RNA–Protein interactions for RNA: ENST00000567909.1

GINS3-209, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-209ENST00000567909 DOCK1Q14185 1865 aa15.3■□□□□ 0.04
GINS3-209ENST00000567909 SPRYD7Q5W111 196 aa15.3■□□□□ 0.04
GINS3-209ENST00000567909 CNKSR2Q8WXI2 1034 aa15.3■□□□□ 0.04
GINS3-209ENST00000567909 WNK4Q96J92 1243 aa15.3■□□□□ 0.04
GINS3-209ENST00000567909 TRIM34Q9BYJ4 488 aa15.3■□□□□ 0.04
GINS3-209ENST00000567909 ZNF112Q9UJU3 913 aa15.3■□□□□ 0.04
GINS3-209ENST00000567909 GPAA1O43292 621 aa15.29■□□□□ 0.04
GINS3-209ENST00000567909 ZMYM1Q5SVZ6 1142 aa15.29■□□□□ 0.04
GINS3-209ENST00000567909 OPTNQ96CV9 577 aa15.29■□□□□ 0.04
GINS3-209ENST00000567909 DDRGK1Q96HY6 314 aa15.29■□□□□ 0.04
GINS3-209ENST00000567909 STRBPQ96SI9 672 aaKnown RBP15.29■□□□□ 0.04
GINS3-209ENST00000567909 DCP1AQ9NPI6 582 aaPredicted RBP15.29■□□□□ 0.04
GINS3-209ENST00000567909 MCM9Q9NXL9 1143 aa15.29■□□□□ 0.04
GINS3-209ENST00000567909 SNCAIPQ9Y6H5 919 aa15.29■□□□□ 0.04
GINS3-209ENST00000567909 PHF20L1A8MW92 1017 aa15.28■□□□□ 0.04
GINS3-209ENST00000567909 TBC1D12O60347 775 aa15.28■□□□□ 0.04
GINS3-209ENST00000567909 GJA5P36382 358 aa15.28■□□□□ 0.04
GINS3-209ENST00000567909 MAP3K10Q02779 954 aa15.28■□□□□ 0.04
GINS3-209ENST00000567909 TTC22Q5TAA0 569 aa15.28■□□□□ 0.04
GINS3-209ENST00000567909 TTC6Q86TZ1 520 aa15.28■□□□□ 0.04
GINS3-209ENST00000567909 OTUD5Q96G74 571 aa15.28■□□□□ 0.04
GINS3-209ENST00000567909 ATP8A2Q9NTI2 1148 aa15.28■□□□□ 0.04
GINS3-209ENST00000567909 HERC5Q9UII4 1024 aaKnown RBP15.28■□□□□ 0.04
GINS3-209ENST00000567909 APPP05067 770 aa15.27■□□□□ 0.04
GINS3-209ENST00000567909 HSPA1AP0DMV8 641 aaKnown RBP15.27■□□□□ 0.04
GINS3-209ENST00000567909 HSPA1BP0DMV9 641 aaKnown RBP15.27■□□□□ 0.04
GINS3-209ENST00000567909 CYP2D6P10635 497 aa15.27■□□□□ 0.04
GINS3-209ENST00000567909 PLCD1P51178 756 aa15.27■□□□□ 0.04
GINS3-209ENST00000567909 MAP2K1Q02750 393 aaPredicted RBP15.27■□□□□ 0.04
GINS3-209ENST00000567909 SKAP1Q86WV1 359 aa15.27■□□□□ 0.04
GINS3-209ENST00000567909 FOXP4Q8IVH2 680 aaPredicted RBP15.27■□□□□ 0.04
GINS3-209ENST00000567909 BEGAINQ9BUH8 593 aa15.27■□□□□ 0.04
GINS3-209ENST00000567909 SPDYE5A6NIY4 337 aa15.26■□□□□ 0.03
GINS3-209ENST00000567909 CTNND1O60716 968 aaKnown RBP15.26■□□□□ 0.03
GINS3-209ENST00000567909 ZBTB48P10074 688 aaPredicted RBP15.26■□□□□ 0.03
GINS3-209ENST00000567909 GSPT1P15170 499 aaKnown RBP15.26■□□□□ 0.03
GINS3-209ENST00000567909 EVX2Q03828 476 aa15.26■□□□□ 0.03
GINS3-209ENST00000567909 NMIQ13287 307 aaPredicted RBP15.26■□□□□ 0.03
GINS3-209ENST00000567909 CCDC129Q6ZRS4 1044 aa15.26■□□□□ 0.03
GINS3-209ENST00000567909 ERO1BQ86YB8 467 aa15.26■□□□□ 0.03
GINS3-209ENST00000567909 SCYL3Q8IZE3 742 aa15.26■□□□□ 0.03
GINS3-209ENST00000567909 FAM227BQ96M60 508 aa15.26■□□□□ 0.03
GINS3-209ENST00000567909 DNAJC18Q9H819 358 aa15.26■□□□□ 0.03
GINS3-209ENST00000567909 PICK1Q9NRD5 415 aa15.26■□□□□ 0.03
GINS3-209ENST00000567909 WBP1LQ9NX94 342 aa15.26■□□□□ 0.03
GINS3-209ENST00000567909 SERPINB13Q9UIV8 391 aa15.26■□□□□ 0.03
GINS3-209ENST00000567909 LAMB1P07942 1786 aa15.26■□□□□ 0.03
GINS3-209ENST00000567909 PHIPQ8WWQ0 1821 aa15.25■□□□□ 0.03
GINS3-209ENST00000567909 CYP2D7A0A087X1C5 515 aa15.25■□□□□ 0.03
GINS3-209ENST00000567909 A0A0D9SFI3 127 aa15.25■□□□□ 0.03
GINS3-209ENST00000567909 GSG1L2A8MUP6 293 aa15.25■□□□□ 0.03
GINS3-209ENST00000567909 USP17L12C9JPN9 530 aa15.25■□□□□ 0.03
GINS3-209ENST00000567909 USP17L21D6R901 530 aa15.25■□□□□ 0.03
GINS3-209ENST00000567909 GNAT2P19087 354 aa15.25■□□□□ 0.03
GINS3-209ENST00000567909 SDSP20132 328 aa15.25■□□□□ 0.03
GINS3-209ENST00000567909 RRP1BQ14684 758 aaKnown RBP15.25■□□□□ 0.03
GINS3-209ENST00000567909 NOL9Q5SY16 702 aaKnown RBP15.25■□□□□ 0.03
GINS3-209ENST00000567909 METTL16Q86W50 562 aaKnown RBP15.25■□□□□ 0.03
GINS3-209ENST00000567909 AMOTL1Q8IY63 956 aa15.25■□□□□ 0.03
GINS3-209ENST00000567909 DIAPH3Q9NSV4 1193 aa15.25■□□□□ 0.03
GINS3-209ENST00000567909 PPP4R2Q9NY27 417 aa15.25■□□□□ 0.03
GINS3-209ENST00000567909 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.25■□□□□ 0.03
GINS3-209ENST00000567909 MANSC4A6NHS7 340 aaPredicted RBP15.24■□□□□ 0.03
GINS3-209ENST00000567909 GDF11O95390 407 aa15.24■□□□□ 0.03
GINS3-209ENST00000567909 TDO2P48775 406 aa15.24■□□□□ 0.03
GINS3-209ENST00000567909 SREBF2Q12772 1141 aa15.24■□□□□ 0.03
GINS3-209ENST00000567909 MCMDC2Q4G0Z9 681 aa15.24■□□□□ 0.03
GINS3-209ENST00000567909 ERICH6BQ5W0A0 696 aa15.24■□□□□ 0.03
GINS3-209ENST00000567909 CCDC84Q86UT8 332 aaPredicted RBP15.24■□□□□ 0.03
GINS3-209ENST00000567909 EHD4Q9H223 541 aa15.24■□□□□ 0.03
GINS3-209ENST00000567909 HELLSQ9NRZ9 838 aa15.24■□□□□ 0.03
GINS3-209ENST00000567909 PTPRFP10586 1907 aa15.23■□□□□ 0.03
GINS3-209ENST00000567909 PATL2C9JE40 543 aaKnown RBP15.23■□□□□ 0.03
GINS3-209ENST00000567909 SMIM22K7EJ46 135 aa15.23■□□□□ 0.03
GINS3-209ENST00000567909 IRF6O14896 467 aa15.23■□□□□ 0.03
GINS3-209ENST00000567909 PTPRAP18433 802 aa15.23■□□□□ 0.03
GINS3-209ENST00000567909 CAP2P40123 477 aa15.23■□□□□ 0.03
GINS3-209ENST00000567909 PPATQ06203 517 aa15.23■□□□□ 0.03
GINS3-209ENST00000567909 PPIL2Q13356 520 aa15.23■□□□□ 0.03
GINS3-209ENST00000567909 CTR9Q6PD62 1173 aa15.23■□□□□ 0.03
GINS3-209ENST00000567909 CWC27Q6UX04 472 aaKnown RBP15.23■□□□□ 0.03
GINS3-209ENST00000567909 TICAM2Q86XR7 235 aa15.23■□□□□ 0.03
GINS3-209ENST00000567909 REM2Q8IYK8 340 aaPredicted RBP15.23■□□□□ 0.03
GINS3-209ENST00000567909 DYNLL2Q96FJ2 89 aa15.23■□□□□ 0.03
GINS3-209ENST00000567909 NACAP1Q9BZK3 213 aa15.23■□□□□ 0.03
GINS3-209ENST00000567909 EPB41L4AQ9HCS5 686 aaPredicted RBP15.23■□□□□ 0.03
GINS3-209ENST00000567909 TSKSQ9UJT2 592 aa15.23■□□□□ 0.03
GINS3-209ENST00000567909 ZHX2Q9Y6X8 837 aa15.23■□□□□ 0.03
GINS3-209ENST00000567909 MINDY4BA8MYZ0 360 aa15.22■□□□□ 0.03
GINS3-209ENST00000567909 HIP1O00291 1037 aa15.22■□□□□ 0.03
GINS3-209ENST00000567909 FOXN1O15353 648 aa15.22■□□□□ 0.03
GINS3-209ENST00000567909 GTF2A2P52657 109 aa15.22■□□□□ 0.03
GINS3-209ENST00000567909 SHROOM1Q2M3G4 852 aaPredicted RBP15.22■□□□□ 0.03
GINS3-209ENST00000567909 C12orf60Q5U649 245 aa15.22■□□□□ 0.03
GINS3-209ENST00000567909 GIMAP6Q6P9H5 292 aa15.22■□□□□ 0.03
GINS3-209ENST00000567909 IFNL3Q8IZI9 196 aa15.22■□□□□ 0.03
GINS3-209ENST00000567909 STK11IPQ8N1F8 1099 aa15.22■□□□□ 0.03
GINS3-209ENST00000567909 SLC44A5Q8NCS7 719 aa15.22■□□□□ 0.03
GINS3-209ENST00000567909 ARPP21Q9UBL0 812 aaPredicted RBP15.22■□□□□ 0.03
GINS3-209ENST00000567909 CCL15-CCL14A0A0B4J2E2 113 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms