RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 TBC1D12O60347 775 aa12.58□□□□□ -0.4
NPLOC4-220ENST00000576940 CIAO1O76071 339 aa12.58□□□□□ -0.4
NPLOC4-220ENST00000576940 RHBDL3P58872 404 aa12.58□□□□□ -0.4
NPLOC4-220ENST00000576940 TDHQ8IZJ6 230 aa12.58□□□□□ -0.4
NPLOC4-220ENST00000576940 ZGPATQ8N5A5 531 aaKnown RBP12.58□□□□□ -0.4
NPLOC4-220ENST00000576940 PROCA1Q8NCQ7 364 aaPredicted RBP12.58□□□□□ -0.4
NPLOC4-220ENST00000576940 ZNF280CQ8ND82 737 aa12.58□□□□□ -0.4
NPLOC4-220ENST00000576940 TRIB2Q92519 343 aa12.58□□□□□ -0.4
NPLOC4-220ENST00000576940 ASCC2Q9H1I8 757 aaPredicted RBP12.58□□□□□ -0.4
NPLOC4-220ENST00000576940 OGDHLQ9ULD0 1010 aa12.58□□□□□ -0.4
NPLOC4-220ENST00000576940 CUL9Q8IWT3 2517 aa12.58□□□□□ -0.4
NPLOC4-220ENST00000576940 DOCK2Q92608 1830 aa12.58□□□□□ -0.4
NPLOC4-220ENST00000576940 GPR75-ASB3A0A0A6YYF3 556 aa12.57□□□□□ -0.4
NPLOC4-220ENST00000576940 IL15P40933 162 aaPredicted RBP12.57□□□□□ -0.4
NPLOC4-220ENST00000576940 GCLCP48506 637 aaPredicted RBP12.57□□□□□ -0.4
NPLOC4-220ENST00000576940 MECOMQ03112 1051 aa12.57□□□□□ -0.4
NPLOC4-220ENST00000576940 RASGRF1Q13972 1273 aa12.57□□□□□ -0.4
NPLOC4-220ENST00000576940 SLF2Q8IX21 1173 aa12.57□□□□□ -0.4
NPLOC4-220ENST00000576940 ZNF384Q8TF68 577 aa12.57□□□□□ -0.4
NPLOC4-220ENST00000576940 UBE2OQ9C0C9 1292 aaKnown RBP12.57□□□□□ -0.4
NPLOC4-220ENST00000576940 OSBPL5Q9H0X9 879 aaPredicted RBP12.57□□□□□ -0.4
NPLOC4-220ENST00000576940 FBXO3Q9UK99 471 aa12.57□□□□□ -0.4
NPLOC4-220ENST00000576940 CAP2P40123 477 aa12.56□□□□□ -0.4
NPLOC4-220ENST00000576940 ERICH6Q7L0X2 663 aa12.56□□□□□ -0.4
NPLOC4-220ENST00000576940 P2RX7Q99572 595 aaKnown RBP12.56□□□□□ -0.4
NPLOC4-220ENST00000576940 COL25A1Q9BXS0 654 aaPredicted RBP12.56□□□□□ -0.4
NPLOC4-220ENST00000576940 DOCK1Q14185 1865 aa12.56□□□□□ -0.4
NPLOC4-220ENST00000576940 MROH7-TTC4A0A0A0MT08 1334 aa12.56□□□□□ -0.4
NPLOC4-220ENST00000576940 PFASO15067 1338 aa12.56□□□□□ -0.4
NPLOC4-220ENST00000576940 USP17L5A8MUK1 530 aa12.55□□□□□ -0.4
NPLOC4-220ENST00000576940 UBTFL1P0CB47 393 aaPredicted RBP12.55□□□□□ -0.4
NPLOC4-220ENST00000576940 PRKAR2AP13861 404 aaKnown RBP12.55□□□□□ -0.4
NPLOC4-220ENST00000576940 PABPC4Q13310 644 aaKnown RBP eCLIP12.55□□□□□ -0.4
NPLOC4-220ENST00000576940 Q3C1V9 767 aa12.55□□□□□ -0.4
NPLOC4-220ENST00000576940 SH3D19Q5HYK7 790 aa12.55□□□□□ -0.4
NPLOC4-220ENST00000576940 SPTY2D1Q68D10 685 aaPredicted RBP12.55□□□□□ -0.4
NPLOC4-220ENST00000576940 TBC1D9Q6ZT07 1266 aa12.55□□□□□ -0.4
NPLOC4-220ENST00000576940 XAGE2Q96GT9 111 aa12.55□□□□□ -0.4
NPLOC4-220ENST00000576940 TXNRD2Q9NNW7 524 aa12.55□□□□□ -0.4
NPLOC4-220ENST00000576940 ZNF521Q96K83 1311 aa12.55□□□□□ -0.4
NPLOC4-220ENST00000576940 ZBTB22O15209 634 aa12.54□□□□□ -0.4
NPLOC4-220ENST00000576940 ANP32CO43423 234 aa12.54□□□□□ -0.4
NPLOC4-220ENST00000576940 JAG1P78504 1218 aa12.54□□□□□ -0.4
NPLOC4-220ENST00000576940 MDM2Q00987 491 aaPredicted RBP12.54□□□□□ -0.4
NPLOC4-220ENST00000576940 CACNB2Q08289 660 aaPredicted RBP12.54□□□□□ -0.4
NPLOC4-220ENST00000576940 MAP3K21Q5TCX8 1036 aa12.54□□□□□ -0.4
NPLOC4-220ENST00000576940 NUDT12Q9BQG2 462 aa12.54□□□□□ -0.4
NPLOC4-220ENST00000576940 COPRSQ9NQ92 184 aa12.54□□□□□ -0.4
NPLOC4-220ENST00000576940 MORF4L1Q9UBU8 362 aa12.54□□□□□ -0.4
NPLOC4-220ENST00000576940 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.54□□□□□ -0.4
NPLOC4-220ENST00000576940 VCANP13611 3396 aa12.54□□□□□ -0.4
NPLOC4-220ENST00000576940 DDX60LQ5H9U9 1706 aaKnown RBP12.54□□□□□ -0.4
NPLOC4-220ENST00000576940 PLXNB2O15031 1838 aa12.53□□□□□ -0.4
NPLOC4-220ENST00000576940 A0A1B0GUL7 405 aa12.53□□□□□ -0.4
NPLOC4-220ENST00000576940 NPM3O75607 178 aaKnown RBP12.53□□□□□ -0.4
NPLOC4-220ENST00000576940 COL6A1P12109 1028 aa12.53□□□□□ -0.4
NPLOC4-220ENST00000576940 CCND3P30281 292 aaPredicted RBP12.53□□□□□ -0.4
NPLOC4-220ENST00000576940 TFCP2Q12800 502 aa12.53□□□□□ -0.4
NPLOC4-220ENST00000576940 CCL14Q16627 93 aa12.53□□□□□ -0.4
NPLOC4-220ENST00000576940 LRRC26Q2I0M4 334 aa12.53□□□□□ -0.4
NPLOC4-220ENST00000576940 LHX8Q68G74 356 aa12.53□□□□□ -0.4
NPLOC4-220ENST00000576940 PI16Q6UXB8 463 aa12.53□□□□□ -0.4
NPLOC4-220ENST00000576940 GPRC5AQ8NFJ5 357 aa12.53□□□□□ -0.4
NPLOC4-220ENST00000576940 NSUN4Q96CB9 384 aaKnown RBP12.53□□□□□ -0.4
NPLOC4-220ENST00000576940 NEUROD6Q96NK8 337 aa12.53□□□□□ -0.4
NPLOC4-220ENST00000576940 HMG20BQ9P0W2 317 aa12.53□□□□□ -0.4
NPLOC4-220ENST00000576940 RBPJLQ9UBG7 517 aa12.53□□□□□ -0.4
NPLOC4-220ENST00000576940 LDHCP07864 332 aa12.52□□□□□ -0.41
NPLOC4-220ENST00000576940 BACE1P56817 501 aa12.52□□□□□ -0.41
NPLOC4-220ENST00000576940 IRX3P78415 501 aaPredicted RBP12.52□□□□□ -0.41
NPLOC4-220ENST00000576940 MTMR2Q13614 643 aa12.52□□□□□ -0.41
NPLOC4-220ENST00000576940 SHROOM1Q2M3G4 852 aaPredicted RBP12.52□□□□□ -0.41
NPLOC4-220ENST00000576940 FAM161BQ96MY7 647 aa12.52□□□□□ -0.41
NPLOC4-220ENST00000576940 TBC1D2Q9BYX2 928 aa12.52□□□□□ -0.41
NPLOC4-220ENST00000576940 AS3MTQ9HBK9 375 aa12.52□□□□□ -0.41
NPLOC4-220ENST00000576940 POTEB2H3BUK9 544 aa12.51□□□□□ -0.41
NPLOC4-220ENST00000576940 XRCC5P13010 732 aaKnown RBP12.51□□□□□ -0.41
NPLOC4-220ENST00000576940 HOXA7P31268 230 aaPredicted RBP12.51□□□□□ -0.41
NPLOC4-220ENST00000576940 HERVK_113P62684 666 aa12.51□□□□□ -0.41
NPLOC4-220ENST00000576940 POTEEQ6S8J3 1075 aa12.51□□□□□ -0.41
NPLOC4-220ENST00000576940 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.51□□□□□ -0.41
NPLOC4-220ENST00000576940 TEX11Q8IYF3 940 aa12.51□□□□□ -0.41
NPLOC4-220ENST00000576940 SPATA5Q8NB90 893 aa12.51□□□□□ -0.41
NPLOC4-220ENST00000576940 SH3RF3Q8TEJ3 882 aaPredicted RBP12.51□□□□□ -0.41
NPLOC4-220ENST00000576940 USP6NLQ92738 828 aa12.51□□□□□ -0.41
NPLOC4-220ENST00000576940 GUCD1Q96NT3 240 aa12.51□□□□□ -0.41
NPLOC4-220ENST00000576940 WDR18Q9BV38 432 aa12.51□□□□□ -0.41
NPLOC4-220ENST00000576940 PORCNQ9H237 461 aa12.51□□□□□ -0.41
NPLOC4-220ENST00000576940 TMOD4Q9NZQ9 345 aa12.51□□□□□ -0.41
NPLOC4-220ENST00000576940 RAI14Q9P0K7 980 aa12.51□□□□□ -0.41
NPLOC4-220ENST00000576940 NOB1Q9ULX3 412 aaKnown RBP12.51□□□□□ -0.41
NPLOC4-220ENST00000576940 PDS5AQ29RF7 1337 aaKnown RBP12.51□□□□□ -0.41
NPLOC4-220ENST00000576940 LAMA2P24043 3122 aaKnown RBP12.5□□□□□ -0.41
NPLOC4-220ENST00000576940 ZKSCAN1P17029 563 aaPredicted RBP12.5□□□□□ -0.41
NPLOC4-220ENST00000576940 GSTO1P78417 241 aa12.5□□□□□ -0.41
NPLOC4-220ENST00000576940 MVPQ14764 893 aaKnown RBP12.5□□□□□ -0.41
NPLOC4-220ENST00000576940 ALDH1L2Q3SY69 923 aa12.5□□□□□ -0.41
NPLOC4-220ENST00000576940 GPR142Q7Z601 462 aa12.5□□□□□ -0.41
NPLOC4-220ENST00000576940 CDCA7LQ96GN5 454 aa12.5□□□□□ -0.41
NPLOC4-220ENST00000576940 MEIS3Q99687 375 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms