RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 TDO2P48775 406 aa19.78■□□□□ 0.76
SHKBP1-219ENST00000599575 MAP3K9P80192 1104 aa19.78■□□□□ 0.76
SHKBP1-219ENST00000599575 SKAP1Q86WV1 359 aa19.78■□□□□ 0.76
SHKBP1-219ENST00000599575 CCDC102AQ96A19 550 aa19.78■□□□□ 0.76
SHKBP1-219ENST00000599575 DSCC1Q9BVC3 393 aa19.78■□□□□ 0.76
SHKBP1-219ENST00000599575 NAPBQ9H115 298 aa19.78■□□□□ 0.76
SHKBP1-219ENST00000599575 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.78■□□□□ 0.76
SHKBP1-219ENST00000599575 ZNF287Q9HBT7 754 aa19.78■□□□□ 0.76
SHKBP1-219ENST00000599575 SAP30BPQ9UHR5 308 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-219ENST00000599575 GTF3C3Q9Y5Q9 886 aa19.78■□□□□ 0.76
SHKBP1-219ENST00000599575 CSADQ9Y600 493 aa19.78■□□□□ 0.76
SHKBP1-219ENST00000599575 SGSM2O43147 1006 aa19.77■□□□□ 0.76
SHKBP1-219ENST00000599575 CTNND1O60716 968 aaKnown RBP19.77■□□□□ 0.76
SHKBP1-219ENST00000599575 HSPD1P10809 573 aaKnown RBP19.77■□□□□ 0.76
SHKBP1-219ENST00000599575 DEFB115Q30KQ5 88 aa19.77■□□□□ 0.76
SHKBP1-219ENST00000599575 CTR9Q6PD62 1173 aa19.77■□□□□ 0.76
SHKBP1-219ENST00000599575 MIGA2Q7L4E1 593 aa19.77■□□□□ 0.76
SHKBP1-219ENST00000599575 ZNF589Q86UQ0 364 aaPredicted RBP19.77■□□□□ 0.76
SHKBP1-219ENST00000599575 WRNIP1Q96S55 665 aa19.77■□□□□ 0.76
SHKBP1-219ENST00000599575 PHF20L1A8MW92 1017 aa19.76■□□□□ 0.75
SHKBP1-219ENST00000599575 SLC3A2P08195 630 aaKnown RBP19.76■□□□□ 0.75
SHKBP1-219ENST00000599575 ECE1P42892 770 aa19.76■□□□□ 0.75
SHKBP1-219ENST00000599575 NT5C2P49902 561 aa19.76■□□□□ 0.75
SHKBP1-219ENST00000599575 GABPAQ06546 454 aa19.76■□□□□ 0.75
SHKBP1-219ENST00000599575 NOL9Q5SY16 702 aaKnown RBP19.76■□□□□ 0.75
SHKBP1-219ENST00000599575 RGMBQ6NW40 437 aa19.76■□□□□ 0.75
SHKBP1-219ENST00000599575 TATDN1Q6P1N9 297 aa19.76■□□□□ 0.75
SHKBP1-219ENST00000599575 CCDC129Q6ZRS4 1044 aa19.76■□□□□ 0.75
SHKBP1-219ENST00000599575 CTNNA3Q9UI47 895 aa19.76■□□□□ 0.75
SHKBP1-219ENST00000599575 AK9Q5TCS8 1911 aa19.75■□□□□ 0.75
SHKBP1-219ENST00000599575 UBE2Q2LH0YL09 131 aa19.75■□□□□ 0.75
SHKBP1-219ENST00000599575 EIF5BO60841 1220 aaKnown RBP19.75■□□□□ 0.75
SHKBP1-219ENST00000599575 PLCD1P51178 756 aa19.75■□□□□ 0.75
SHKBP1-219ENST00000599575 PRKG1Q13976 671 aa19.75■□□□□ 0.75
SHKBP1-219ENST00000599575 EPB41L4AQ9HCS5 686 aaPredicted RBP19.75■□□□□ 0.75
SHKBP1-219ENST00000599575 ROBO3Q96MS0 1386 aa19.74■□□□□ 0.75
SHKBP1-219ENST00000599575 FOXP2O15409 715 aa19.74■□□□□ 0.75
SHKBP1-219ENST00000599575 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.74■□□□□ 0.75
SHKBP1-219ENST00000599575 SLC10A4Q96EP9 437 aa19.74■□□□□ 0.75
SHKBP1-219ENST00000599575 TBC1D2Q9BYX2 928 aa19.74■□□□□ 0.75
SHKBP1-219ENST00000599575 ANAPC4Q9UJX5 808 aa19.74■□□□□ 0.75
SHKBP1-219ENST00000599575 DDX60LQ5H9U9 1706 aaKnown RBP19.73■□□□□ 0.75
SHKBP1-219ENST00000599575 CDK5RAP2Q96SN8 1893 aa19.73■□□□□ 0.75
SHKBP1-219ENST00000599575 FGAP02671 866 aa19.73■□□□□ 0.75
SHKBP1-219ENST00000599575 PCP11498 1178 aaKnown RBP19.73■□□□□ 0.75
SHKBP1-219ENST00000599575 ZNF157P51786 506 aaPredicted RBP19.73■□□□□ 0.75
SHKBP1-219ENST00000599575 VPS53Q5VIR6 699 aa19.73■□□□□ 0.75
SHKBP1-219ENST00000599575 KIAA1211Q6ZU35 1233 aa19.73■□□□□ 0.75
SHKBP1-219ENST00000599575 C16orf86Q6ZW13 317 aa19.73■□□□□ 0.75
SHKBP1-219ENST00000599575 SCYL3Q8IZE3 742 aa19.73■□□□□ 0.75
SHKBP1-219ENST00000599575 CCDC17Q96LX7 622 aa19.73■□□□□ 0.75
SHKBP1-219ENST00000599575 ESYT1Q9BSJ8 1104 aa19.73■□□□□ 0.75
SHKBP1-219ENST00000599575 ASNSP08243 561 aa19.72■□□□□ 0.75
SHKBP1-219ENST00000599575 ZBTB48P10074 688 aaPredicted RBP19.72■□□□□ 0.75
SHKBP1-219ENST00000599575 CAP2P40123 477 aa19.72■□□□□ 0.75
SHKBP1-219ENST00000599575 VGLL4Q14135 290 aa19.72■□□□□ 0.75
SHKBP1-219ENST00000599575 MOB2Q70IA6 237 aa19.72■□□□□ 0.75
SHKBP1-219ENST00000599575 ERO1BQ86YB8 467 aa19.72■□□□□ 0.75
SHKBP1-219ENST00000599575 REM2Q8IYK8 340 aaPredicted RBP19.72■□□□□ 0.75
SHKBP1-219ENST00000599575 DNAJC18Q9H819 358 aa19.72■□□□□ 0.75
SHKBP1-219ENST00000599575 PICK1Q9NRD5 415 aa19.72■□□□□ 0.75
SHKBP1-219ENST00000599575 NAV1Q8NEY1 1877 aa19.71■□□□□ 0.75
SHKBP1-219ENST00000599575 MINDY4BA8MYZ0 360 aa19.71■□□□□ 0.75
SHKBP1-219ENST00000599575 PPATQ06203 517 aa19.71■□□□□ 0.75
SHKBP1-219ENST00000599575 PDE4BQ07343 736 aa19.71■□□□□ 0.75
SHKBP1-219ENST00000599575 PPARAQ07869 468 aa19.71■□□□□ 0.75
SHKBP1-219ENST00000599575 NOGQ13253 232 aa19.71■□□□□ 0.75
SHKBP1-219ENST00000599575 SPDYE5A6NIY4 337 aa19.7■□□□□ 0.74
SHKBP1-219ENST00000599575 EPB41L2O43491 1005 aaKnown RBP19.7■□□□□ 0.74
SHKBP1-219ENST00000599575 SLC10A3P09131 477 aa19.7■□□□□ 0.74
SHKBP1-219ENST00000599575 INPP5BP32019 993 aa19.7■□□□□ 0.74
SHKBP1-219ENST00000599575 CERKLQ49MI3 558 aaPredicted RBP19.7■□□□□ 0.74
SHKBP1-219ENST00000599575 ZKSCAN4Q969J2 545 aaPredicted RBP19.7■□□□□ 0.74
SHKBP1-219ENST00000599575 SNCAIPQ9Y6H5 919 aa19.7■□□□□ 0.74
SHKBP1-219ENST00000599575 U3KPZ7 1027 aaPredicted RBP19.7■□□□□ 0.74
SHKBP1-219ENST00000599575 MYH1P12882 1939 aa19.69■□□□□ 0.74
SHKBP1-219ENST00000599575 CYP2D6P10635 497 aa19.69■□□□□ 0.74
SHKBP1-219ENST00000599575 SHMT1P34896 483 aa19.69■□□□□ 0.74
SHKBP1-219ENST00000599575 MAP2K2P36507 400 aa19.69■□□□□ 0.74
SHKBP1-219ENST00000599575 CDK8P49336 464 aa19.69■□□□□ 0.74
SHKBP1-219ENST00000599575 IMMTQ16891 758 aaKnown RBP19.69■□□□□ 0.74
SHKBP1-219ENST00000599575 MAP4K1Q92918 833 aa19.69■□□□□ 0.74
SHKBP1-219ENST00000599575 CAPNS2Q96L46 248 aa19.69■□□□□ 0.74
SHKBP1-219ENST00000599575 RNF41Q9H4P4 317 aaPredicted RBP19.69■□□□□ 0.74
SHKBP1-219ENST00000599575 CABP5Q9NP86 173 aa19.69■□□□□ 0.74
SHKBP1-219ENST00000599575 FZD1Q9UP38 647 aa19.69■□□□□ 0.74
SHKBP1-219ENST00000599575 ZNF213O14771 459 aa19.68■□□□□ 0.74
SHKBP1-219ENST00000599575 FGRP09769 529 aa19.68■□□□□ 0.74
SHKBP1-219ENST00000599575 INHBEP58166 350 aa19.68■□□□□ 0.74
SHKBP1-219ENST00000599575 RASAL3Q86YV0 1011 aa19.68■□□□□ 0.74
SHKBP1-219ENST00000599575 CLMNQ96JQ2 1002 aa19.68■□□□□ 0.74
SHKBP1-219ENST00000599575 IL25Q9H293 177 aa19.68■□□□□ 0.74
SHKBP1-219ENST00000599575 MKNK2Q9HBH9 465 aa19.68■□□□□ 0.74
SHKBP1-219ENST00000599575 CYP2D7A0A087X1C5 515 aa19.67■□□□□ 0.74
SHKBP1-219ENST00000599575 FAM196BA6NMK8 535 aa19.67■□□□□ 0.74
SHKBP1-219ENST00000599575 REC8O95072 547 aa19.67■□□□□ 0.74
SHKBP1-219ENST00000599575 PTPRAP18433 802 aa19.67■□□□□ 0.74
SHKBP1-219ENST00000599575 PPIL2Q13356 520 aa19.67■□□□□ 0.74
SHKBP1-219ENST00000599575 ABCB5Q2M3G0 1257 aa19.67■□□□□ 0.74
SHKBP1-219ENST00000599575 SLC4A8Q2Y0W8 1093 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms