RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 FAM161BQ96MY7 647 aa14.69□□□□□ -0.06
PDLIM1P1-201ENST00000604187 SEMA3EO15041 775 aa14.68□□□□□ -0.06
PDLIM1P1-201ENST00000604187 COL6A1P12109 1028 aa14.68□□□□□ -0.06
PDLIM1P1-201ENST00000604187 CYP2B6P20813 491 aa14.68□□□□□ -0.06
PDLIM1P1-201ENST00000604187 BTDP43251 543 aa14.68□□□□□ -0.06
PDLIM1P1-201ENST00000604187 PHKA1P46020 1223 aa14.68□□□□□ -0.06
PDLIM1P1-201ENST00000604187 PABPC4Q13310 644 aaKnown RBP eCLIP14.68□□□□□ -0.06
PDLIM1P1-201ENST00000604187 MAP3K21Q5TCX8 1036 aa14.68□□□□□ -0.06
PDLIM1P1-201ENST00000604187 ATG9AQ7Z3C6 839 aa14.68□□□□□ -0.06
PDLIM1P1-201ENST00000604187 ZNF280CQ8ND82 737 aa14.68□□□□□ -0.06
PDLIM1P1-201ENST00000604187 ASCC2Q9H1I8 757 aaPredicted RBP14.68□□□□□ -0.06
PDLIM1P1-201ENST00000604187 DENND2AQ9ULE3 1009 aa14.68□□□□□ -0.06
PDLIM1P1-201ENST00000604187 LAMA2P24043 3122 aaKnown RBP14.67□□□□□ -0.06
PDLIM1P1-201ENST00000604187 LRRC26Q2I0M4 334 aa14.67□□□□□ -0.06
PDLIM1P1-201ENST00000604187 SIL1Q9H173 461 aa14.67□□□□□ -0.06
PDLIM1P1-201ENST00000604187 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.67□□□□□ -0.06
PDLIM1P1-201ENST00000604187 MORF4L1Q9UBU8 362 aa14.67□□□□□ -0.06
PDLIM1P1-201ENST00000604187 POTEB2H3BUK9 544 aa14.66□□□□□ -0.06
PDLIM1P1-201ENST00000604187 ZKSCAN1P17029 563 aaPredicted RBP14.66□□□□□ -0.06
PDLIM1P1-201ENST00000604187 FAM109BQ6ICB4 259 aaPredicted RBP14.66□□□□□ -0.06
PDLIM1P1-201ENST00000604187 ZGPATQ8N5A5 531 aaKnown RBP14.66□□□□□ -0.06
PDLIM1P1-201ENST00000604187 SOCS4Q8WXH5 440 aa14.66□□□□□ -0.06
PDLIM1P1-201ENST00000604187 USP44Q9H0E7 712 aa14.66□□□□□ -0.06
PDLIM1P1-201ENST00000604187 ABCF2Q9UG63 623 aa14.66□□□□□ -0.06
PDLIM1P1-201ENST00000604187 TBC1D12O60347 775 aa14.65□□□□□ -0.06
PDLIM1P1-201ENST00000604187 PEX10O60683 326 aa14.65□□□□□ -0.06
PDLIM1P1-201ENST00000604187 ADORA1P30542 326 aa14.65□□□□□ -0.06
PDLIM1P1-201ENST00000604187 IRX3P78415 501 aaPredicted RBP14.65□□□□□ -0.06
PDLIM1P1-201ENST00000604187 RASGRF1Q13972 1273 aa14.65□□□□□ -0.06
PDLIM1P1-201ENST00000604187 SLF2Q8IX21 1173 aa14.65□□□□□ -0.06
PDLIM1P1-201ENST00000604187 OSBPL5Q9H0X9 879 aaPredicted RBP14.65□□□□□ -0.06
PDLIM1P1-201ENST00000604187 CEP126Q9P2H0 1117 aa14.65□□□□□ -0.06
PDLIM1P1-201ENST00000604187 MROH7-TTC4A0A0A0MT08 1334 aa14.65□□□□□ -0.06
PDLIM1P1-201ENST00000604187 ALPK3Q96L96 1907 aa14.64□□□□□ -0.07
PDLIM1P1-201ENST00000604187 CIAO1O76071 339 aa14.64□□□□□ -0.07
PDLIM1P1-201ENST00000604187 ATXN8OSP0DMR3 200 aa14.64□□□□□ -0.07
PDLIM1P1-201ENST00000604187 XRCC5P13010 732 aaKnown RBP14.64□□□□□ -0.07
PDLIM1P1-201ENST00000604187 CCND3P30281 292 aaPredicted RBP14.64□□□□□ -0.07
PDLIM1P1-201ENST00000604187 CACNB2Q08289 660 aaPredicted RBP14.64□□□□□ -0.07
PDLIM1P1-201ENST00000604187 PDE3AQ14432 1141 aa14.64□□□□□ -0.07
PDLIM1P1-201ENST00000604187 CCDC102BQ68D86 513 aa14.64□□□□□ -0.07
PDLIM1P1-201ENST00000604187 FAM163AQ96GL9 167 aaPredicted RBP14.64□□□□□ -0.07
PDLIM1P1-201ENST00000604187 LBHD1Q9BQE6 289 aaPredicted RBP14.64□□□□□ -0.07
PDLIM1P1-201ENST00000604187 NUDT12Q9BQG2 462 aa14.64□□□□□ -0.07
PDLIM1P1-201ENST00000604187 DDX60LQ5H9U9 1706 aaKnown RBP14.63□□□□□ -0.07
PDLIM1P1-201ENST00000604187 USP17L5A8MUK1 530 aa14.63□□□□□ -0.07
PDLIM1P1-201ENST00000604187 RHBDL3P58872 404 aa14.63□□□□□ -0.07
PDLIM1P1-201ENST00000604187 MTMR2Q13614 643 aa14.63□□□□□ -0.07
PDLIM1P1-201ENST00000604187 RRP1BQ14684 758 aaKnown RBP14.63□□□□□ -0.07
PDLIM1P1-201ENST00000604187 SH3D19Q5HYK7 790 aa14.63□□□□□ -0.07
PDLIM1P1-201ENST00000604187 ZNF697Q5TEC3 545 aa14.63□□□□□ -0.07
PDLIM1P1-201ENST00000604187 LHX8Q68G74 356 aa14.63□□□□□ -0.07
PDLIM1P1-201ENST00000604187 MRPL50Q8N5N7 158 aaKnown RBP14.63□□□□□ -0.07
PDLIM1P1-201ENST00000604187 GPRC5AQ8NFJ5 357 aa14.63□□□□□ -0.07
PDLIM1P1-201ENST00000604187 TBC1D2Q9BYX2 928 aa14.63□□□□□ -0.07
PDLIM1P1-201ENST00000604187 MRS2Q9HD23 443 aa14.63□□□□□ -0.07
PDLIM1P1-201ENST00000604187 TXNRD2Q9NNW7 524 aa14.63□□□□□ -0.07
PDLIM1P1-201ENST00000604187 MGAMO43451 1857 aa14.63□□□□□ -0.07
PDLIM1P1-201ENST00000604187 COL2A1P02458 1487 aaPredicted RBP14.63□□□□□ -0.07
PDLIM1P1-201ENST00000604187 GPR75-ASB3A0A0A6YYF3 556 aa14.62□□□□□ -0.07
PDLIM1P1-201ENST00000604187 CAP2P40123 477 aa14.62□□□□□ -0.07
PDLIM1P1-201ENST00000604187 MECOMQ03112 1051 aa14.62□□□□□ -0.07
PDLIM1P1-201ENST00000604187 CCL14Q16627 93 aa14.62□□□□□ -0.07
PDLIM1P1-201ENST00000604187 SPTY2D1Q68D10 685 aaPredicted RBP14.62□□□□□ -0.07
PDLIM1P1-201ENST00000604187 TRMT44Q8IYL2 757 aaKnown RBP14.62□□□□□ -0.07
PDLIM1P1-201ENST00000604187 P2RX7Q99572 595 aaKnown RBP14.62□□□□□ -0.07
PDLIM1P1-201ENST00000604187 AS3MTQ9HBK9 375 aa14.62□□□□□ -0.07
PDLIM1P1-201ENST00000604187 PTPRCP08575 1304 aa14.62□□□□□ -0.07
PDLIM1P1-201ENST00000604187 MAPK4P31152 587 aa14.61□□□□□ -0.07
PDLIM1P1-201ENST00000604187 RGS2P41220 211 aa14.61□□□□□ -0.07
PDLIM1P1-201ENST00000604187 HERVK_113P62684 666 aa14.61□□□□□ -0.07
PDLIM1P1-201ENST00000604187 MAFAQ8NHW3 353 aaPredicted RBP14.61□□□□□ -0.07
PDLIM1P1-201ENST00000604187 ZNF384Q8TF68 577 aa14.61□□□□□ -0.07
PDLIM1P1-201ENST00000604187 CDX2Q99626 313 aaPredicted RBP14.61□□□□□ -0.07
PDLIM1P1-201ENST00000604187 PRDM6Q9NQX0 595 aa14.61□□□□□ -0.07
PDLIM1P1-201ENST00000604187 TMOD4Q9NZQ9 345 aa14.61□□□□□ -0.07
PDLIM1P1-201ENST00000604187 FBXO3Q9UK99 471 aa14.61□□□□□ -0.07
PDLIM1P1-201ENST00000604187 DOCK2Q92608 1830 aa14.61□□□□□ -0.07
PDLIM1P1-201ENST00000604187 PDS5AQ29RF7 1337 aaKnown RBP14.61□□□□□ -0.07
PDLIM1P1-201ENST00000604187 EYSQ5T1H1 3165 aa14.61□□□□□ -0.07
PDLIM1P1-201ENST00000604187 IL15P40933 162 aaPredicted RBP14.6□□□□□ -0.07
PDLIM1P1-201ENST00000604187 CCAR1Q8IX12 1150 aaKnown RBP14.6□□□□□ -0.07
PDLIM1P1-201ENST00000604187 USP6NLQ92738 828 aa14.6□□□□□ -0.07
PDLIM1P1-201ENST00000604187 APBA2Q99767 749 aa14.6□□□□□ -0.07
PDLIM1P1-201ENST00000604187 SENP6Q9GZR1 1112 aaPredicted RBP14.6□□□□□ -0.07
PDLIM1P1-201ENST00000604187 PORCNQ9H237 461 aa14.6□□□□□ -0.07
PDLIM1P1-201ENST00000604187 RBPJLQ9UBG7 517 aa14.6□□□□□ -0.07
PDLIM1P1-201ENST00000604187 DOCK1Q14185 1865 aa14.6□□□□□ -0.07
PDLIM1P1-201ENST00000604187 HOXA7P31268 230 aaPredicted RBP14.59□□□□□ -0.07
PDLIM1P1-201ENST00000604187 ATN1P54259 1190 aaPredicted RBP14.59□□□□□ -0.07
PDLIM1P1-201ENST00000604187 BACE1P56817 501 aa14.59□□□□□ -0.07
PDLIM1P1-201ENST00000604187 ERICH6Q7L0X2 663 aa14.59□□□□□ -0.07
PDLIM1P1-201ENST00000604187 GPR142Q7Z601 462 aa14.59□□□□□ -0.07
PDLIM1P1-201ENST00000604187 PAGR1Q9BTK6 254 aa14.59□□□□□ -0.07
PDLIM1P1-201ENST00000604187 WDR18Q9BV38 432 aa14.59□□□□□ -0.07
PDLIM1P1-201ENST00000604187 PA2G4Q9UQ80 394 aaKnown RBP14.59□□□□□ -0.07
PDLIM1P1-201ENST00000604187 UBTFL1P0CB47 393 aaPredicted RBP14.58□□□□□ -0.08
PDLIM1P1-201ENST00000604187 ERVK-9P63128 1117 aa14.58□□□□□ -0.08
PDLIM1P1-201ENST00000604187 ERVK-24P63145 666 aa14.58□□□□□ -0.08
PDLIM1P1-201ENST00000604187 MORN1Q5T089 497 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms