RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 FZD1Q9UP38 647 aa16.7■□□□□ 0.26
RPAIN-217ENST00000575711 TRPM7Q96QT4 1865 aa16.69■□□□□ 0.26
RPAIN-217ENST00000575711 FOXP2O15409 715 aa16.69■□□□□ 0.26
RPAIN-217ENST00000575711 USP2O75604 605 aaPredicted RBP16.69■□□□□ 0.26
RPAIN-217ENST00000575711 CYP2D6P10635 497 aa16.69■□□□□ 0.26
RPAIN-217ENST00000575711 HSPA6P17066 643 aa16.69■□□□□ 0.26
RPAIN-217ENST00000575711 PLCD1P51178 756 aa16.69■□□□□ 0.26
RPAIN-217ENST00000575711 ALX1Q15699 326 aa16.69■□□□□ 0.26
RPAIN-217ENST00000575711 MAP3K11Q16584 847 aa16.69■□□□□ 0.26
RPAIN-217ENST00000575711 SBK1Q52WX2 424 aa16.69■□□□□ 0.26
RPAIN-217ENST00000575711 C12orf60Q5U649 245 aa16.69■□□□□ 0.26
RPAIN-217ENST00000575711 MOB2Q70IA6 237 aa16.69■□□□□ 0.26
RPAIN-217ENST00000575711 DSCC1Q9BVC3 393 aa16.69■□□□□ 0.26
RPAIN-217ENST00000575711 SERPINB13Q9UIV8 391 aa16.69■□□□□ 0.26
RPAIN-217ENST00000575711 DDX60LQ5H9U9 1706 aaKnown RBP16.69■□□□□ 0.26
RPAIN-217ENST00000575711 FAM196BA6NMK8 535 aa16.68■□□□□ 0.26
RPAIN-217ENST00000575711 MINDY4BA8MYZ0 360 aa16.68■□□□□ 0.26
RPAIN-217ENST00000575711 UBE2Q2LH0YL09 131 aa16.68■□□□□ 0.26
RPAIN-217ENST00000575711 HUNKP57058 714 aa16.68■□□□□ 0.26
RPAIN-217ENST00000575711 MAP3K10Q02779 954 aa16.68■□□□□ 0.26
RPAIN-217ENST00000575711 KIAA1211Q6ZU35 1233 aa16.68■□□□□ 0.26
RPAIN-217ENST00000575711 SAPCD2Q86UD0 394 aa16.68■□□□□ 0.26
RPAIN-217ENST00000575711 METTL16Q86W50 562 aaKnown RBP16.68■□□□□ 0.26
RPAIN-217ENST00000575711 KLRG1Q96E93 195 aa16.68■□□□□ 0.26
RPAIN-217ENST00000575711 WRNIP1Q96S55 665 aa16.68■□□□□ 0.26
RPAIN-217ENST00000575711 TAOK2Q9UL54 1235 aa16.68■□□□□ 0.26
RPAIN-217ENST00000575711 TLL2Q9Y6L7 1015 aa16.68■□□□□ 0.26
RPAIN-217ENST00000575711 ZMYM6O95789 1325 aa16.68■□□□□ 0.26
RPAIN-217ENST00000575711 MYH1P12882 1939 aa16.67■□□□□ 0.26
RPAIN-217ENST00000575711 CYP2D7A0A087X1C5 515 aa16.67■□□□□ 0.26
RPAIN-217ENST00000575711 FGAP02671 866 aa16.67■□□□□ 0.26
RPAIN-217ENST00000575711 ANKRD13AQ8IZ07 590 aa16.67■□□□□ 0.26
RPAIN-217ENST00000575711 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.67■□□□□ 0.26
RPAIN-217ENST00000575711 CSADQ9Y600 493 aa16.67■□□□□ 0.26
RPAIN-217ENST00000575711 UNCXA6NJT0 531 aa16.66■□□□□ 0.26
RPAIN-217ENST00000575711 SLC3A2P08195 630 aaKnown RBP16.66■□□□□ 0.26
RPAIN-217ENST00000575711 SLURP2P0DP57 97 aa16.66■□□□□ 0.26
RPAIN-217ENST00000575711 MAP3K9P80192 1104 aa16.66■□□□□ 0.26
RPAIN-217ENST00000575711 EVX2Q03828 476 aa16.66■□□□□ 0.26
RPAIN-217ENST00000575711 LDLRAD1Q5T700 205 aa16.66■□□□□ 0.26
RPAIN-217ENST00000575711 DNAJC18Q9H819 358 aa16.66■□□□□ 0.26
RPAIN-217ENST00000575711 SWAP70Q9UH65 585 aa16.66■□□□□ 0.26
RPAIN-217ENST00000575711 CTNNA3Q9UI47 895 aa16.66■□□□□ 0.26
RPAIN-217ENST00000575711 ZNF112Q9UJU3 913 aa16.66■□□□□ 0.26
RPAIN-217ENST00000575711 PHF20L1A8MW92 1017 aa16.65■□□□□ 0.26
RPAIN-217ENST00000575711 GABPAQ06546 454 aa16.65■□□□□ 0.26
RPAIN-217ENST00000575711 PPARAQ07869 468 aa16.65■□□□□ 0.26
RPAIN-217ENST00000575711 DYNLL2Q96FJ2 89 aa16.65■□□□□ 0.26
RPAIN-217ENST00000575711 ANO2Q9NQ90 1003 aa16.65■□□□□ 0.26
RPAIN-217ENST00000575711 ROBO3Q96MS0 1386 aa16.64■□□□□ 0.26
RPAIN-217ENST00000575711 INPP5BP32019 993 aa16.64■□□□□ 0.25
RPAIN-217ENST00000575711 PTH1RQ03431 593 aa16.64■□□□□ 0.25
RPAIN-217ENST00000575711 VGLL4Q14135 290 aa16.64■□□□□ 0.25
RPAIN-217ENST00000575711 TATDN1Q6P1N9 297 aa16.64■□□□□ 0.25
RPAIN-217ENST00000575711 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.64■□□□□ 0.25
RPAIN-217ENST00000575711 C16orf86Q6ZW13 317 aa16.64■□□□□ 0.25
RPAIN-217ENST00000575711 HHIPL1Q96JK4 782 aa16.64■□□□□ 0.25
RPAIN-217ENST00000575711 ZNF287Q9HBT7 754 aa16.64■□□□□ 0.25
RPAIN-217ENST00000575711 U3KPZ7 1027 aaPredicted RBP16.64■□□□□ 0.25
RPAIN-217ENST00000575711 BAZ2AQ9UIF9 1905 aaKnown RBP16.64■□□□□ 0.25
RPAIN-217ENST00000575711 SIPA1L1O43166 1804 aa16.63■□□□□ 0.25
RPAIN-217ENST00000575711 SMIM22K7EJ46 135 aa16.63■□□□□ 0.25
RPAIN-217ENST00000575711 ZNF213O14771 459 aa16.63■□□□□ 0.25
RPAIN-217ENST00000575711 CTNND1O60716 968 aaKnown RBP16.63■□□□□ 0.25
RPAIN-217ENST00000575711 IMMTQ16891 758 aaKnown RBP16.63■□□□□ 0.25
RPAIN-217ENST00000575711 NOL9Q5SY16 702 aaKnown RBP16.63■□□□□ 0.25
RPAIN-217ENST00000575711 RGMBQ6NW40 437 aa16.63■□□□□ 0.25
RPAIN-217ENST00000575711 PAXIP1Q6ZW49 1069 aaPredicted RBP16.63■□□□□ 0.25
RPAIN-217ENST00000575711 SCYL3Q8IZE3 742 aa16.63■□□□□ 0.25
RPAIN-217ENST00000575711 STK11IPQ8N1F8 1099 aa16.63■□□□□ 0.25
RPAIN-217ENST00000575711 SLC44A5Q8NCS7 719 aa16.63■□□□□ 0.25
RPAIN-217ENST00000575711 ZKSCAN4Q969J2 545 aaPredicted RBP16.63■□□□□ 0.25
RPAIN-217ENST00000575711 LSG1Q9H089 658 aaKnown RBP16.63■□□□□ 0.25
RPAIN-217ENST00000575711 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.63■□□□□ 0.25
RPAIN-217ENST00000575711 ANAPC4Q9UJX5 808 aa16.63■□□□□ 0.25
RPAIN-217ENST00000575711 RASSF10A6NK89 507 aa16.62■□□□□ 0.25
RPAIN-217ENST00000575711 SHMT1P34896 483 aa16.62■□□□□ 0.25
RPAIN-217ENST00000575711 CAP2P40123 477 aa16.62■□□□□ 0.25
RPAIN-217ENST00000575711 CDK8P49336 464 aa16.62■□□□□ 0.25
RPAIN-217ENST00000575711 ZNF157P51786 506 aaPredicted RBP16.62■□□□□ 0.25
RPAIN-217ENST00000575711 HAND2P61296 217 aa16.62■□□□□ 0.25
RPAIN-217ENST00000575711 HTRA3P83110 453 aa16.62■□□□□ 0.25
RPAIN-217ENST00000575711 PDE4BQ07343 736 aa16.62■□□□□ 0.25
RPAIN-217ENST00000575711 DEFB115Q30KQ5 88 aa16.62■□□□□ 0.25
RPAIN-217ENST00000575711 CERKLQ49MI3 558 aaPredicted RBP16.62■□□□□ 0.25
RPAIN-217ENST00000575711 MAP4K1Q92918 833 aa16.62■□□□□ 0.25
RPAIN-217ENST00000575711 SLC10A4Q96EP9 437 aa16.62■□□□□ 0.25
RPAIN-217ENST00000575711 CLMNQ96JQ2 1002 aa16.62■□□□□ 0.25
RPAIN-217ENST00000575711 ELP3Q9H9T3 547 aa16.62■□□□□ 0.25
RPAIN-217ENST00000575711 MKNK2Q9HBH9 465 aa16.62■□□□□ 0.25
RPAIN-217ENST00000575711 PICK1Q9NRD5 415 aa16.62■□□□□ 0.25
RPAIN-217ENST00000575711 REC8O95072 547 aa16.61■□□□□ 0.25
RPAIN-217ENST00000575711 GDF11O95390 407 aa16.61■□□□□ 0.25
RPAIN-217ENST00000575711 CTDSPL2Q05D32 466 aa16.61■□□□□ 0.25
RPAIN-217ENST00000575711 GINM1Q9NU53 330 aa16.61■□□□□ 0.25
RPAIN-217ENST00000575711 SNCAIPQ9Y6H5 919 aa16.61■□□□□ 0.25
RPAIN-217ENST00000575711 LAMB1P07942 1786 aa16.61■□□□□ 0.25
RPAIN-217ENST00000575711 EIF5BO60841 1220 aaKnown RBP16.6■□□□□ 0.25
RPAIN-217ENST00000575711 ASNSP08243 561 aa16.6■□□□□ 0.25
RPAIN-217ENST00000575711 ECE1P42892 770 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms