RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 KCTD15Q96SI1 283 aaPredicted RBP10.22□□□□□ -0.77
PPP4R1-225ENST00000583438 CDV3Q9UKY7 258 aaKnown RBP10.22□□□□□ -0.77
PPP4R1-225ENST00000583438 MAP4K5Q9Y4K4 846 aa10.22□□□□□ -0.77
PPP4R1-225ENST00000583438 PCDHAC2Q9Y5I4 1007 aa10.22□□□□□ -0.77
PPP4R1-225ENST00000583438 IRS2Q9Y4H2 1338 aa10.22□□□□□ -0.77
PPP4R1-225ENST00000583438 UBE2Q2LH0YL09 131 aa10.21□□□□□ -0.77
PPP4R1-225ENST00000583438 SNAP23O00161 211 aa10.21□□□□□ -0.77
PPP4R1-225ENST00000583438 GDF9O60383 454 aa10.21□□□□□ -0.77
PPP4R1-225ENST00000583438 PCCAP05165 728 aaPredicted RBP10.21□□□□□ -0.77
PPP4R1-225ENST00000583438 LMOD3Q0VAK6 560 aa10.21□□□□□ -0.77
PPP4R1-225ENST00000583438 NBPF20Q3BBV1 942 aa10.21□□□□□ -0.77
PPP4R1-225ENST00000583438 HYPKQ9NX55 129 aa10.21□□□□□ -0.77
PPP4R1-225ENST00000583438 SAGE1Q9NXZ1 904 aa10.21□□□□□ -0.77
PPP4R1-225ENST00000583438 APAF1O14727 1248 aa10.2□□□□□ -0.78
PPP4R1-225ENST00000583438 SKIP12755 728 aa10.2□□□□□ -0.78
PPP4R1-225ENST00000583438 GRM5P41594 1212 aa10.2□□□□□ -0.78
PPP4R1-225ENST00000583438 CWF19L2Q2TBE0 894 aaKnown RBP10.2□□□□□ -0.78
PPP4R1-225ENST00000583438 DACT2Q5SW24 774 aa10.2□□□□□ -0.78
PPP4R1-225ENST00000583438 TRIM67Q6ZTA4 783 aa10.2□□□□□ -0.78
PPP4R1-225ENST00000583438 RNF135Q8IUD6 432 aa10.2□□□□□ -0.78
PPP4R1-225ENST00000583438 DCPSQ96C86 337 aaKnown RBP10.2□□□□□ -0.78
PPP4R1-225ENST00000583438 TMX4Q9H1E5 349 aaPredicted RBP10.2□□□□□ -0.78
PPP4R1-225ENST00000583438 PNNQ9H307 717 aaKnown RBP10.2□□□□□ -0.78
PPP4R1-225ENST00000583438 GREM2Q9H772 168 aa10.2□□□□□ -0.78
PPP4R1-225ENST00000583438 MYOZ2Q9NPC6 264 aa10.2□□□□□ -0.78
PPP4R1-225ENST00000583438 GGA1Q9UJY5 639 aa10.2□□□□□ -0.78
PPP4R1-225ENST00000583438 MED23Q9ULK4 1368 aa10.19□□□□□ -0.78
PPP4R1-225ENST00000583438 TNFRSF10AO00220 468 aa10.19□□□□□ -0.78
PPP4R1-225ENST00000583438 ATP9BO43861 1147 aa10.19□□□□□ -0.78
PPP4R1-225ENST00000583438 PDE8AO60658 829 aa10.19□□□□□ -0.78
PPP4R1-225ENST00000583438 SASH1O94885 1247 aa10.19□□□□□ -0.78
PPP4R1-225ENST00000583438 TBC1D8O95759 1140 aa10.19□□□□□ -0.78
PPP4R1-225ENST00000583438 CASP7P55210 303 aa10.19□□□□□ -0.78
PPP4R1-225ENST00000583438 C2orf69Q8N8R5 385 aa10.19□□□□□ -0.78
PPP4R1-225ENST00000583438 TTLL11Q8NHH1 800 aa10.19□□□□□ -0.78
PPP4R1-225ENST00000583438 TSR2Q969E8 191 aaKnown RBP10.19□□□□□ -0.78
PPP4R1-225ENST00000583438 METTL22Q9BUU2 404 aaPredicted RBP10.19□□□□□ -0.78
PPP4R1-225ENST00000583438 KIAA0100Q14667 2235 aaKnown RBP10.18□□□□□ -0.78
PPP4R1-225ENST00000583438 XDHP47989 1333 aa10.18□□□□□ -0.78
PPP4R1-225ENST00000583438 WNT10BO00744 389 aa10.18□□□□□ -0.78
PPP4R1-225ENST00000583438 RFX1P22670 979 aa10.18□□□□□ -0.78
PPP4R1-225ENST00000583438 CTSWP56202 376 aa10.18□□□□□ -0.78
PPP4R1-225ENST00000583438 RAB15P59190 212 aa10.18□□□□□ -0.78
PPP4R1-225ENST00000583438 INTS6LQ5JSJ4 861 aaKnown RBP10.18□□□□□ -0.78
PPP4R1-225ENST00000583438 CERS5Q8N5B7 392 aa10.18□□□□□ -0.78
PPP4R1-225ENST00000583438 CCDC191Q8NCU4 936 aa10.18□□□□□ -0.78
PPP4R1-225ENST00000583438 AGBL3Q8NEM8 1001 aa10.18□□□□□ -0.78
PPP4R1-225ENST00000583438 ZNF296Q8WUU4 475 aaPredicted RBP10.18□□□□□ -0.78
PPP4R1-225ENST00000583438 ZBED3Q96IU2 234 aaPredicted RBP10.18□□□□□ -0.78
PPP4R1-225ENST00000583438 EYA3Q99504 573 aa10.18□□□□□ -0.78
PPP4R1-225ENST00000583438 ZC3H12CQ9C0D7 883 aaKnown RBP10.18□□□□□ -0.78
PPP4R1-225ENST00000583438 ANKIB1Q9P2G1 1089 aa10.18□□□□□ -0.78
PPP4R1-225ENST00000583438 MINPP1Q9UNW1 487 aa10.18□□□□□ -0.78
PPP4R1-225ENST00000583438 MAP3K2Q9Y2U5 619 aa10.18□□□□□ -0.78
PPP4R1-225ENST00000583438 MAFBQ9Y5Q3 323 aaPredicted RBP10.18□□□□□ -0.78
PPP4R1-225ENST00000583438 PITPNM2Q9BZ72 1349 aa10.17□□□□□ -0.78
PPP4R1-225ENST00000583438 ADH1CP00326 375 aa10.17□□□□□ -0.78
PPP4R1-225ENST00000583438 FSHRP23945 695 aa10.17□□□□□ -0.78
PPP4R1-225ENST00000583438 TRAF7Q6Q0C0 670 aa10.17□□□□□ -0.78
PPP4R1-225ENST00000583438 PLPP7Q8NBV4 271 aa10.17□□□□□ -0.78
PPP4R1-225ENST00000583438 PRKRIP1Q9H875 184 aaPredicted RBP10.17□□□□□ -0.78
PPP4R1-225ENST00000583438 IFT57Q9NWB7 429 aa10.17□□□□□ -0.78
PPP4R1-225ENST00000583438 CWC25Q9NXE8 425 aaPredicted RBP10.17□□□□□ -0.78
PPP4R1-225ENST00000583438 PI4KAP2A4QPH2 592 aa10.16□□□□□ -0.78
PPP4R1-225ENST00000583438 USP17L3A6NCW0 530 aa10.16□□□□□ -0.78
PPP4R1-225ENST00000583438 USP17L4A6NCW7 530 aa10.16□□□□□ -0.78
PPP4R1-225ENST00000583438 NEURL1BA8MQ27 555 aa10.16□□□□□ -0.78
PPP4R1-225ENST00000583438 RGS20O76081 388 aa10.16□□□□□ -0.78
PPP4R1-225ENST00000583438 ALDH1A1P00352 501 aa10.16□□□□□ -0.78
PPP4R1-225ENST00000583438 PTPN12Q05209 780 aaKnown RBP10.16□□□□□ -0.78
PPP4R1-225ENST00000583438 CCDC152Q4G0S7 254 aa10.16□□□□□ -0.78
PPP4R1-225ENST00000583438 USP17L1Q7RTZ2 530 aa10.16□□□□□ -0.78
PPP4R1-225ENST00000583438 CTU1Q7Z7A3 348 aaKnown RBP10.16□□□□□ -0.78
PPP4R1-225ENST00000583438 DEPDC4Q8N2C3 294 aa10.16□□□□□ -0.78
PPP4R1-225ENST00000583438 PI4KAP1Q8N8J0 262 aa10.16□□□□□ -0.78
PPP4R1-225ENST00000583438 SNIP1Q8TAD8 396 aaKnown RBP10.16□□□□□ -0.78
PPP4R1-225ENST00000583438 MYH13Q9UKX3 1938 aa10.15□□□□□ -0.78
PPP4R1-225ENST00000583438 USP17L5A8MUK1 530 aa10.15□□□□□ -0.78
PPP4R1-225ENST00000583438 NR3C2P08235 984 aa10.15□□□□□ -0.78
PPP4R1-225ENST00000583438 CCT4P50991 539 aaKnown RBP10.15□□□□□ -0.78
PPP4R1-225ENST00000583438 PRKG1Q13976 671 aa10.15□□□□□ -0.78
PPP4R1-225ENST00000583438 RNF20Q5VTR2 975 aa10.15□□□□□ -0.78
PPP4R1-225ENST00000583438 ANKRD18AQ8IVF6 992 aa10.15□□□□□ -0.78
PPP4R1-225ENST00000583438 CLMNQ96JQ2 1002 aa10.15□□□□□ -0.78
PPP4R1-225ENST00000583438 H7C1W4 665 aa10.14□□□□□ -0.79
PPP4R1-225ENST00000583438 J3QL48 77 aa10.14□□□□□ -0.79
PPP4R1-225ENST00000583438 ERVH48-1M5A8F1 160 aa10.14□□□□□ -0.79
PPP4R1-225ENST00000583438 ATP2B4P23634 1241 aa10.14□□□□□ -0.79
PPP4R1-225ENST00000583438 TM4SF4P48230 202 aa10.14□□□□□ -0.79
PPP4R1-225ENST00000583438 WDR43Q15061 677 aaKnown RBP eCLIP10.14□□□□□ -0.79
PPP4R1-225ENST00000583438 USP17L2Q6R6M4 530 aa10.14□□□□□ -0.79
PPP4R1-225ENST00000583438 UBE3BQ7Z3V4 1068 aa10.14□□□□□ -0.79
PPP4R1-225ENST00000583438 KIAA0825Q8IV33 1275 aa10.14□□□□□ -0.79
PPP4R1-225ENST00000583438 BSDC1Q9NW68 430 aaPredicted RBP10.14□□□□□ -0.79
PPP4R1-225ENST00000583438 TOR4AQ9NXH8 423 aa10.14□□□□□ -0.79
PPP4R1-225ENST00000583438 SZT2Q5T011 3432 aa10.13□□□□□ -0.79
PPP4R1-225ENST00000583438 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.13□□□□□ -0.79
PPP4R1-225ENST00000583438 GPR25O00155 361 aa10.13□□□□□ -0.79
PPP4R1-225ENST00000583438 IGF2BP3O00425 579 aaKnown RBP eCLIP10.13□□□□□ -0.79
PPP4R1-225ENST00000583438 PRR20EP86478 221 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms