RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 WDR33Q9C0J8 1336 aaKnown RBP17.07■□□□□ 0.32
CTSA-219ENST00000607841 GSG1L2A8MUP6 293 aa17.07■□□□□ 0.32
CTSA-219ENST00000607841 VEGFBP49765 207 aa17.07■□□□□ 0.32
CTSA-219ENST00000607841 GRM1Q13255 1194 aa17.07■□□□□ 0.32
CTSA-219ENST00000607841 BMP2KLQ5H9B9 411 aa17.07■□□□□ 0.32
CTSA-219ENST00000607841 CWC27Q6UX04 472 aaKnown RBP17.07■□□□□ 0.32
CTSA-219ENST00000607841 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.07■□□□□ 0.32
CTSA-219ENST00000607841 ARPP21Q9UBL0 812 aaPredicted RBP17.07■□□□□ 0.32
CTSA-219ENST00000607841 SERPINB13Q9UIV8 391 aa17.07■□□□□ 0.32
CTSA-219ENST00000607841 A0A0D9SFI3 127 aa17.06■□□□□ 0.32
CTSA-219ENST00000607841 SLC10A3P09131 477 aa17.06■□□□□ 0.32
CTSA-219ENST00000607841 TDO2P48775 406 aa17.06■□□□□ 0.32
CTSA-219ENST00000607841 NOGQ13253 232 aa17.06■□□□□ 0.32
CTSA-219ENST00000607841 VGLL4Q14135 290 aa17.06■□□□□ 0.32
CTSA-219ENST00000607841 SLC4A8Q2Y0W8 1093 aa17.06■□□□□ 0.32
CTSA-219ENST00000607841 SKAP1Q86WV1 359 aa17.06■□□□□ 0.32
CTSA-219ENST00000607841 RUFY2Q8WXA3 655 aa17.06■□□□□ 0.32
CTSA-219ENST00000607841 PHF20L1A8MW92 1017 aa17.05■□□□□ 0.32
CTSA-219ENST00000607841 USP17L12C9JPN9 530 aa17.05■□□□□ 0.32
CTSA-219ENST00000607841 USP17L21D6R901 530 aa17.05■□□□□ 0.32
CTSA-219ENST00000607841 CTNND1O60716 968 aaKnown RBP17.05■□□□□ 0.32
CTSA-219ENST00000607841 MAP2K2P36507 400 aa17.05■□□□□ 0.32
CTSA-219ENST00000607841 PLCD1P51178 756 aa17.05■□□□□ 0.32
CTSA-219ENST00000607841 SBK1Q52WX2 424 aa17.05■□□□□ 0.32
CTSA-219ENST00000607841 NOL9Q5SY16 702 aaKnown RBP17.05■□□□□ 0.32
CTSA-219ENST00000607841 CCDC129Q6ZRS4 1044 aa17.05■□□□□ 0.32
CTSA-219ENST00000607841 RASAL3Q86YV0 1011 aa17.05■□□□□ 0.32
CTSA-219ENST00000607841 IFNL3Q8IZI9 196 aa17.05■□□□□ 0.32
CTSA-219ENST00000607841 ZKSCAN4Q969J2 545 aaPredicted RBP17.05■□□□□ 0.32
CTSA-219ENST00000607841 CLMNQ96JQ2 1002 aa17.05■□□□□ 0.32
CTSA-219ENST00000607841 NAPBQ9H115 298 aa17.05■□□□□ 0.32
CTSA-219ENST00000607841 ELP3Q9H9T3 547 aa17.05■□□□□ 0.32
CTSA-219ENST00000607841 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.05■□□□□ 0.32
CTSA-219ENST00000607841 CCDC171Q6TFL3 1326 aa17.04■□□□□ 0.32
CTSA-219ENST00000607841 ZBTB48P10074 688 aaPredicted RBP17.04■□□□□ 0.32
CTSA-219ENST00000607841 INPP5BP32019 993 aa17.04■□□□□ 0.32
CTSA-219ENST00000607841 C12orf60Q5U649 245 aa17.04■□□□□ 0.32
CTSA-219ENST00000607841 CTR9Q6PD62 1173 aa17.04■□□□□ 0.32
CTSA-219ENST00000607841 REM2Q8IYK8 340 aaPredicted RBP17.04■□□□□ 0.32
CTSA-219ENST00000607841 SCYL3Q8IZE3 742 aa17.04■□□□□ 0.32
CTSA-219ENST00000607841 PICK1Q9NRD5 415 aa17.04■□□□□ 0.32
CTSA-219ENST00000607841 SWAP70Q9UH65 585 aa17.04■□□□□ 0.32
CTSA-219ENST00000607841 MYH7P12883 1935 aa17.04■□□□□ 0.32
CTSA-219ENST00000607841 RAD50Q92878 1312 aa17.03■□□□□ 0.32
CTSA-219ENST00000607841 FAM196BA6NMK8 535 aa17.03■□□□□ 0.32
CTSA-219ENST00000607841 FAM155AB1AL88 458 aaPredicted RBP17.03■□□□□ 0.32
CTSA-219ENST00000607841 CHMLP26374 656 aa17.03■□□□□ 0.32
CTSA-219ENST00000607841 SPRYD7Q5W111 196 aa17.03■□□□□ 0.32
CTSA-219ENST00000607841 ERO1BQ86YB8 467 aa17.03■□□□□ 0.32
CTSA-219ENST00000607841 OPTNQ96CV9 577 aa17.03■□□□□ 0.32
CTSA-219ENST00000607841 GINM1Q9NU53 330 aa17.03■□□□□ 0.32
CTSA-219ENST00000607841 SNCAIPQ9Y6H5 919 aa17.03■□□□□ 0.32
CTSA-219ENST00000607841 SPDYE5A6NIY4 337 aa17.02■□□□□ 0.32
CTSA-219ENST00000607841 MINDY4BA8MYZ0 360 aa17.02■□□□□ 0.32
CTSA-219ENST00000607841 SLURP2P0DP57 97 aa17.02■□□□□ 0.32
CTSA-219ENST00000607841 CYP2D6P10635 497 aa17.02■□□□□ 0.32
CTSA-219ENST00000607841 CAP2P40123 477 aa17.02■□□□□ 0.32
CTSA-219ENST00000607841 PPATQ06203 517 aa17.02■□□□□ 0.32
CTSA-219ENST00000607841 GABPAQ06546 454 aa17.02■□□□□ 0.32
CTSA-219ENST00000607841 TATDN1Q6P1N9 297 aa17.02■□□□□ 0.32
CTSA-219ENST00000607841 ZNF589Q86UQ0 364 aaPredicted RBP17.02■□□□□ 0.32
CTSA-219ENST00000607841 WNK4Q96J92 1243 aa17.02■□□□□ 0.32
CTSA-219ENST00000607841 DNAJC18Q9H819 358 aa17.02■□□□□ 0.32
CTSA-219ENST00000607841 ZNF287Q9HBT7 754 aa17.02■□□□□ 0.32
CTSA-219ENST00000607841 EPB41L4AQ9HCS5 686 aaPredicted RBP17.02■□□□□ 0.32
CTSA-219ENST00000607841 SLC3A2P08195 630 aaKnown RBP17.01■□□□□ 0.31
CTSA-219ENST00000607841 HSPD1P10809 573 aaKnown RBP17.01■□□□□ 0.31
CTSA-219ENST00000607841 ALX1Q15699 326 aa17.01■□□□□ 0.31
CTSA-219ENST00000607841 CERKLQ49MI3 558 aaPredicted RBP17.01■□□□□ 0.31
CTSA-219ENST00000607841 VPS53Q5VIR6 699 aa17.01■□□□□ 0.31
CTSA-219ENST00000607841 CASC1Q6TDU7 716 aa17.01■□□□□ 0.31
CTSA-219ENST00000607841 MANSC4A6NHS7 340 aaPredicted RBP17■□□□□ 0.31
CTSA-219ENST00000607841 AOC2O75106 756 aa17■□□□□ 0.31
CTSA-219ENST00000607841 ASNSP08243 561 aa17■□□□□ 0.31
CTSA-219ENST00000607841 INHBEP58166 350 aa17■□□□□ 0.31
CTSA-219ENST00000607841 KIF23Q02241 960 aaPredicted RBP17■□□□□ 0.31
CTSA-219ENST00000607841 MAP2K1Q02750 393 aaPredicted RBP17■□□□□ 0.31
CTSA-219ENST00000607841 JMYQ8N9B5 988 aa17■□□□□ 0.31
CTSA-219ENST00000607841 OTUD5Q96G74 571 aa17■□□□□ 0.31
CTSA-219ENST00000607841 TBC1D2Q9BYX2 928 aa17■□□□□ 0.31
CTSA-219ENST00000607841 CABP5Q9NP86 173 aa17■□□□□ 0.31
CTSA-219ENST00000607841 FOCADQ5VW36 1801 aa17■□□□□ 0.31
CTSA-219ENST00000607841 AK9Q5TCS8 1911 aa17■□□□□ 0.31
CTSA-219ENST00000607841 CYP2D7A0A087X1C5 515 aa16.99■□□□□ 0.31
CTSA-219ENST00000607841 PTPRAP18433 802 aa16.99■□□□□ 0.31
CTSA-219ENST00000607841 SHMT1P34896 483 aa16.99■□□□□ 0.31
CTSA-219ENST00000607841 SREBF2Q12772 1141 aa16.99■□□□□ 0.31
CTSA-219ENST00000607841 MKRN3Q13064 507 aaKnown RBP16.99■□□□□ 0.31
CTSA-219ENST00000607841 PPIL2Q13356 520 aa16.99■□□□□ 0.31
CTSA-219ENST00000607841 C16orf86Q6ZW13 317 aa16.99■□□□□ 0.31
CTSA-219ENST00000607841 DYNLL2Q96FJ2 89 aa16.99■□□□□ 0.31
CTSA-219ENST00000607841 DSCC1Q9BVC3 393 aa16.99■□□□□ 0.31
CTSA-219ENST00000607841 MKNK2Q9HBH9 465 aa16.99■□□□□ 0.31
CTSA-219ENST00000607841 ZHX2Q9Y6X8 837 aa16.99■□□□□ 0.31
CTSA-219ENST00000607841 ZMYM6O95789 1325 aa16.98■□□□□ 0.31
CTSA-219ENST00000607841 FOXP2O15409 715 aa16.98■□□□□ 0.31
CTSA-219ENST00000607841 FGAP02671 866 aa16.98■□□□□ 0.31
CTSA-219ENST00000607841 CDK8P49336 464 aa16.98■□□□□ 0.31
CTSA-219ENST00000607841 GTF2A2P52657 109 aa16.98■□□□□ 0.31
CTSA-219ENST00000607841 PDE4BQ07343 736 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms