RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 CTR9Q6PD62 1173 aa17.39■□□□□ 0.37
SCAMP4-209ENST00000585335 EPB41L4AQ9HCS5 686 aaPredicted RBP17.39■□□□□ 0.37
SCAMP4-209ENST00000585335 ANGEL1Q9UNK9 670 aaKnown RBP17.39■□□□□ 0.37
SCAMP4-209ENST00000585335 SSC5DA1L4H1 1573 aa17.38■□□□□ 0.37
SCAMP4-209ENST00000585335 MINDY4BA8MYZ0 360 aa17.38■□□□□ 0.37
SCAMP4-209ENST00000585335 C12orf60Q5U649 245 aa17.38■□□□□ 0.37
SCAMP4-209ENST00000585335 CST9Q5W186 159 aa17.38■□□□□ 0.37
SCAMP4-209ENST00000585335 MIGA2Q7L4E1 593 aa17.38■□□□□ 0.37
SCAMP4-209ENST00000585335 ZNF287Q9HBT7 754 aa17.38■□□□□ 0.37
SCAMP4-209ENST00000585335 ANO2Q9NQ90 1003 aa17.38■□□□□ 0.37
SCAMP4-209ENST00000585335 SWAP70Q9UH65 585 aa17.38■□□□□ 0.37
SCAMP4-209ENST00000585335 ABT1Q9ULW3 272 aaKnown RBP17.38■□□□□ 0.37
SCAMP4-209ENST00000585335 BAZ2AQ9UIF9 1905 aaKnown RBP17.37■□□□□ 0.37
SCAMP4-209ENST00000585335 UNCXA6NJT0 531 aa17.37■□□□□ 0.37
SCAMP4-209ENST00000585335 REC8O95072 547 aa17.37■□□□□ 0.37
SCAMP4-209ENST00000585335 WRNIP1Q96S55 665 aa17.37■□□□□ 0.37
SCAMP4-209ENST00000585335 CREBZFQ9NS37 354 aa17.37■□□□□ 0.37
SCAMP4-209ENST00000585335 CSADQ9Y600 493 aa17.37■□□□□ 0.37
SCAMP4-209ENST00000585335 U3KPZ7 1027 aaPredicted RBP17.37■□□□□ 0.37
SCAMP4-209ENST00000585335 FGAP02671 866 aa17.36■□□□□ 0.37
SCAMP4-209ENST00000585335 CYP2D6P10635 497 aa17.36■□□□□ 0.37
SCAMP4-209ENST00000585335 PLCD1P51178 756 aa17.36■□□□□ 0.37
SCAMP4-209ENST00000585335 MAP3K10Q02779 954 aa17.36■□□□□ 0.37
SCAMP4-209ENST00000585335 MAP3K11Q16584 847 aa17.36■□□□□ 0.37
SCAMP4-209ENST00000585335 METTL16Q86W50 562 aaKnown RBP17.36■□□□□ 0.37
SCAMP4-209ENST00000585335 ANKRD13AQ8IZ07 590 aa17.36■□□□□ 0.37
SCAMP4-209ENST00000585335 LAMB1P07942 1786 aa17.35■□□□□ 0.37
SCAMP4-209ENST00000585335 CYP2D7A0A087X1C5 515 aa17.35■□□□□ 0.37
SCAMP4-209ENST00000585335 ZNF213O14771 459 aa17.35■□□□□ 0.37
SCAMP4-209ENST00000585335 FOXP2O15409 715 aa17.35■□□□□ 0.37
SCAMP4-209ENST00000585335 USP2O75604 605 aaPredicted RBP17.35■□□□□ 0.37
SCAMP4-209ENST00000585335 HUNKP57058 714 aa17.35■□□□□ 0.37
SCAMP4-209ENST00000585335 MAP3K9P80192 1104 aa17.35■□□□□ 0.37
SCAMP4-209ENST00000585335 PDE4BQ07343 736 aa17.35■□□□□ 0.37
SCAMP4-209ENST00000585335 PPARAQ07869 468 aa17.35■□□□□ 0.37
SCAMP4-209ENST00000585335 IMMTQ16891 758 aaKnown RBP17.35■□□□□ 0.37
SCAMP4-209ENST00000585335 KLRG1Q96E93 195 aa17.35■□□□□ 0.37
SCAMP4-209ENST00000585335 IL25Q9H293 177 aa17.35■□□□□ 0.37
SCAMP4-209ENST00000585335 TLL2Q9Y6L7 1015 aa17.35■□□□□ 0.37
SCAMP4-209ENST00000585335 ROBO3Q96MS0 1386 aa17.35■□□□□ 0.37
SCAMP4-209ENST00000585335 UBE2Q2LH0YL09 131 aa17.34■□□□□ 0.37
SCAMP4-209ENST00000585335 C16orf86Q6ZW13 317 aa17.34■□□□□ 0.37
SCAMP4-209ENST00000585335 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.34■□□□□ 0.37
SCAMP4-209ENST00000585335 MKNK2Q9HBH9 465 aa17.34■□□□□ 0.37
SCAMP4-209ENST00000585335 ZNF112Q9UJU3 913 aa17.34■□□□□ 0.37
SCAMP4-209ENST00000585335 FAM196BA6NMK8 535 aa17.33■□□□□ 0.36
SCAMP4-209ENST00000585335 CTNND1O60716 968 aaKnown RBP17.33■□□□□ 0.36
SCAMP4-209ENST00000585335 PCP11498 1178 aaKnown RBP17.33■□□□□ 0.36
SCAMP4-209ENST00000585335 HSPA6P17066 643 aa17.33■□□□□ 0.36
SCAMP4-209ENST00000585335 PTH1RQ03431 593 aa17.33■□□□□ 0.36
SCAMP4-209ENST00000585335 GABPAQ06546 454 aa17.33■□□□□ 0.36
SCAMP4-209ENST00000585335 SAPCD2Q86UD0 394 aa17.33■□□□□ 0.36
SCAMP4-209ENST00000585335 HHIPL1Q96JK4 782 aa17.33■□□□□ 0.36
SCAMP4-209ENST00000585335 RNF41Q9H4P4 317 aaPredicted RBP17.33■□□□□ 0.36
SCAMP4-209ENST00000585335 PICK1Q9NRD5 415 aa17.33■□□□□ 0.36
SCAMP4-209ENST00000585335 GINM1Q9NU53 330 aa17.33■□□□□ 0.36
SCAMP4-209ENST00000585335 ANAPC4Q9UJX5 808 aa17.33■□□□□ 0.36
SCAMP4-209ENST00000585335 CDK8P49336 464 aa17.32■□□□□ 0.36
SCAMP4-209ENST00000585335 CERKLQ49MI3 558 aaPredicted RBP17.32■□□□□ 0.36
SCAMP4-209ENST00000585335 LDLRAD1Q5T700 205 aa17.32■□□□□ 0.36
SCAMP4-209ENST00000585335 MOB2Q70IA6 237 aa17.32■□□□□ 0.36
SCAMP4-209ENST00000585335 MAP4K1Q92918 833 aa17.32■□□□□ 0.36
SCAMP4-209ENST00000585335 SLC10A4Q96EP9 437 aa17.32■□□□□ 0.36
SCAMP4-209ENST00000585335 DYNLL2Q96FJ2 89 aa17.32■□□□□ 0.36
SCAMP4-209ENST00000585335 LSG1Q9H089 658 aaKnown RBP17.32■□□□□ 0.36
SCAMP4-209ENST00000585335 DNAJC18Q9H819 358 aa17.32■□□□□ 0.36
SCAMP4-209ENST00000585335 CABP5Q9NP86 173 aa17.32■□□□□ 0.36
SCAMP4-209ENST00000585335 FZD1Q9UP38 647 aa17.32■□□□□ 0.36
SCAMP4-209ENST00000585335 SIPA1L1O43166 1804 aa17.32■□□□□ 0.36
SCAMP4-209ENST00000585335 PHF20L1A8MW92 1017 aa17.31■□□□□ 0.36
SCAMP4-209ENST00000585335 CAP2P40123 477 aa17.31■□□□□ 0.36
SCAMP4-209ENST00000585335 HAND2P61296 217 aa17.31■□□□□ 0.36
SCAMP4-209ENST00000585335 VGLL4Q14135 290 aa17.31■□□□□ 0.36
SCAMP4-209ENST00000585335 NOL9Q5SY16 702 aaKnown RBP17.31■□□□□ 0.36
SCAMP4-209ENST00000585335 RNF20Q5VTR2 975 aa17.31■□□□□ 0.36
SCAMP4-209ENST00000585335 TATDN1Q6P1N9 297 aa17.31■□□□□ 0.36
SCAMP4-209ENST00000585335 PAXIP1Q6ZW49 1069 aaPredicted RBP17.31■□□□□ 0.36
SCAMP4-209ENST00000585335 SCYL3Q8IZE3 742 aa17.31■□□□□ 0.36
SCAMP4-209ENST00000585335 CCDC17Q96LX7 622 aa17.31■□□□□ 0.36
SCAMP4-209ENST00000585335 RBM8AQ9Y5S9 174 aaKnown RBP17.31■□□□□ 0.36
SCAMP4-209ENST00000585335 EPB41L2O43491 1005 aaKnown RBP17.3■□□□□ 0.36
SCAMP4-209ENST00000585335 ASNSP08243 561 aa17.3■□□□□ 0.36
SCAMP4-209ENST00000585335 INPP5BP32019 993 aa17.3■□□□□ 0.36
SCAMP4-209ENST00000585335 SHMT1P34896 483 aa17.3■□□□□ 0.36
SCAMP4-209ENST00000585335 NT5C2P49902 561 aa17.3■□□□□ 0.36
SCAMP4-209ENST00000585335 ZNF157P51786 506 aaPredicted RBP17.3■□□□□ 0.36
SCAMP4-209ENST00000585335 CTDSPL2Q05D32 466 aa17.3■□□□□ 0.36
SCAMP4-209ENST00000585335 ABCB5Q2M3G0 1257 aa17.3■□□□□ 0.36
SCAMP4-209ENST00000585335 RGMBQ6NW40 437 aa17.3■□□□□ 0.36
SCAMP4-209ENST00000585335 MFSD6Q6ZSS7 791 aa17.3■□□□□ 0.36
SCAMP4-209ENST00000585335 ZNF444Q8N0Y2 327 aaPredicted RBP17.3■□□□□ 0.36
SCAMP4-209ENST00000585335 STK11IPQ8N1F8 1099 aa17.3■□□□□ 0.36
SCAMP4-209ENST00000585335 ZKSCAN4Q969J2 545 aaPredicted RBP17.3■□□□□ 0.36
SCAMP4-209ENST00000585335 TOMM22Q9NS69 142 aa17.3■□□□□ 0.36
SCAMP4-209ENST00000585335 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.3■□□□□ 0.36
SCAMP4-209ENST00000585335 LAMA4Q16363 1823 aa17.29■□□□□ 0.36
SCAMP4-209ENST00000585335 MPHOSPH10O00566 681 aaKnown RBP17.29■□□□□ 0.36
SCAMP4-209ENST00000585335 MCCP23508 829 aa17.29■□□□□ 0.36
SCAMP4-209ENST00000585335 EVX2Q03828 476 aa17.29■□□□□ 0.36
SCAMP4-209ENST00000585335 DEFB115Q30KQ5 88 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms