RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 MDM2Q00987 491 aaPredicted RBP15.97■□□□□ 0.15
PRKCSH-210ENST00000589990 SPP2Q13103 211 aa15.97■□□□□ 0.15
PRKCSH-210ENST00000589990 FAM161BQ96MY7 647 aa15.97■□□□□ 0.15
PRKCSH-210ENST00000589990 CDH23Q9H251 3354 aa15.96■□□□□ 0.15
PRKCSH-210ENST00000589990 PRKAR2AP13861 404 aaKnown RBP15.96■□□□□ 0.15
PRKCSH-210ENST00000589990 CYP2B6P20813 491 aa15.96■□□□□ 0.15
PRKCSH-210ENST00000589990 ATP2B3Q16720 1220 aa15.96■□□□□ 0.15
PRKCSH-210ENST00000589990 LRRC26Q2I0M4 334 aa15.96■□□□□ 0.15
PRKCSH-210ENST00000589990 MRPL50Q8N5N7 158 aaKnown RBP15.96■□□□□ 0.15
PRKCSH-210ENST00000589990 ZNF384Q8TF68 577 aa15.96■□□□□ 0.15
PRKCSH-210ENST00000589990 ASCC2Q9H1I8 757 aaPredicted RBP15.96■□□□□ 0.15
PRKCSH-210ENST00000589990 COL6A1P12109 1028 aa15.95■□□□□ 0.14
PRKCSH-210ENST00000589990 BTDP43251 543 aa15.95■□□□□ 0.14
PRKCSH-210ENST00000589990 MAP3K21Q5TCX8 1036 aa15.95■□□□□ 0.14
PRKCSH-210ENST00000589990 PNMA3Q9UL41 463 aa15.95■□□□□ 0.14
PRKCSH-210ENST00000589990 RHBDL3P58872 404 aa15.94■□□□□ 0.14
PRKCSH-210ENST00000589990 PROCA1Q8NCQ7 364 aaPredicted RBP15.94■□□□□ 0.14
PRKCSH-210ENST00000589990 TXNRD2Q9NNW7 524 aa15.94■□□□□ 0.14
PRKCSH-210ENST00000589990 DENND2AQ9ULE3 1009 aa15.94■□□□□ 0.14
PRKCSH-210ENST00000589990 COL2A1P02458 1487 aaPredicted RBP15.94■□□□□ 0.14
PRKCSH-210ENST00000589990 POTEB2H3BUK9 544 aa15.93■□□□□ 0.14
PRKCSH-210ENST00000589990 CCND3P30281 292 aaPredicted RBP15.93■□□□□ 0.14
PRKCSH-210ENST00000589990 GCLCP48506 637 aaPredicted RBP15.93■□□□□ 0.14
PRKCSH-210ENST00000589990 RASGRF1Q13972 1273 aa15.93■□□□□ 0.14
PRKCSH-210ENST00000589990 CCL14Q16627 93 aa15.93■□□□□ 0.14
PRKCSH-210ENST00000589990 SHROOM1Q2M3G4 852 aaPredicted RBP15.93■□□□□ 0.14
PRKCSH-210ENST00000589990 CCDC102BQ68D86 513 aa15.93■□□□□ 0.14
PRKCSH-210ENST00000589990 DZIP1Q86YF9 867 aaKnown RBP15.93■□□□□ 0.14
PRKCSH-210ENST00000589990 ZNF280CQ8ND82 737 aa15.93■□□□□ 0.14
PRKCSH-210ENST00000589990 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.93■□□□□ 0.14
PRKCSH-210ENST00000589990 MRS2Q9HD23 443 aa15.93■□□□□ 0.14
PRKCSH-210ENST00000589990 ABCF2Q9UG63 623 aa15.93■□□□□ 0.14
PRKCSH-210ENST00000589990 PA2G4Q9UQ80 394 aaKnown RBP15.93■□□□□ 0.14
PRKCSH-210ENST00000589990 SIPA1L1O43166 1804 aa15.92■□□□□ 0.14
PRKCSH-210ENST00000589990 JAG1P78504 1218 aa15.92■□□□□ 0.14
PRKCSH-210ENST00000589990 CACNB2Q08289 660 aaPredicted RBP15.92■□□□□ 0.14
PRKCSH-210ENST00000589990 LHX8Q68G74 356 aa15.92■□□□□ 0.14
PRKCSH-210ENST00000589990 POTEEQ6S8J3 1075 aa15.92■□□□□ 0.14
PRKCSH-210ENST00000589990 GNL3LQ9NVN8 582 aaKnown RBP15.92■□□□□ 0.14
PRKCSH-210ENST00000589990 MORF4L1Q9UBU8 362 aa15.92■□□□□ 0.14
PRKCSH-210ENST00000589990 MROH7-TTC4A0A0A0MT08 1334 aa15.92■□□□□ 0.14
PRKCSH-210ENST00000589990 FRMPD3Q5JV73 1810 aa15.91■□□□□ 0.14
PRKCSH-210ENST00000589990 TTC28Q96AY4 2481 aa15.91■□□□□ 0.14
PRKCSH-210ENST00000589990 TBC1D12O60347 775 aa15.91■□□□□ 0.14
PRKCSH-210ENST00000589990 MECOMQ03112 1051 aa15.91■□□□□ 0.14
PRKCSH-210ENST00000589990 P2RX7Q99572 595 aaKnown RBP15.91■□□□□ 0.14
PRKCSH-210ENST00000589990 CEP126Q9P2H0 1117 aa15.91■□□□□ 0.14
PRKCSH-210ENST00000589990 MAST2Q6P0Q8 1798 aa15.9■□□□□ 0.14
PRKCSH-210ENST00000589990 GPR75-ASB3A0A0A6YYF3 556 aa15.9■□□□□ 0.14
PRKCSH-210ENST00000589990 SEMA3EO15041 775 aa15.9■□□□□ 0.14
PRKCSH-210ENST00000589990 CAP2P40123 477 aa15.9■□□□□ 0.14
PRKCSH-210ENST00000589990 TIMM10P62072 90 aa15.9■□□□□ 0.14
PRKCSH-210ENST00000589990 Q3C1V9 767 aa15.9■□□□□ 0.14
PRKCSH-210ENST00000589990 FAM163AQ96GL9 167 aaPredicted RBP15.9■□□□□ 0.14
PRKCSH-210ENST00000589990 OSBPL5Q9H0X9 879 aaPredicted RBP15.9■□□□□ 0.14
PRKCSH-210ENST00000589990 PORCNQ9H237 461 aa15.9■□□□□ 0.14
PRKCSH-210ENST00000589990 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.9■□□□□ 0.14
PRKCSH-210ENST00000589990 CIAO1O76071 339 aa15.89■□□□□ 0.13
PRKCSH-210ENST00000589990 MTMR2Q13614 643 aa15.89■□□□□ 0.13
PRKCSH-210ENST00000589990 SH3D19Q5HYK7 790 aa15.89■□□□□ 0.13
PRKCSH-210ENST00000589990 PI16Q6UXB8 463 aa15.89■□□□□ 0.13
PRKCSH-210ENST00000589990 SSH1Q8WYL5 1049 aa15.89■□□□□ 0.13
PRKCSH-210ENST00000589990 USP6NLQ92738 828 aa15.89■□□□□ 0.13
PRKCSH-210ENST00000589990 USP17L5A8MUK1 530 aa15.88■□□□□ 0.13
PRKCSH-210ENST00000589990 ZKSCAN1P17029 563 aaPredicted RBP15.88■□□□□ 0.13
PRKCSH-210ENST00000589990 FAM109BQ6ICB4 259 aaPredicted RBP15.88■□□□□ 0.13
PRKCSH-210ENST00000589990 TBC1D9Q6ZT07 1266 aa15.88■□□□□ 0.13
PRKCSH-210ENST00000589990 NUDT12Q9BQG2 462 aa15.88■□□□□ 0.13
PRKCSH-210ENST00000589990 RBPJLQ9UBG7 517 aa15.88■□□□□ 0.13
PRKCSH-210ENST00000589990 LTBP2Q14767 1821 aa15.88■□□□□ 0.13
PRKCSH-210ENST00000589990 MUC3AQ02505 3323 aa15.88■□□□□ 0.13
PRKCSH-210ENST00000589990 PTPRCP08575 1304 aa15.88■□□□□ 0.13
PRKCSH-210ENST00000589990 HERVK_113P62684 666 aa15.87■□□□□ 0.13
PRKCSH-210ENST00000589990 IRX3P78415 501 aaPredicted RBP15.87■□□□□ 0.13
PRKCSH-210ENST00000589990 PABPC4Q13310 644 aaKnown RBP eCLIP15.87■□□□□ 0.13
PRKCSH-210ENST00000589990 ZGPATQ8N5A5 531 aaKnown RBP15.87■□□□□ 0.13
PRKCSH-210ENST00000589990 FLRT1Q9NZU1 646 aa15.87■□□□□ 0.13
PRKCSH-210ENST00000589990 NDUFB9Q9Y6M9 179 aa15.87■□□□□ 0.13
PRKCSH-210ENST00000589990 XRCC5P13010 732 aaKnown RBP15.86■□□□□ 0.13
PRKCSH-210ENST00000589990 IL15P40933 162 aaPredicted RBP15.86■□□□□ 0.13
PRKCSH-210ENST00000589990 ATN1P54259 1190 aaPredicted RBP15.86■□□□□ 0.13
PRKCSH-210ENST00000589990 MORN1Q5T089 497 aa15.86■□□□□ 0.13
PRKCSH-210ENST00000589990 GPRC5AQ8NFJ5 357 aa15.86■□□□□ 0.13
PRKCSH-210ENST00000589990 CDX2Q99626 313 aaPredicted RBP15.86■□□□□ 0.13
PRKCSH-210ENST00000589990 DNAJC18Q9H819 358 aa15.86■□□□□ 0.13
PRKCSH-210ENST00000589990 NPM3O75607 178 aaKnown RBP15.85■□□□□ 0.13
PRKCSH-210ENST00000589990 BACE1P56817 501 aa15.85■□□□□ 0.13
PRKCSH-210ENST00000589990 ERICH6Q7L0X2 663 aa15.85■□□□□ 0.13
PRKCSH-210ENST00000589990 GPR142Q7Z601 462 aa15.85■□□□□ 0.13
PRKCSH-210ENST00000589990 SLF2Q8IX21 1173 aa15.85■□□□□ 0.13
PRKCSH-210ENST00000589990 SOCS4Q8WXH5 440 aa15.85■□□□□ 0.13
PRKCSH-210ENST00000589990 NSUN4Q96CB9 384 aaKnown RBP15.85■□□□□ 0.13
PRKCSH-210ENST00000589990 XAGE2Q96GT9 111 aa15.85■□□□□ 0.13
PRKCSH-210ENST00000589990 PAGR1Q9BTK6 254 aa15.85■□□□□ 0.13
PRKCSH-210ENST00000589990 SENP6Q9GZR1 1112 aaPredicted RBP15.85■□□□□ 0.13
PRKCSH-210ENST00000589990 FBXO3Q9UK99 471 aa15.85■□□□□ 0.13
PRKCSH-210ENST00000589990 PDS5AQ29RF7 1337 aaKnown RBP15.85■□□□□ 0.13
PRKCSH-210ENST00000589990 ZNF521Q96K83 1311 aa15.85■□□□□ 0.13
PRKCSH-210ENST00000589990 A0A1B0GUL7 405 aa15.84■□□□□ 0.13
PRKCSH-210ENST00000589990 ZBTB22O15209 634 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms