RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 ANP32CO43423 234 aa23.76■■□□□ 1.39
NDEL1-209ENST00000580738 TBC1D12O60347 775 aa23.76■■□□□ 1.39
NDEL1-209ENST00000580738 UBTFL1P0CB47 393 aaPredicted RBP23.76■■□□□ 1.39
NDEL1-209ENST00000580738 GCLCP48506 637 aaPredicted RBP23.76■■□□□ 1.39
NDEL1-209ENST00000580738 HMGCS2P54868 508 aa23.76■■□□□ 1.39
NDEL1-209ENST00000580738 TIMM10P62072 90 aa23.76■■□□□ 1.39
NDEL1-209ENST00000580738 GPR153Q6NV75 609 aa23.76■■□□□ 1.39
NDEL1-209ENST00000580738 SLF2Q8IX21 1173 aa23.76■■□□□ 1.39
NDEL1-209ENST00000580738 ZNF384Q8TF68 577 aa23.76■■□□□ 1.39
NDEL1-209ENST00000580738 MROH7-TTC4A0A0A0MT08 1334 aa23.76■■□□□ 1.39
NDEL1-209ENST00000580738 GPR75-ASB3A0A0A6YYF3 556 aa23.75■■□□□ 1.39
NDEL1-209ENST00000580738 MAGEA10P43363 369 aaPredicted RBP23.75■■□□□ 1.39
NDEL1-209ENST00000580738 MECOMQ03112 1051 aa23.75■■□□□ 1.39
NDEL1-209ENST00000580738 RRP1BQ14684 758 aaKnown RBP23.75■■□□□ 1.39
NDEL1-209ENST00000580738 ZNF280CQ8ND82 737 aa23.75■■□□□ 1.39
NDEL1-209ENST00000580738 ASCC2Q9H1I8 757 aaPredicted RBP23.75■■□□□ 1.39
NDEL1-209ENST00000580738 SPTY2D1Q68D10 685 aaPredicted RBP23.74■■□□□ 1.39
NDEL1-209ENST00000580738 OSBPL5Q9H0X9 879 aaPredicted RBP23.74■■□□□ 1.39
NDEL1-209ENST00000580738 C11orf49Q9H6J7 331 aa23.74■■□□□ 1.39
NDEL1-209ENST00000580738 LRIT3Q3SXY7 679 aa23.73■■□□□ 1.39
NDEL1-209ENST00000580738 TRIB2Q92519 343 aa23.73■■□□□ 1.39
NDEL1-209ENST00000580738 PDS5AQ29RF7 1337 aaKnown RBP23.73■■□□□ 1.39
NDEL1-209ENST00000580738 PEX10O60683 326 aa23.72■■□□□ 1.39
NDEL1-209ENST00000580738 TDHQ8IZJ6 230 aa23.72■■□□□ 1.39
NDEL1-209ENST00000580738 MTMR10Q9NXD2 777 aa23.72■■□□□ 1.39
NDEL1-209ENST00000580738 OGDHLQ9ULD0 1010 aa23.72■■□□□ 1.39
NDEL1-209ENST00000580738 NPM3O75607 178 aaKnown RBP23.71■■□□□ 1.39
NDEL1-209ENST00000580738 CAP2P40123 477 aa23.71■■□□□ 1.39
NDEL1-209ENST00000580738 PABPC4Q13310 644 aaKnown RBP eCLIP23.71■■□□□ 1.39
NDEL1-209ENST00000580738 ERICH6Q7L0X2 663 aa23.71■■□□□ 1.39
NDEL1-209ENST00000580738 COPRSQ9NQ92 184 aa23.71■■□□□ 1.39
NDEL1-209ENST00000580738 STXBP5LQ9Y2K9 1186 aa23.71■■□□□ 1.39
NDEL1-209ENST00000580738 UNC80Q8N2C7 3258 aa23.7■■□□□ 1.38
NDEL1-209ENST00000580738 PFASO15067 1338 aa23.7■■□□□ 1.38
NDEL1-209ENST00000580738 CYP2B6P20813 491 aa23.7■■□□□ 1.38
NDEL1-209ENST00000580738 SH3D19Q5HYK7 790 aa23.7■■□□□ 1.38
NDEL1-209ENST00000580738 XAGE2Q96GT9 111 aa23.7■■□□□ 1.38
NDEL1-209ENST00000580738 UBE2OQ9C0C9 1292 aaKnown RBP23.7■■□□□ 1.38
NDEL1-209ENST00000580738 MORF4L1Q9UBU8 362 aa23.7■■□□□ 1.38
NDEL1-209ENST00000580738 LOC285556D6RIA3 1793 aa23.7■■□□□ 1.38
NDEL1-209ENST00000580738 DDX60LQ5H9U9 1706 aaKnown RBP23.7■■□□□ 1.38
NDEL1-209ENST00000580738 A0A1B0GUL7 405 aa23.69■■□□□ 1.38
NDEL1-209ENST00000580738 USP17L5A8MUK1 530 aa23.69■■□□□ 1.38
NDEL1-209ENST00000580738 PRKAR2AP13861 404 aaKnown RBP23.69■■□□□ 1.38
NDEL1-209ENST00000580738 MAP3K21Q5TCX8 1036 aa23.69■■□□□ 1.38
NDEL1-209ENST00000580738 PI16Q6UXB8 463 aa23.69■■□□□ 1.38
NDEL1-209ENST00000580738 TBC1D9Q6ZT07 1266 aa23.69■■□□□ 1.38
NDEL1-209ENST00000580738 TFCP2Q12800 502 aa23.68■■□□□ 1.38
NDEL1-209ENST00000580738 TBC1D2Q9BYX2 928 aa23.68■■□□□ 1.38
NDEL1-209ENST00000580738 SMC4Q9NTJ3 1288 aa23.68■■□□□ 1.38
NDEL1-209ENST00000580738 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.68■■□□□ 1.38
NDEL1-209ENST00000580738 E9PSI1 815 aa23.67■■□□□ 1.38
NDEL1-209ENST00000580738 ALDH1L2Q3SY69 923 aa23.67■■□□□ 1.38
NDEL1-209ENST00000580738 NSUN4Q96CB9 384 aaKnown RBP23.67■■□□□ 1.38
NDEL1-209ENST00000580738 P2RX7Q99572 595 aaKnown RBP23.67■■□□□ 1.38
NDEL1-209ENST00000580738 TXNRD2Q9NNW7 524 aa23.67■■□□□ 1.38
NDEL1-209ENST00000580738 HMG20BQ9P0W2 317 aa23.67■■□□□ 1.38
NDEL1-209ENST00000580738 PLXNB2O15031 1838 aa23.67■■□□□ 1.38
NDEL1-209ENST00000580738 MTMR2Q13614 643 aa23.66■■□□□ 1.38
NDEL1-209ENST00000580738 MVPQ14764 893 aaKnown RBP23.66■■□□□ 1.38
NDEL1-209ENST00000580738 COL2A1P02458 1487 aaPredicted RBP23.65■■□□□ 1.38
NDEL1-209ENST00000580738 COL6A1P12109 1028 aa23.65■■□□□ 1.38
NDEL1-209ENST00000580738 IRX3P78415 501 aaPredicted RBP23.65■■□□□ 1.38
NDEL1-209ENST00000580738 JAG1P78504 1218 aa23.65■■□□□ 1.38
NDEL1-209ENST00000580738 MEIS3Q99687 375 aa23.65■■□□□ 1.38
NDEL1-209ENST00000580738 NUDT12Q9BQG2 462 aa23.65■■□□□ 1.38
NDEL1-209ENST00000580738 AS3MTQ9HBK9 375 aa23.65■■□□□ 1.38
NDEL1-209ENST00000580738 MAP4K4O95819 1239 aaPredicted RBP23.64■■□□□ 1.37
NDEL1-209ENST00000580738 LDHCP07864 332 aa23.64■■□□□ 1.37
NDEL1-209ENST00000580738 XRCC5P13010 732 aaKnown RBP23.64■■□□□ 1.37
NDEL1-209ENST00000580738 GSTO1P78417 241 aa23.64■■□□□ 1.37
NDEL1-209ENST00000580738 CACNB2Q08289 660 aaPredicted RBP23.64■■□□□ 1.37
NDEL1-209ENST00000580738 SLFN5Q08AF3 891 aa23.64■■□□□ 1.37
NDEL1-209ENST00000580738 TEX11Q8IYF3 940 aa23.64■■□□□ 1.37
NDEL1-209ENST00000580738 SPATA5Q8NB90 893 aa23.64■■□□□ 1.37
NDEL1-209ENST00000580738 NEUROD6Q96NK8 337 aa23.64■■□□□ 1.37
NDEL1-209ENST00000580738 WDR18Q9BV38 432 aa23.64■■□□□ 1.37
NDEL1-209ENST00000580738 RAI14Q9P0K7 980 aa23.64■■□□□ 1.37
NDEL1-209ENST00000580738 NOB1Q9ULX3 412 aaKnown RBP23.64■■□□□ 1.37
NDEL1-209ENST00000580738 AKAP2Q9Y2D5 859 aa23.64■■□□□ 1.37
NDEL1-209ENST00000580738 HOXA7P31268 230 aaPredicted RBP23.63■■□□□ 1.37
NDEL1-209ENST00000580738 BACE1P56817 501 aa23.63■■□□□ 1.37
NDEL1-209ENST00000580738 LRRC26Q2I0M4 334 aa23.63■■□□□ 1.37
NDEL1-209ENST00000580738 LHX8Q68G74 356 aa23.63■■□□□ 1.37
NDEL1-209ENST00000580738 GPRC5AQ8NFJ5 357 aa23.63■■□□□ 1.37
NDEL1-209ENST00000580738 SH3RF3Q8TEJ3 882 aaPredicted RBP23.63■■□□□ 1.37
NDEL1-209ENST00000580738 RBPJLQ9UBG7 517 aa23.63■■□□□ 1.37
NDEL1-209ENST00000580738 HERC5Q9UII4 1024 aaKnown RBP23.63■■□□□ 1.37
NDEL1-209ENST00000580738 ATAD5Q96QE3 1844 aa23.62■■□□□ 1.37
NDEL1-209ENST00000580738 CCND3P30281 292 aaPredicted RBP23.62■■□□□ 1.37
NDEL1-209ENST00000580738 HERVK_113P62684 666 aa23.62■■□□□ 1.37
NDEL1-209ENST00000580738 MDM2Q00987 491 aaPredicted RBP23.62■■□□□ 1.37
NDEL1-209ENST00000580738 CCL14Q16627 93 aa23.62■■□□□ 1.37
NDEL1-209ENST00000580738 SHROOM1Q2M3G4 852 aaPredicted RBP23.62■■□□□ 1.37
NDEL1-209ENST00000580738 Q3C1V9 767 aa23.62■■□□□ 1.37
NDEL1-209ENST00000580738 SOCS4Q8WXH5 440 aa23.62■■□□□ 1.37
NDEL1-209ENST00000580738 USP6NLQ92738 828 aa23.62■■□□□ 1.37
NDEL1-209ENST00000580738 TMOD4Q9NZQ9 345 aa23.62■■□□□ 1.37
NDEL1-209ENST00000580738 ZKSCAN1P17029 563 aaPredicted RBP23.61■■□□□ 1.37
NDEL1-209ENST00000580738 CDCA7LQ96GN5 454 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms