RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 CEP350Q5VT06 3117 aa16.74■□□□□ 0.27
IFT140-205ENST00000561954 PRKAB2O43741 272 aa16.74■□□□□ 0.27
IFT140-205ENST00000561954 APPP05067 770 aa16.74■□□□□ 0.27
IFT140-205ENST00000561954 MAP3K9P80192 1104 aa16.74■□□□□ 0.27
IFT140-205ENST00000561954 VGLL4Q14135 290 aa16.74■□□□□ 0.27
IFT140-205ENST00000561954 CWC27Q6UX04 472 aaKnown RBP16.74■□□□□ 0.27
IFT140-205ENST00000561954 MIGA2Q7L4E1 593 aa16.74■□□□□ 0.27
IFT140-205ENST00000561954 METTL16Q86W50 562 aaKnown RBP16.74■□□□□ 0.27
IFT140-205ENST00000561954 FOXP4Q8IVH2 680 aaPredicted RBP16.74■□□□□ 0.27
IFT140-205ENST00000561954 SEC62Q99442 399 aaKnown RBP16.74■□□□□ 0.27
IFT140-205ENST00000561954 ZNF112Q9UJU3 913 aa16.74■□□□□ 0.27
IFT140-205ENST00000561954 ZMYM6O95789 1325 aa16.73■□□□□ 0.27
IFT140-205ENST00000561954 MYH1P12882 1939 aa16.73■□□□□ 0.27
IFT140-205ENST00000561954 GSG1L2A8MUP6 293 aa16.73■□□□□ 0.27
IFT140-205ENST00000561954 PATL2C9JE40 543 aaKnown RBP16.73■□□□□ 0.27
IFT140-205ENST00000561954 SLC10A3P09131 477 aa16.73■□□□□ 0.27
IFT140-205ENST00000561954 NOGQ13253 232 aa16.73■□□□□ 0.27
IFT140-205ENST00000561954 NOL9Q5SY16 702 aaKnown RBP16.73■□□□□ 0.27
IFT140-205ENST00000561954 CASC1Q6TDU7 716 aa16.73■□□□□ 0.27
IFT140-205ENST00000561954 RASAL3Q86YV0 1011 aa16.73■□□□□ 0.27
IFT140-205ENST00000561954 CAPNS2Q96L46 248 aa16.73■□□□□ 0.27
IFT140-205ENST00000561954 NAPBQ9H115 298 aa16.73■□□□□ 0.27
IFT140-205ENST00000561954 SWAP70Q9UH65 585 aa16.73■□□□□ 0.27
IFT140-205ENST00000561954 FZD1Q9UP38 647 aa16.73■□□□□ 0.27
IFT140-205ENST00000561954 LAMB1P07942 1786 aa16.73■□□□□ 0.27
IFT140-205ENST00000561954 ROBO3Q96MS0 1386 aa16.73■□□□□ 0.27
IFT140-205ENST00000561954 SIPA1L1O43166 1804 aa16.73■□□□□ 0.27
IFT140-205ENST00000561954 ZBTB48P10074 688 aaPredicted RBP16.72■□□□□ 0.27
IFT140-205ENST00000561954 SLC4A8Q2Y0W8 1093 aa16.72■□□□□ 0.27
IFT140-205ENST00000561954 SBK1Q52WX2 424 aa16.72■□□□□ 0.27
IFT140-205ENST00000561954 CYP4F22Q6NT55 531 aa16.72■□□□□ 0.27
IFT140-205ENST00000561954 CCDC129Q6ZRS4 1044 aa16.72■□□□□ 0.27
IFT140-205ENST00000561954 SLC10A4Q96EP9 437 aa16.72■□□□□ 0.27
IFT140-205ENST00000561954 EPB41L4AQ9HCS5 686 aaPredicted RBP16.72■□□□□ 0.27
IFT140-205ENST00000561954 PICK1Q9NRD5 415 aa16.72■□□□□ 0.27
IFT140-205ENST00000561954 GINM1Q9NU53 330 aa16.72■□□□□ 0.27
IFT140-205ENST00000561954 WDR33Q9C0J8 1336 aaKnown RBP16.71■□□□□ 0.27
IFT140-205ENST00000561954 CTNND1O60716 968 aaKnown RBP16.71■□□□□ 0.27
IFT140-205ENST00000561954 CHMLP26374 656 aa16.71■□□□□ 0.27
IFT140-205ENST00000561954 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.71■□□□□ 0.27
IFT140-205ENST00000561954 ZNF589Q86UQ0 364 aaPredicted RBP16.71■□□□□ 0.27
IFT140-205ENST00000561954 SKAP1Q86WV1 359 aa16.71■□□□□ 0.27
IFT140-205ENST00000561954 SCYL3Q8IZE3 742 aa16.71■□□□□ 0.27
IFT140-205ENST00000561954 IFNL3Q8IZI9 196 aa16.71■□□□□ 0.27
IFT140-205ENST00000561954 ZNF287Q9HBT7 754 aa16.71■□□□□ 0.27
IFT140-205ENST00000561954 SNCAIPQ9Y6H5 919 aa16.71■□□□□ 0.27
IFT140-205ENST00000561954 DOCK1Q14185 1865 aa16.71■□□□□ 0.27
IFT140-205ENST00000561954 SPDYE5A6NIY4 337 aa16.7■□□□□ 0.26
IFT140-205ENST00000561954 FAM196BA6NMK8 535 aa16.7■□□□□ 0.26
IFT140-205ENST00000561954 PHF20L1A8MW92 1017 aa16.7■□□□□ 0.26
IFT140-205ENST00000561954 USP17L12C9JPN9 530 aa16.7■□□□□ 0.26
IFT140-205ENST00000561954 USP17L21D6R901 530 aa16.7■□□□□ 0.26
IFT140-205ENST00000561954 SLC3A2P08195 630 aaKnown RBP16.7■□□□□ 0.26
IFT140-205ENST00000561954 VEGFBP49765 207 aa16.7■□□□□ 0.26
IFT140-205ENST00000561954 PLCD1P51178 756 aa16.7■□□□□ 0.26
IFT140-205ENST00000561954 GRM1Q13255 1194 aa16.7■□□□□ 0.26
IFT140-205ENST00000561954 C12orf60Q5U649 245 aa16.7■□□□□ 0.26
IFT140-205ENST00000561954 CTR9Q6PD62 1173 aa16.7■□□□□ 0.26
IFT140-205ENST00000561954 ZKSCAN4Q969J2 545 aaPredicted RBP16.7■□□□□ 0.26
IFT140-205ENST00000561954 CLMNQ96JQ2 1002 aa16.7■□□□□ 0.26
IFT140-205ENST00000561954 TBC1D2Q9BYX2 928 aa16.7■□□□□ 0.26
IFT140-205ENST00000561954 DNAJC18Q9H819 358 aa16.7■□□□□ 0.26
IFT140-205ENST00000561954 ELP3Q9H9T3 547 aa16.7■□□□□ 0.26
IFT140-205ENST00000561954 CDC45O75419 566 aa16.69■□□□□ 0.26
IFT140-205ENST00000561954 INPP5BP32019 993 aa16.69■□□□□ 0.26
IFT140-205ENST00000561954 MAP2K2P36507 400 aa16.69■□□□□ 0.26
IFT140-205ENST00000561954 GABPAQ06546 454 aa16.69■□□□□ 0.26
IFT140-205ENST00000561954 ERO1BQ86YB8 467 aa16.69■□□□□ 0.26
IFT140-205ENST00000561954 REM2Q8IYK8 340 aaPredicted RBP16.69■□□□□ 0.26
IFT140-205ENST00000561954 OPTNQ96CV9 577 aa16.69■□□□□ 0.26
IFT140-205ENST00000561954 WNK4Q96J92 1243 aa16.69■□□□□ 0.26
IFT140-205ENST00000561954 FAM155AB1AL88 458 aaPredicted RBP16.68■□□□□ 0.26
IFT140-205ENST00000561954 ASNSP08243 561 aa16.68■□□□□ 0.26
IFT140-205ENST00000561954 CYP2D6P10635 497 aa16.68■□□□□ 0.26
IFT140-205ENST00000561954 HSPD1P10809 573 aaKnown RBP16.68■□□□□ 0.26
IFT140-205ENST00000561954 CAP2P40123 477 aa16.68■□□□□ 0.26
IFT140-205ENST00000561954 PPATQ06203 517 aa16.68■□□□□ 0.26
IFT140-205ENST00000561954 SREBF2Q12772 1141 aa16.68■□□□□ 0.26
IFT140-205ENST00000561954 ALX1Q15699 326 aa16.68■□□□□ 0.26
IFT140-205ENST00000561954 SPRYD7Q5W111 196 aa16.68■□□□□ 0.26
IFT140-205ENST00000561954 TATDN1Q6P1N9 297 aa16.68■□□□□ 0.26
IFT140-205ENST00000561954 C16orf86Q6ZW13 317 aa16.68■□□□□ 0.26
IFT140-205ENST00000561954 DSCC1Q9BVC3 393 aa16.68■□□□□ 0.26
IFT140-205ENST00000561954 MINDY4BA8MYZ0 360 aa16.67■□□□□ 0.26
IFT140-205ENST00000561954 FOXP2O15409 715 aa16.67■□□□□ 0.26
IFT140-205ENST00000561954 SGSM2O43147 1006 aa16.67■□□□□ 0.26
IFT140-205ENST00000561954 PPIL2Q13356 520 aa16.67■□□□□ 0.26
IFT140-205ENST00000561954 CERKLQ49MI3 558 aaPredicted RBP16.67■□□□□ 0.26
IFT140-205ENST00000561954 VPS53Q5VIR6 699 aa16.67■□□□□ 0.26
IFT140-205ENST00000561954 DNAJC5GQ8N7S2 189 aa16.67■□□□□ 0.26
IFT140-205ENST00000561954 OTUD5Q96G74 571 aa16.67■□□□□ 0.26
IFT140-205ENST00000561954 BAZ2AQ9UIF9 1905 aaKnown RBP16.66■□□□□ 0.26
IFT140-205ENST00000561954 MANSC4A6NHS7 340 aaPredicted RBP16.66■□□□□ 0.26
IFT140-205ENST00000561954 SHMT1P34896 483 aa16.66■□□□□ 0.26
IFT140-205ENST00000561954 PDE4BQ07343 736 aa16.66■□□□□ 0.26
IFT140-205ENST00000561954 PPARAQ07869 468 aa16.66■□□□□ 0.26
IFT140-205ENST00000561954 AS3MTQ9HBK9 375 aa16.66■□□□□ 0.26
IFT140-205ENST00000561954 CABP5Q9NP86 173 aa16.66■□□□□ 0.26
IFT140-205ENST00000561954 CTNNA3Q9UI47 895 aa16.66■□□□□ 0.26
IFT140-205ENST00000561954 ZBTB21Q9ULJ3 1066 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms