RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 C12orf60Q5U649 245 aa19.56■□□□□ 0.72
USB1-206ENST00000562534 RGMBQ6NW40 437 aa19.56■□□□□ 0.72
USB1-206ENST00000562534 CTR9Q6PD62 1173 aa19.56■□□□□ 0.72
USB1-206ENST00000562534 CASC1Q6TDU7 716 aa19.56■□□□□ 0.72
USB1-206ENST00000562534 CCDC102AQ96A19 550 aa19.56■□□□□ 0.72
USB1-206ENST00000562534 SLC10A4Q96EP9 437 aa19.56■□□□□ 0.72
USB1-206ENST00000562534 ARPP21Q9UBL0 812 aaPredicted RBP19.56■□□□□ 0.72
USB1-206ENST00000562534 SERPINB13Q9UIV8 391 aa19.56■□□□□ 0.72
USB1-206ENST00000562534 FZD1Q9UP38 647 aa19.56■□□□□ 0.72
USB1-206ENST00000562534 HSPD1P10809 573 aaKnown RBP19.55■□□□□ 0.72
USB1-206ENST00000562534 TDO2P48775 406 aa19.55■□□□□ 0.72
USB1-206ENST00000562534 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.55■□□□□ 0.72
USB1-206ENST00000562534 WRNIP1Q96S55 665 aa19.55■□□□□ 0.72
USB1-206ENST00000562534 NAPBQ9H115 298 aa19.55■□□□□ 0.72
USB1-206ENST00000562534 CSADQ9Y600 493 aa19.55■□□□□ 0.72
USB1-206ENST00000562534 RAD50Q92878 1312 aa19.54■□□□□ 0.72
USB1-206ENST00000562534 SSC5DA1L4H1 1573 aa19.54■□□□□ 0.72
USB1-206ENST00000562534 PHF20L1A8MW92 1017 aa19.54■□□□□ 0.72
USB1-206ENST00000562534 CTNND1O60716 968 aaKnown RBP19.54■□□□□ 0.72
USB1-206ENST00000562534 ECE1P42892 770 aa19.54■□□□□ 0.72
USB1-206ENST00000562534 ZNF157P51786 506 aaPredicted RBP19.54■□□□□ 0.72
USB1-206ENST00000562534 ZNF589Q86UQ0 364 aaPredicted RBP19.54■□□□□ 0.72
USB1-206ENST00000562534 PAPPA2Q9BXP8 1791 aa19.53■□□□□ 0.72
USB1-206ENST00000562534 HTRA3P83110 453 aa19.53■□□□□ 0.72
USB1-206ENST00000562534 SLC4A8Q2Y0W8 1093 aa19.53■□□□□ 0.72
USB1-206ENST00000562534 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.53■□□□□ 0.72
USB1-206ENST00000562534 SWAP70Q9UH65 585 aa19.53■□□□□ 0.72
USB1-206ENST00000562534 MINDY4BA8MYZ0 360 aa19.52■□□□□ 0.72
USB1-206ENST00000562534 SGSM2O43147 1006 aa19.52■□□□□ 0.72
USB1-206ENST00000562534 CDC45O75419 566 aa19.52■□□□□ 0.72
USB1-206ENST00000562534 FGAP02671 866 aa19.52■□□□□ 0.72
USB1-206ENST00000562534 GABPAQ06546 454 aa19.52■□□□□ 0.72
USB1-206ENST00000562534 VPS53Q5VIR6 699 aa19.52■□□□□ 0.72
USB1-206ENST00000562534 TATDN1Q6P1N9 297 aa19.52■□□□□ 0.72
USB1-206ENST00000562534 ZKSCAN4Q969J2 545 aaPredicted RBP19.52■□□□□ 0.72
USB1-206ENST00000562534 DSCC1Q9BVC3 393 aa19.52■□□□□ 0.72
USB1-206ENST00000562534 EPB41L4AQ9HCS5 686 aaPredicted RBP19.52■□□□□ 0.72
USB1-206ENST00000562534 FOCADQ5VW36 1801 aa19.52■□□□□ 0.72
USB1-206ENST00000562534 CDK5RAP2Q96SN8 1893 aa19.52■□□□□ 0.71
USB1-206ENST00000562534 SLC3A2P08195 630 aaKnown RBP19.51■□□□□ 0.71
USB1-206ENST00000562534 CYP2D6P10635 497 aa19.51■□□□□ 0.71
USB1-206ENST00000562534 KIAA1211Q6ZU35 1233 aa19.51■□□□□ 0.71
USB1-206ENST00000562534 PAXIP1Q6ZW49 1069 aaPredicted RBP19.51■□□□□ 0.71
USB1-206ENST00000562534 ZNF287Q9HBT7 754 aa19.51■□□□□ 0.71
USB1-206ENST00000562534 GINM1Q9NU53 330 aa19.51■□□□□ 0.71
USB1-206ENST00000562534 CTNNA3Q9UI47 895 aa19.51■□□□□ 0.71
USB1-206ENST00000562534 FAM196BA6NMK8 535 aa19.5■□□□□ 0.71
USB1-206ENST00000562534 FOXP2O15409 715 aa19.5■□□□□ 0.71
USB1-206ENST00000562534 SLURP2P0DP57 97 aa19.5■□□□□ 0.71
USB1-206ENST00000562534 INPP5BP32019 993 aa19.5■□□□□ 0.71
USB1-206ENST00000562534 CAP2P40123 477 aa19.5■□□□□ 0.71
USB1-206ENST00000562534 VGLL4Q14135 290 aa19.5■□□□□ 0.71
USB1-206ENST00000562534 NOL9Q5SY16 702 aaKnown RBP19.5■□□□□ 0.71
USB1-206ENST00000562534 MYH1P12882 1939 aa19.5■□□□□ 0.71
USB1-206ENST00000562534 CYP2D7A0A087X1C5 515 aa19.49■□□□□ 0.71
USB1-206ENST00000562534 CERKLQ49MI3 558 aaPredicted RBP19.49■□□□□ 0.71
USB1-206ENST00000562534 CYP4F22Q6NT55 531 aa19.49■□□□□ 0.71
USB1-206ENST00000562534 C16orf86Q6ZW13 317 aa19.49■□□□□ 0.71
USB1-206ENST00000562534 ERO1BQ86YB8 467 aa19.49■□□□□ 0.71
USB1-206ENST00000562534 SCYL3Q8IZE3 742 aa19.49■□□□□ 0.71
USB1-206ENST00000562534 DNAJC5GQ8N7S2 189 aa19.49■□□□□ 0.71
USB1-206ENST00000562534 CLMNQ96JQ2 1002 aa19.49■□□□□ 0.71
USB1-206ENST00000562534 CAPNS2Q96L46 248 aa19.49■□□□□ 0.71
USB1-206ENST00000562534 ESYT1Q9BSJ8 1104 aa19.49■□□□□ 0.71
USB1-206ENST00000562534 DNAJC18Q9H819 358 aa19.49■□□□□ 0.71
USB1-206ENST00000562534 PICK1Q9NRD5 415 aa19.49■□□□□ 0.71
USB1-206ENST00000562534 ZMYM6O95789 1325 aa19.49■□□□□ 0.71
USB1-206ENST00000562534 CDK8P49336 464 aa19.48■□□□□ 0.71
USB1-206ENST00000562534 PPARAQ07869 468 aa19.48■□□□□ 0.71
USB1-206ENST00000562534 DYNLL2Q96FJ2 89 aa19.48■□□□□ 0.71
USB1-206ENST00000562534 CCDC17Q96LX7 622 aa19.48■□□□□ 0.71
USB1-206ENST00000562534 ELP3Q9H9T3 547 aa19.48■□□□□ 0.71
USB1-206ENST00000562534 MKNK2Q9HBH9 465 aa19.48■□□□□ 0.71
USB1-206ENST00000562534 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.48■□□□□ 0.71
USB1-206ENST00000562534 ANAPC4Q9UJX5 808 aa19.48■□□□□ 0.71
USB1-206ENST00000562534 WDR33Q9C0J8 1336 aaKnown RBP19.48■□□□□ 0.71
USB1-206ENST00000562534 ZNF213O14771 459 aa19.47■□□□□ 0.71
USB1-206ENST00000562534 ASNSP08243 561 aa19.47■□□□□ 0.71
USB1-206ENST00000562534 SLC10A3P09131 477 aa19.47■□□□□ 0.71
USB1-206ENST00000562534 ZBTB48P10074 688 aaPredicted RBP19.47■□□□□ 0.71
USB1-206ENST00000562534 SHMT1P34896 483 aa19.47■□□□□ 0.71
USB1-206ENST00000562534 MAP2K2P36507 400 aa19.47■□□□□ 0.71
USB1-206ENST00000562534 VEGFBP49765 207 aa19.47■□□□□ 0.71
USB1-206ENST00000562534 PPATQ06203 517 aa19.47■□□□□ 0.71
USB1-206ENST00000562534 PDE4BQ07343 736 aa19.47■□□□□ 0.71
USB1-206ENST00000562534 NOGQ13253 232 aa19.47■□□□□ 0.71
USB1-206ENST00000562534 SPRYD7Q5W111 196 aa19.47■□□□□ 0.71
USB1-206ENST00000562534 IL25Q9H293 177 aa19.47■□□□□ 0.71
USB1-206ENST00000562534 CABP5Q9NP86 173 aa19.47■□□□□ 0.71
USB1-206ENST00000562534 SNCAIPQ9Y6H5 919 aa19.47■□□□□ 0.71
USB1-206ENST00000562534 SPDYE5A6NIY4 337 aa19.46■□□□□ 0.71
USB1-206ENST00000562534 FAM155AB1AL88 458 aaPredicted RBP19.46■□□□□ 0.71
USB1-206ENST00000562534 EVX2Q03828 476 aa19.46■□□□□ 0.71
USB1-206ENST00000562534 GRM1Q13255 1194 aa19.46■□□□□ 0.71
USB1-206ENST00000562534 RASAL3Q86YV0 1011 aa19.46■□□□□ 0.71
USB1-206ENST00000562534 REM2Q8IYK8 340 aaPredicted RBP19.46■□□□□ 0.71
USB1-206ENST00000562534 ZNF444Q8N0Y2 327 aaPredicted RBP19.46■□□□□ 0.71
USB1-206ENST00000562534 MAP4K1Q92918 833 aa19.46■□□□□ 0.71
USB1-206ENST00000562534 OPTNQ96CV9 577 aa19.46■□□□□ 0.71
USB1-206ENST00000562534 TBC1D2Q9BYX2 928 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms