RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 VPS41P49754 854 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 SELENOSQ9BQE4 189 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 RBM6P78332 1123 aaKnown RBP5.5□□□□□ -1.53
VPS13D-213ENST00000613099 C3orf20Q8ND61 904 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 MRPS27Q92552 414 aaKnown RBP5.5□□□□□ -1.53
VPS13D-213ENST00000613099 BIN1O00499 593 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 EIF2S2P20042 333 aaKnown RBP5.5□□□□□ -1.53
VPS13D-213ENST00000613099 CASP8Q14790 479 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 FERMT3Q86UX7 667 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 TDRD7Q8NHU6 1098 aaKnown RBP5.5□□□□□ -1.53
VPS13D-213ENST00000613099 GPRASP1Q5JY77 1395 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 BRD1O95696 1058 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 SYKP43405 635 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 PRR16Q569H4 304 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 EP400NLQ6ZTU2 488 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 SH3BP1Q9Y3L3 701 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 RGS12O14924 1447 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 CHMP2AO43633 222 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 AHCYL1O43865 530 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 ZFATQ9P243 1243 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 E7ENQ6 273 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 CCND1P24385 295 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 EMBQ6PCB8 327 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 IQUBQ8NA54 791 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 MSANTD4Q8NCY6 345 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 ATP2A3Q93084 1043 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 CCDC42Q96M95 316 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 NDUFA13Q9P0J0 144 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 TBCAO75347 108 aaKnown RBP5.5□□□□□ -1.53
VPS13D-213ENST00000613099 SERPINI2O75830 405 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 SAFB2Q14151 953 aaKnown RBP eCLIP5.5□□□□□ -1.53
VPS13D-213ENST00000613099 KARSQ15046 597 aaKnown RBP5.5□□□□□ -1.53
VPS13D-213ENST00000613099 PPANQ9NQ55 473 aaKnown RBP5.5□□□□□ -1.53
VPS13D-213ENST00000613099 ABCF2Q9UG63 623 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 CORO1CQ9ULV4 474 aaPredicted RBP5.5□□□□□ -1.53
VPS13D-213ENST00000613099 TNIP1Q15025 636 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 WASHC4Q2M389 1173 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 RUBCNQ92622 972 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 PFDN4Q9NQP4 134 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 DYTNA2CJ06 578 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 H0YC42 278 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 TPD52P55327 224 aaPredicted RBP5.5□□□□□ -1.53
VPS13D-213ENST00000613099 SAR1BQ9Y6B6 198 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 U3KPZ7 1027 aaPredicted RBP5.5□□□□□ -1.53
VPS13D-213ENST00000613099 SEC31AO94979 1220 aaKnown RBP5.5□□□□□ -1.53
VPS13D-213ENST00000613099 PHBP35232 272 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 CACTINQ8WUQ7 758 aaKnown RBP5.5□□□□□ -1.53
VPS13D-213ENST00000613099 HVCN1Q96D96 273 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 SAMM50Q9Y512 469 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 TACC3Q9Y6A5 838 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 UGGT2Q9NYU1 1516 aa5.5□□□□□ -1.53
VPS13D-213ENST00000613099 YEATS2Q9ULM3 1422 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 KIAA0825Q8IV33 1275 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 SIKE1Q9BRV8 207 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 R3HDM2Q9Y2K5 976 aaKnown RBP5.49□□□□□ -1.53
VPS13D-213ENST00000613099 NUP155O75694 1391 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 ACTN4O43707 911 aaKnown RBP5.49□□□□□ -1.53
VPS13D-213ENST00000613099 FAM200BP0CF97 657 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 HSPA9P38646 679 aaKnown RBP5.49□□□□□ -1.53
VPS13D-213ENST00000613099 KLC1Q07866 573 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 PSMD6Q15008 389 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 NOX5Q96PH1 765 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 TBC1D23Q9NUY8 699 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 KCNG1Q9UIX4 513 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 WWC3Q9ULE0 1092 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 AKR1B10O60218 316 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 PARP1P09874 1014 aaKnown RBP5.49□□□□□ -1.53
VPS13D-213ENST00000613099 KRT72Q14CN4 511 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.49□□□□□ -1.53
VPS13D-213ENST00000613099 KLHL33A6NCF5 533 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 RPS6KA5O75582 802 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 GSCP56915 257 aaPredicted RBP5.49□□□□□ -1.53
VPS13D-213ENST00000613099 ROR2Q01974 943 aaKnown RBP5.49□□□□□ -1.53
VPS13D-213ENST00000613099 BIRC3Q13489 604 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 CCDC122Q5T0U0 273 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 HIBCHQ6NVY1 386 aaPredicted RBP5.49□□□□□ -1.53
VPS13D-213ENST00000613099 SYCP3Q8IZU3 236 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 KCNK9Q9NPC2 374 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 RMND1Q9NWS8 449 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 SEPT10Q9P0V9 454 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 MAP3K5Q99683 1374 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 EPRSP07814 1512 aaKnown RBP5.49□□□□□ -1.53
VPS13D-213ENST00000613099 DNM1Q05193 864 aaKnown RBP5.49□□□□□ -1.53
VPS13D-213ENST00000613099 CWC27Q6UX04 472 aaKnown RBP5.49□□□□□ -1.53
VPS13D-213ENST00000613099 LRRC43Q8N309 656 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 ZCCHC17Q9NP64 241 aaKnown RBP5.49□□□□□ -1.53
VPS13D-213ENST00000613099 PPP2R2CQ9Y2T4 447 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 UTP11Q9Y3A2 253 aaKnown RBP5.49□□□□□ -1.53
VPS13D-213ENST00000613099 IPO5O00410 1097 aaKnown RBP5.49□□□□□ -1.53
VPS13D-213ENST00000613099 EPSTI1Q96J88 318 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 CAPZA3Q96KX2 299 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 ANKRD2Q9GZV1 360 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 A1CFQ9NQ94 594 aaKnown RBP5.49□□□□□ -1.53
VPS13D-213ENST00000613099 CNGB3Q9NQW8 809 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 SCHIP1Q9P0W5 487 aaPredicted RBP5.49□□□□□ -1.53
VPS13D-213ENST00000613099 MYL5Q02045 173 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 PIP4K2CQ8TBX8 421 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 CASP10Q92851 521 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 KRT5P13647 590 aa5.49□□□□□ -1.53
VPS13D-213ENST00000613099 UBLCP1Q8WVY7 318 aaPredicted RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms