RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 ALDH1L2Q3SY69 923 aa24.62■■□□□ 1.53
CCDC40-206ENST00000572083 SPTY2D1Q68D10 685 aaPredicted RBP24.62■■□□□ 1.53
CCDC40-206ENST00000572083 ZNF384Q8TF68 577 aa24.62■■□□□ 1.53
CCDC40-206ENST00000572083 DDX60LQ5H9U9 1706 aaKnown RBP24.61■■□□□ 1.53
CCDC40-206ENST00000572083 TBC1D12O60347 775 aa24.61■■□□□ 1.53
CCDC40-206ENST00000572083 ZNF280CQ8ND82 737 aa24.61■■□□□ 1.53
CCDC40-206ENST00000572083 GDF15Q99988 308 aa24.61■■□□□ 1.53
CCDC40-206ENST00000572083 COPRSQ9NQ92 184 aa24.61■■□□□ 1.53
CCDC40-206ENST00000572083 GPR75-ASB3A0A0A6YYF3 556 aa24.6■■□□□ 1.53
CCDC40-206ENST00000572083 ERICH6Q7L0X2 663 aa24.6■■□□□ 1.53
CCDC40-206ENST00000572083 ANKLE1Q8NAG6 615 aa24.6■■□□□ 1.53
CCDC40-206ENST00000572083 OSBPL5Q9H0X9 879 aaPredicted RBP24.6■■□□□ 1.53
CCDC40-206ENST00000572083 A0A1B0GUL7 405 aa24.59■■□□□ 1.53
CCDC40-206ENST00000572083 SYN1P17600 705 aa24.59■■□□□ 1.53
CCDC40-206ENST00000572083 GCLCP48506 637 aaPredicted RBP24.59■■□□□ 1.53
CCDC40-206ENST00000572083 XAGE2Q96GT9 111 aa24.59■■□□□ 1.53
CCDC40-206ENST00000572083 ASCC2Q9H1I8 757 aaPredicted RBP24.59■■□□□ 1.53
CCDC40-206ENST00000572083 HMX1Q9NP08 348 aaPredicted RBP24.59■■□□□ 1.53
CCDC40-206ENST00000572083 GJD2Q9UKL4 321 aa24.59■■□□□ 1.53
CCDC40-206ENST00000572083 RPTORQ8N122 1335 aa24.59■■□□□ 1.53
CCDC40-206ENST00000572083 PLXNB2O15031 1838 aa24.58■■□□□ 1.53
CCDC40-206ENST00000572083 PABPC4Q13310 644 aaKnown RBP eCLIP24.58■■□□□ 1.53
CCDC40-206ENST00000572083 RRP1BQ14684 758 aaKnown RBP24.58■■□□□ 1.53
CCDC40-206ENST00000572083 PI16Q6UXB8 463 aa24.58■■□□□ 1.53
CCDC40-206ENST00000572083 NBPF3Q9H094 633 aa24.58■■□□□ 1.53
CCDC40-206ENST00000572083 UNC80Q8N2C7 3258 aa24.57■■□□□ 1.52
CCDC40-206ENST00000572083 BMP8BP34820 402 aa24.57■■□□□ 1.52
CCDC40-206ENST00000572083 MNX1P50219 401 aaPredicted RBP24.57■■□□□ 1.52
CCDC40-206ENST00000572083 SLFN5Q08AF3 891 aa24.57■■□□□ 1.52
CCDC40-206ENST00000572083 TFCP2Q12800 502 aa24.57■■□□□ 1.52
CCDC40-206ENST00000572083 MVPQ14764 893 aaKnown RBP24.57■■□□□ 1.52
CCDC40-206ENST00000572083 MEIS3Q99687 375 aa24.57■■□□□ 1.52
CCDC40-206ENST00000572083 COL2A1P02458 1487 aaPredicted RBP24.57■■□□□ 1.52
CCDC40-206ENST00000572083 NPM3O75607 178 aaKnown RBP24.56■■□□□ 1.52
CCDC40-206ENST00000572083 Q7L0L9 218 aa24.56■■□□□ 1.52
CCDC40-206ENST00000572083 TRIB2Q92519 343 aa24.56■■□□□ 1.52
CCDC40-206ENST00000572083 C11orf49Q9H6J7 331 aa24.56■■□□□ 1.52
CCDC40-206ENST00000572083 NOB1Q9ULX3 412 aaKnown RBP24.56■■□□□ 1.52
CCDC40-206ENST00000572083 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.56■■□□□ 1.52
CCDC40-206ENST00000572083 USP17L5A8MUK1 530 aa24.55■■□□□ 1.52
CCDC40-206ENST00000572083 CAP2P40123 477 aa24.55■■□□□ 1.52
CCDC40-206ENST00000572083 TBC1D9Q6ZT07 1266 aa24.55■■□□□ 1.52
CCDC40-206ENST00000572083 NSUN4Q96CB9 384 aaKnown RBP24.55■■□□□ 1.52
CCDC40-206ENST00000572083 TBC1D2Q9BYX2 928 aa24.55■■□□□ 1.52
CCDC40-206ENST00000572083 HMG20BQ9P0W2 317 aa24.55■■□□□ 1.52
CCDC40-206ENST00000572083 PEX10O60683 326 aa24.54■■□□□ 1.52
CCDC40-206ENST00000572083 MAGEA10P43363 369 aaPredicted RBP24.54■■□□□ 1.52
CCDC40-206ENST00000572083 DEFB123Q8N688 67 aa24.54■■□□□ 1.52
CCDC40-206ENST00000572083 CDCA7LQ96GN5 454 aa24.54■■□□□ 1.52
CCDC40-206ENST00000572083 NEUROD6Q96NK8 337 aa24.54■■□□□ 1.52
CCDC40-206ENST00000572083 AKAP2Q9Y2D5 859 aa24.54■■□□□ 1.52
CCDC40-206ENST00000572083 SIPA1L1O43166 1804 aa24.54■■□□□ 1.52
CCDC40-206ENST00000572083 CYP2B6P20813 491 aa24.53■■□□□ 1.52
CCDC40-206ENST00000572083 GSTO1P78417 241 aa24.53■■□□□ 1.52
CCDC40-206ENST00000572083 MTMR2Q13614 643 aa24.53■■□□□ 1.52
CCDC40-206ENST00000572083 SH3D19Q5HYK7 790 aa24.53■■□□□ 1.52
CCDC40-206ENST00000572083 AS3MTQ9HBK9 375 aa24.53■■□□□ 1.52
CCDC40-206ENST00000572083 RAI14Q9P0K7 980 aa24.53■■□□□ 1.52
CCDC40-206ENST00000572083 MORF4L1Q9UBU8 362 aa24.53■■□□□ 1.52
CCDC40-206ENST00000572083 HDAC5Q9UQL6 1122 aa24.53■■□□□ 1.52
CCDC40-206ENST00000572083 CUL9Q8IWT3 2517 aa24.52■■□□□ 1.52
CCDC40-206ENST00000572083 SRGAP3O43295 1099 aa24.52■■□□□ 1.52
CCDC40-206ENST00000572083 PRKAR2AP13861 404 aaKnown RBP24.52■■□□□ 1.52
CCDC40-206ENST00000572083 IRX3P78415 501 aaPredicted RBP24.52■■□□□ 1.52
CCDC40-206ENST00000572083 TEX11Q8IYF3 940 aa24.52■■□□□ 1.52
CCDC40-206ENST00000572083 SPATA5Q8NB90 893 aa24.52■■□□□ 1.52
CCDC40-206ENST00000572083 OGDHLQ9ULD0 1010 aa24.52■■□□□ 1.52
CCDC40-206ENST00000572083 LDHCP07864 332 aa24.51■■□□□ 1.51
CCDC40-206ENST00000572083 GPR153Q6NV75 609 aa24.51■■□□□ 1.51
CCDC40-206ENST00000572083 TDHQ8IZJ6 230 aa24.51■■□□□ 1.51
CCDC40-206ENST00000572083 API5Q9BZZ5 524 aaKnown RBP24.51■■□□□ 1.51
CCDC40-206ENST00000572083 HERC5Q9UII4 1024 aaKnown RBP24.51■■□□□ 1.51
CCDC40-206ENST00000572083 PFASO15067 1338 aa24.51■■□□□ 1.51
CCDC40-206ENST00000572083 LAMA2P24043 3122 aaKnown RBP24.5■■□□□ 1.51
CCDC40-206ENST00000572083 MAP4K4O95819 1239 aaPredicted RBP24.5■■□□□ 1.51
CCDC40-206ENST00000572083 LRIT3Q3SXY7 679 aa24.5■■□□□ 1.51
CCDC40-206ENST00000572083 GORABQ5T7V8 394 aa24.5■■□□□ 1.51
CCDC40-206ENST00000572083 MAP3K21Q5TCX8 1036 aa24.5■■□□□ 1.51
CCDC40-206ENST00000572083 SH3RF3Q8TEJ3 882 aaPredicted RBP24.5■■□□□ 1.51
CCDC40-206ENST00000572083 TXNRD2Q9NNW7 524 aa24.5■■□□□ 1.51
CCDC40-206ENST00000572083 P2RX7Q99572 595 aaKnown RBP24.49■■□□□ 1.51
CCDC40-206ENST00000572083 DNAH12Q6ZR08 3092 aa24.48■■□□□ 1.51
CCDC40-206ENST00000572083 ARID4AP29374 1257 aaPredicted RBP24.48■■□□□ 1.51
CCDC40-206ENST00000572083 MCAMP43121 646 aa24.48■■□□□ 1.51
CCDC40-206ENST00000572083 BACE1P56817 501 aa24.48■■□□□ 1.51
CCDC40-206ENST00000572083 JAG1P78504 1218 aa24.48■■□□□ 1.51
CCDC40-206ENST00000572083 SHROOM1Q2M3G4 852 aaPredicted RBP24.48■■□□□ 1.51
CCDC40-206ENST00000572083 SOCS4Q8WXH5 440 aa24.48■■□□□ 1.51
CCDC40-206ENST00000572083 NUDT12Q9BQG2 462 aa24.48■■□□□ 1.51
CCDC40-206ENST00000572083 UBE2OQ9C0C9 1292 aaKnown RBP24.48■■□□□ 1.51
CCDC40-206ENST00000572083 TMOD4Q9NZQ9 345 aa24.48■■□□□ 1.51
CCDC40-206ENST00000572083 MAST2Q6P0Q8 1798 aa24.47■■□□□ 1.51
CCDC40-206ENST00000572083 HERVK_113P62684 666 aa24.47■■□□□ 1.51
CCDC40-206ENST00000572083 WDR18Q9BV38 432 aa24.47■■□□□ 1.51
CCDC40-206ENST00000572083 DNAJC18Q9H819 358 aa24.47■■□□□ 1.51
CCDC40-206ENST00000572083 LRP2BPQ9P2M1 347 aa24.47■■□□□ 1.51
CCDC40-206ENST00000572083 ZNF316A6NFI3 1004 aaPredicted RBP24.46■■□□□ 1.51
CCDC40-206ENST00000572083 ZKSCAN1P17029 563 aaPredicted RBP24.46■■□□□ 1.51
CCDC40-206ENST00000572083 HOXA7P31268 230 aaPredicted RBP24.46■■□□□ 1.51
CCDC40-206ENST00000572083 GPRC5AQ8NFJ5 357 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms