RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 ZNF165P49910 485 aa8.89□□□□□ -0.99
LINC00557-201ENST00000563184 ZBTB37Q5TC79 503 aa8.89□□□□□ -0.99
LINC00557-201ENST00000563184 DIEXFQ68CQ4 756 aaKnown RBP8.89□□□□□ -0.99
LINC00557-201ENST00000563184 GK5Q6ZS86 529 aa8.89□□□□□ -0.99
LINC00557-201ENST00000563184 DYMQ7RTS9 669 aa8.89□□□□□ -0.99
LINC00557-201ENST00000563184 TXNRD3Q86VQ6 643 aa8.89□□□□□ -0.99
LINC00557-201ENST00000563184 RNF214Q8ND24 703 aa8.89□□□□□ -0.99
LINC00557-201ENST00000563184 FAM46AQ96IP4 442 aaKnown RBP8.89□□□□□ -0.99
LINC00557-201ENST00000563184 FAM105AQ9NUU6 356 aa8.89□□□□□ -0.99
LINC00557-201ENST00000563184 PCDHB14Q9Y5E9 798 aa8.89□□□□□ -0.99
LINC00557-201ENST00000563184 K7ELQ4 463 aaPredicted RBP8.88□□□□□ -0.99
LINC00557-201ENST00000563184 GRK4P32298 578 aa8.88□□□□□ -0.99
LINC00557-201ENST00000563184 GATA4P43694 442 aa8.88□□□□□ -0.99
LINC00557-201ENST00000563184 TTLL4Q14679 1199 aa8.88□□□□□ -0.99
LINC00557-201ENST00000563184 SF3A1Q15459 793 aaKnown RBP8.88□□□□□ -0.99
LINC00557-201ENST00000563184 CCDC81Q6ZN84 652 aa8.88□□□□□ -0.99
LINC00557-201ENST00000563184 UBE3DQ7Z6J8 389 aa8.88□□□□□ -0.99
LINC00557-201ENST00000563184 DZIP1LQ8IYY4 767 aaKnown RBP8.88□□□□□ -0.99
LINC00557-201ENST00000563184 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.88□□□□□ -0.99
LINC00557-201ENST00000563184 CEP41Q9BYV8 373 aa8.88□□□□□ -0.99
LINC00557-201ENST00000563184 WNT10AQ9GZT5 417 aa8.88□□□□□ -0.99
LINC00557-201ENST00000563184 ATXN3LQ9H3M9 355 aa8.88□□□□□ -0.99
LINC00557-201ENST00000563184 ZNRF3Q9ULT6 936 aa8.88□□□□□ -0.99
LINC00557-201ENST00000563184 LOC100996750A0A140TA64 210 aa8.87□□□□□ -0.99
LINC00557-201ENST00000563184 FANCGO15287 622 aa8.87□□□□□ -0.99
LINC00557-201ENST00000563184 HTR3BO95264 441 aa8.87□□□□□ -0.99
LINC00557-201ENST00000563184 ASPAP45381 313 aa8.87□□□□□ -0.99
LINC00557-201ENST00000563184 DRC1Q96MC2 740 aa8.87□□□□□ -0.99
LINC00557-201ENST00000563184 SSBP4Q9BWG4 385 aaPredicted RBP8.87□□□□□ -0.99
LINC00557-201ENST00000563184 KRTAP4-6Q9BYQ5 205 aa8.87□□□□□ -0.99
LINC00557-201ENST00000563184 DNAJA2O60884 412 aa8.86□□□□□ -0.99
LINC00557-201ENST00000563184 HCLS1P14317 486 aaPredicted RBP8.86□□□□□ -0.99
LINC00557-201ENST00000563184 ARMC10Q8N2F6 343 aa8.86□□□□□ -0.99
LINC00557-201ENST00000563184 ISL2Q96A47 359 aa8.86□□□□□ -0.99
LINC00557-201ENST00000563184 SRRTQ9BXP5 876 aaKnown RBP8.86□□□□□ -0.99
LINC00557-201ENST00000563184 REV1Q9UBZ9 1251 aa8.86□□□□□ -0.99
LINC00557-201ENST00000563184 PLCG1P19174 1290 aa8.85□□□□□ -0.99
LINC00557-201ENST00000563184 TMEM201Q5SNT2 666 aa8.85□□□□□ -0.99
LINC00557-201ENST00000563184 CDPF1Q6NVV7 123 aa8.85□□□□□ -0.99
LINC00557-201ENST00000563184 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.85□□□□□ -0.99
LINC00557-201ENST00000563184 ACSF2Q96CM8 615 aaPredicted RBP8.85□□□□□ -0.99
LINC00557-201ENST00000563184 SHDQ96IW2 340 aa8.85□□□□□ -0.99
LINC00557-201ENST00000563184 FERD3LQ96RJ6 166 aa8.85□□□□□ -0.99
LINC00557-201ENST00000563184 ANTXR1Q9H6X2 564 aa8.85□□□□□ -0.99
LINC00557-201ENST00000563184 FBRSQ9HAH7 460 aa8.85□□□□□ -0.99
LINC00557-201ENST00000563184 STRIP2Q9ULQ0 834 aa8.85□□□□□ -0.99
LINC00557-201ENST00000563184 SART1O43290 800 aaKnown RBP8.84□□□□□ -0.99
LINC00557-201ENST00000563184 PGRP06401 933 aa8.84□□□□□ -0.99
LINC00557-201ENST00000563184 ATP2B1P20020 1258 aa8.84□□□□□ -0.99
LINC00557-201ENST00000563184 ETF1P62495 437 aaKnown RBP8.84□□□□□ -0.99
LINC00557-201ENST00000563184 PDE4BQ07343 736 aa8.84□□□□□ -0.99
LINC00557-201ENST00000563184 SGO2Q562F6 1265 aa8.84□□□□□ -0.99
LINC00557-201ENST00000563184 DHX38Q92620 1227 aaKnown RBP8.84□□□□□ -0.99
LINC00557-201ENST00000563184 ACSS3Q9H6R3 686 aa8.84□□□□□ -0.99
LINC00557-201ENST00000563184 PICK1Q9NRD5 415 aa8.84□□□□□ -0.99
LINC00557-201ENST00000563184 USP35Q9P2H5 1018 aa8.84□□□□□ -0.99
LINC00557-201ENST00000563184 ADAM30Q9UKF2 790 aa8.84□□□□□ -0.99
LINC00557-201ENST00000563184 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.83□□□□□ -1
LINC00557-201ENST00000563184 GAS2O43903 313 aaKnown RBP8.83□□□□□ -1
LINC00557-201ENST00000563184 NKG7Q16617 165 aa8.83□□□□□ -1
LINC00557-201ENST00000563184 UVSSAQ2YD98 709 aa8.83□□□□□ -1
LINC00557-201ENST00000563184 RBBP8NLQ8NC74 664 aaPredicted RBP8.83□□□□□ -1
LINC00557-201ENST00000563184 MYRFLQ96LU7 910 aa8.83□□□□□ -1
LINC00557-201ENST00000563184 TJP2Q9UDY2 1190 aa8.83□□□□□ -1
LINC00557-201ENST00000563184 MEIS3P2A8K0S8 358 aa8.82□□□□□ -1
LINC00557-201ENST00000563184 SSBP05455 408 aaKnown RBP eCLIP8.82□□□□□ -1
LINC00557-201ENST00000563184 FURINP09958 794 aa8.82□□□□□ -1
LINC00557-201ENST00000563184 RAB6AP20340 208 aa8.82□□□□□ -1
LINC00557-201ENST00000563184 ETFBP38117 255 aa8.82□□□□□ -1
LINC00557-201ENST00000563184 GIPRP48546 466 aa8.82□□□□□ -1
LINC00557-201ENST00000563184 LSRQ86X29 649 aaPredicted RBP8.82□□□□□ -1
LINC00557-201ENST00000563184 SMYD4Q8IYR2 804 aaPredicted RBP8.82□□□□□ -1
LINC00557-201ENST00000563184 FAM169BQ8N8A8 192 aa8.82□□□□□ -1
LINC00557-201ENST00000563184 ZNF507Q8TCN5 953 aa8.82□□□□□ -1
LINC00557-201ENST00000563184 FBLIM1Q8WUP2 373 aa8.82□□□□□ -1
LINC00557-201ENST00000563184 EZH1Q92800 747 aaPredicted RBP8.82□□□□□ -1
LINC00557-201ENST00000563184 ZNF408Q9H9D4 720 aa8.82□□□□□ -1
LINC00557-201ENST00000563184 PIDD1Q9HB75 910 aa8.82□□□□□ -1
LINC00557-201ENST00000563184 PPP1R1BQ9UD71 204 aaPredicted RBP8.82□□□□□ -1
LINC00557-201ENST00000563184 MRVI1Q9Y6F6 885 aa8.82□□□□□ -1
LINC00557-201ENST00000563184 SLC22A31A6NKX4 558 aa8.81□□□□□ -1
LINC00557-201ENST00000563184 RNGTTO60942 597 aaKnown RBP8.81□□□□□ -1
LINC00557-201ENST00000563184 IMPDH2P12268 514 aa8.81□□□□□ -1
LINC00557-201ENST00000563184 EIF6P56537 245 aaKnown RBP8.81□□□□□ -1
LINC00557-201ENST00000563184 SLBPQ14493 270 aaKnown RBP eCLIP8.81□□□□□ -1
LINC00557-201ENST00000563184 FBXW10Q5XX13 1052 aa8.81□□□□□ -1
LINC00557-201ENST00000563184 HID1Q8IV36 788 aa8.81□□□□□ -1
LINC00557-201ENST00000563184 CPLX3Q8WVH0 158 aa8.81□□□□□ -1
LINC00557-201ENST00000563184 UTP4Q969X6 686 aaKnown RBP8.81□□□□□ -1
LINC00557-201ENST00000563184 ARMC5Q96C12 935 aa8.81□□□□□ -1
LINC00557-201ENST00000563184 SEMA6CQ9H3T2 930 aa8.81□□□□□ -1
LINC00557-201ENST00000563184 CHURC1-FNTBB4DL54 471 aa8.8□□□□□ -1
LINC00557-201ENST00000563184 BMP3P12645 472 aa8.8□□□□□ -1
LINC00557-201ENST00000563184 GTF2F1P35269 517 aaKnown RBP eCLIP8.8□□□□□ -1
LINC00557-201ENST00000563184 USP11P51784 963 aa8.8□□□□□ -1
LINC00557-201ENST00000563184 OVOS1Q6IE37 1185 aa8.8□□□□□ -1
LINC00557-201ENST00000563184 MCATQ8IVS2 390 aaKnown RBP8.8□□□□□ -1
LINC00557-201ENST00000563184 FAM20CQ8IXL6 584 aa8.8□□□□□ -1
LINC00557-201ENST00000563184 MRPL41Q8IXM3 137 aaKnown RBP8.8□□□□□ -1
LINC00557-201ENST00000563184 TMEM40Q8WWA1 233 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms