aa		27.78	■■■□□ 2.04
UBE3A-213	ENST00000626793	STXBP5L	Q9Y2K9	1186 aa		27.78	■■■□□ 2.04
UBE3A-213	ENST00000626793	GDF11	O95390	407 aa		27.77	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms