RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 CYP2C19P33261 490 aa18.04■□□□□ 0.48
NPHP4-211ENST00000622020 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.04■□□□□ 0.48
NPHP4-211ENST00000622020 SAFBQ15424 915 aaKnown RBP eCLIP18.03■□□□□ 0.48
NPHP4-211ENST00000622020 CC2D1AQ6P1N0 951 aaPredicted RBP18.03■□□□□ 0.48
NPHP4-211ENST00000622020 ASAP1Q9ULH1 1129 aa18.03■□□□□ 0.48
NPHP4-211ENST00000622020 IRX5P78411 483 aaPredicted RBP18.03■□□□□ 0.48
NPHP4-211ENST00000622020 MDM2Q00987 491 aaPredicted RBP18.03■□□□□ 0.48
NPHP4-211ENST00000622020 TAF3Q5VWG9 929 aa18.03■□□□□ 0.48
NPHP4-211ENST00000622020 ISCA1Q9BUE6 129 aa18.03■□□□□ 0.48
NPHP4-211ENST00000622020 TEX13AQ9BXU3 409 aaPredicted RBP18.03■□□□□ 0.48
NPHP4-211ENST00000622020 PRDM11Q9NQV5 511 aa18.03■□□□□ 0.48
NPHP4-211ENST00000622020 ATG3Q9NT62 314 aa18.03■□□□□ 0.48
NPHP4-211ENST00000622020 TBC1D2BQ9UPU7 963 aa18.03■□□□□ 0.48
NPHP4-211ENST00000622020 RIPOR2Q9Y4F9 1068 aa18.03■□□□□ 0.48
NPHP4-211ENST00000622020 A0A0G2JS52 829 aa18.02■□□□□ 0.48
NPHP4-211ENST00000622020 PDE4CQ08493 712 aa18.02■□□□□ 0.48
NPHP4-211ENST00000622020 MCM6Q14566 821 aa18.02■□□□□ 0.48
NPHP4-211ENST00000622020 SMC1AQ14683 1233 aaKnown RBP18.02■□□□□ 0.48
NPHP4-211ENST00000622020 WWC2Q6AWC2 1192 aa18.02■□□□□ 0.48
NPHP4-211ENST00000622020 EPSTI1Q96J88 318 aa18.02■□□□□ 0.48
NPHP4-211ENST00000622020 CSRNP2Q9H175 543 aa18.02■□□□□ 0.48
NPHP4-211ENST00000622020 EPB41L4AQ9HCS5 686 aaPredicted RBP18.02■□□□□ 0.48
NPHP4-211ENST00000622020 MAP3K9P80192 1104 aa18.02■□□□□ 0.48
NPHP4-211ENST00000622020 C1orf167Q5SNV9 1468 aa18.02■□□□□ 0.47
NPHP4-211ENST00000622020 PRDM1O75626 825 aa18.01■□□□□ 0.47
NPHP4-211ENST00000622020 ABL1P00519 1130 aa18.01■□□□□ 0.47
NPHP4-211ENST00000622020 KIF6Q6ZMV9 814 aa18.01■□□□□ 0.47
NPHP4-211ENST00000622020 IFNL3Q8IZI9 196 aa18.01■□□□□ 0.47
NPHP4-211ENST00000622020 TTLL11Q8NHH1 800 aa18.01■□□□□ 0.47
NPHP4-211ENST00000622020 STRBPQ96SI9 672 aaKnown RBP18.01■□□□□ 0.47
NPHP4-211ENST00000622020 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.01■□□□□ 0.47
NPHP4-211ENST00000622020 TDO2P48775 406 aa18.01■□□□□ 0.47
NPHP4-211ENST00000622020 SUGCTQ9HAC7 445 aa18.01■□□□□ 0.47
NPHP4-211ENST00000622020 ARFGAP3Q9NP61 516 aa18.01■□□□□ 0.47
NPHP4-211ENST00000622020 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.01■□□□□ 0.47
NPHP4-211ENST00000622020 RAI14Q9P0K7 980 aa18.01■□□□□ 0.47
NPHP4-211ENST00000622020 MRFAP1Q9Y605 127 aa18.01■□□□□ 0.47
NPHP4-211ENST00000622020 RBL2Q08999 1139 aa18.01■□□□□ 0.47
NPHP4-211ENST00000622020 MPHOSPH8Q99549 860 aa18.01■□□□□ 0.47
NPHP4-211ENST00000622020 SRRTQ9BXP5 876 aaKnown RBP18.01■□□□□ 0.47
NPHP4-211ENST00000622020 TRMT112Q9UI30 125 aaKnown RBP18.01■□□□□ 0.47
NPHP4-211ENST00000622020 FBXO2Q9UK22 296 aaPredicted RBP18.01■□□□□ 0.47
NPHP4-211ENST00000622020 MINDY4BA8MYZ0 360 aa18■□□□□ 0.47
NPHP4-211ENST00000622020 STX10O60499 249 aa18■□□□□ 0.47
NPHP4-211ENST00000622020 MMP1P03956 469 aa18■□□□□ 0.47
NPHP4-211ENST00000622020 CCT6AP40227 531 aaKnown RBP18■□□□□ 0.47
NPHP4-211ENST00000622020 ANKRD18BA2A2Z9 1011 aa18■□□□□ 0.47
NPHP4-211ENST00000622020 TBX2Q13207 712 aaPredicted RBP18■□□□□ 0.47
NPHP4-211ENST00000622020 RAD9BQ6WBX8 426 aa18■□□□□ 0.47
NPHP4-211ENST00000622020 MFSD6Q6ZSS7 791 aa18■□□□□ 0.47
NPHP4-211ENST00000622020 PLCD3Q8N3E9 789 aa18■□□□□ 0.47
NPHP4-211ENST00000622020 ZBTB38Q8NAP3 1195 aaPredicted RBP18■□□□□ 0.47
NPHP4-211ENST00000622020 HOOK1Q9UJC3 728 aaKnown RBP18■□□□□ 0.47
NPHP4-211ENST00000622020 PHRF1Q9P1Y6 1649 aaKnown RBP17.99■□□□□ 0.47
NPHP4-211ENST00000622020 RTN1Q16799 776 aa17.99■□□□□ 0.47
NPHP4-211ENST00000622020 TRIM22Q8IYM9 498 aa17.99■□□□□ 0.47
NPHP4-211ENST00000622020 KIFC2Q96AC6 838 aa17.99■□□□□ 0.47
NPHP4-211ENST00000622020 TMEM87BQ96K49 555 aa17.99■□□□□ 0.47
NPHP4-211ENST00000622020 VPS54Q9P1Q0 977 aa17.99■□□□□ 0.47
NPHP4-211ENST00000622020 TUBB4AP04350 444 aa17.99■□□□□ 0.47
NPHP4-211ENST00000622020 RHOXF2BP0C7M4 288 aa17.99■□□□□ 0.47
NPHP4-211ENST00000622020 CDC25AP30304 524 aa17.99■□□□□ 0.47
NPHP4-211ENST00000622020 ZNF569Q5MCW4 686 aa17.99■□□□□ 0.47
NPHP4-211ENST00000622020 IGSF22Q8N9C0 903 aa17.99■□□□□ 0.47
NPHP4-211ENST00000622020 RHOXF2Q9BQY4 288 aa17.99■□□□□ 0.47
NPHP4-211ENST00000622020 RNF216Q9NWF9 866 aaPredicted RBP17.99■□□□□ 0.47
NPHP4-211ENST00000622020 CALCOCO1Q9P1Z2 691 aa17.99■□□□□ 0.47
NPHP4-211ENST00000622020 A0A087X0B3 334 aa17.98■□□□□ 0.47
NPHP4-211ENST00000622020 IRS4O14654 1257 aaPredicted RBP17.98■□□□□ 0.47
NPHP4-211ENST00000622020 PCCAP05165 728 aaPredicted RBP17.98■□□□□ 0.47
NPHP4-211ENST00000622020 CD44P16070 742 aaKnown RBP17.98■□□□□ 0.47
NPHP4-211ENST00000622020 DHX8Q14562 1220 aaKnown RBP17.98■□□□□ 0.47
NPHP4-211ENST00000622020 NOM1Q5C9Z4 860 aaKnown RBP17.98■□□□□ 0.47
NPHP4-211ENST00000622020 MAPK8IP1Q9UQF2 711 aa17.98■□□□□ 0.47
NPHP4-211ENST00000622020 ZNF18P17022 549 aa17.98■□□□□ 0.47
NPHP4-211ENST00000622020 PTPREP23469 700 aa17.98■□□□□ 0.47
NPHP4-211ENST00000622020 EARS2Q5JPH6 523 aaKnown RBP17.98■□□□□ 0.47
NPHP4-211ENST00000622020 GPR161Q8N6U8 529 aaKnown RBP17.98■□□□□ 0.47
NPHP4-211ENST00000622020 AKR1B15C9JRZ8 316 aaPredicted RBP17.98■□□□□ 0.47
NPHP4-211ENST00000622020 PDE8BO95263 885 aa17.98■□□□□ 0.47
NPHP4-211ENST00000622020 FMNL1O95466 1100 aaPredicted RBP17.98■□□□□ 0.47
NPHP4-211ENST00000622020 WTAPQ15007 396 aa17.98■□□□□ 0.47
NPHP4-211ENST00000622020 PPFIBP1Q86W92 1011 aa17.98■□□□□ 0.47
NPHP4-211ENST00000622020 NUTM2AQ8IVF1 878 aaPredicted RBP17.98■□□□□ 0.47
NPHP4-211ENST00000622020 CDC5LQ99459 802 aaKnown RBP17.98■□□□□ 0.47
NPHP4-211ENST00000622020 BLZF1Q9H2G9 400 aa17.98■□□□□ 0.47
NPHP4-211ENST00000622020 PCDH11XQ9BZA7 1347 aa17.98■□□□□ 0.47
NPHP4-211ENST00000622020 PCDH11YQ9BZA8 1340 aa17.98■□□□□ 0.47
NPHP4-211ENST00000622020 WNT7AO00755 349 aa17.97■□□□□ 0.47
NPHP4-211ENST00000622020 CSF1RP07333 972 aa17.97■□□□□ 0.47
NPHP4-211ENST00000622020 CCDC175P0C221 793 aa17.97■□□□□ 0.47
NPHP4-211ENST00000622020 CASP14P31944 242 aa17.97■□□□□ 0.47
NPHP4-211ENST00000622020 LMAN1P49257 510 aa17.97■□□□□ 0.47
NPHP4-211ENST00000622020 MORC3Q14149 939 aa17.97■□□□□ 0.47
NPHP4-211ENST00000622020 LCORLQ8N3X6 602 aa17.97■□□□□ 0.47
NPHP4-211ENST00000622020 ACRBPQ8NEB7 543 aa17.97■□□□□ 0.47
NPHP4-211ENST00000622020 SLC4A4Q9Y6R1 1079 aa17.97■□□□□ 0.47
NPHP4-211ENST00000622020 PHACTR2O75167 634 aa17.97■□□□□ 0.47
NPHP4-211ENST00000622020 LONRF2Q1L5Z9 754 aa17.97■□□□□ 0.47
NPHP4-211ENST00000622020 KIF4BQ2VIQ3 1234 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms