RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 PRAMEF27A3QJZ7 478 aa8.58□□□□□ -1.04
MARK3-220ENST00000560417 FANCGO15287 622 aa8.58□□□□□ -1.04
MARK3-220ENST00000560417 PDE4BQ07343 736 aa8.58□□□□□ -1.04
MARK3-220ENST00000560417 SERINC3Q13530 473 aa8.58□□□□□ -1.04
MARK3-220ENST00000560417 PPM1JQ5JR12 505 aa8.58□□□□□ -1.04
MARK3-220ENST00000560417 ZBTB37Q5TC79 503 aa8.58□□□□□ -1.04
MARK3-220ENST00000560417 Q6ZS46 218 aa8.58□□□□□ -1.04
MARK3-220ENST00000560417 ANKS3Q6ZW76 656 aa8.58□□□□□ -1.04
MARK3-220ENST00000560417 RNF214Q8ND24 703 aa8.58□□□□□ -1.04
MARK3-220ENST00000560417 ANTXR1Q9H6X2 564 aa8.58□□□□□ -1.04
MARK3-220ENST00000560417 SMAD7O15105 426 aaKnown RBP8.57□□□□□ -1.04
MARK3-220ENST00000560417 DNAJA2O60884 412 aa8.57□□□□□ -1.04
MARK3-220ENST00000560417 PLCG1P19174 1290 aa8.57□□□□□ -1.04
MARK3-220ENST00000560417 GRK4P32298 578 aa8.57□□□□□ -1.04
MARK3-220ENST00000560417 INSM1Q01101 510 aaPredicted RBP8.57□□□□□ -1.04
MARK3-220ENST00000560417 LRRFIP1Q32MZ4 808 aaKnown RBP8.57□□□□□ -1.04
MARK3-220ENST00000560417 AGGF1Q8N302 714 aaeCLIP8.57□□□□□ -1.04
MARK3-220ENST00000560417 PMFBP1Q8TBY8 1022 aa8.57□□□□□ -1.04
MARK3-220ENST00000560417 CRBNQ96SW2 442 aa8.57□□□□□ -1.04
MARK3-220ENST00000560417 SHROOM4Q9ULL8 1493 aa8.57□□□□□ -1.04
MARK3-220ENST00000560417 SLC22A31A6NKX4 558 aa8.56□□□□□ -1.04
MARK3-220ENST00000560417 CASP7P55210 303 aa8.56□□□□□ -1.04
MARK3-220ENST00000560417 RAB33AQ14088 237 aa8.56□□□□□ -1.04
MARK3-220ENST00000560417 CCDC144BQ3MJ40 725 aa8.56□□□□□ -1.04
MARK3-220ENST00000560417 TNNI3KQ59H18 835 aa8.56□□□□□ -1.04
MARK3-220ENST00000560417 FBXW10Q5XX13 1052 aa8.56□□□□□ -1.04
MARK3-220ENST00000560417 ANKRD34AQ69YU3 496 aa8.56□□□□□ -1.04
MARK3-220ENST00000560417 TMEM40Q8WWA1 233 aa8.56□□□□□ -1.04
MARK3-220ENST00000560417 ACSF2Q96CM8 615 aaPredicted RBP8.56□□□□□ -1.04
MARK3-220ENST00000560417 SCARF2Q96GP6 870 aaPredicted RBP8.56□□□□□ -1.04
MARK3-220ENST00000560417 ATXN3LQ9H3M9 355 aa8.56□□□□□ -1.04
MARK3-220ENST00000560417 GMIPQ9P107 970 aa8.56□□□□□ -1.04
MARK3-220ENST00000560417 PGRP06401 933 aa8.55□□□□□ -1.04
MARK3-220ENST00000560417 NEFMP07197 916 aa8.55□□□□□ -1.04
MARK3-220ENST00000560417 DRD2P14416 443 aa8.55□□□□□ -1.04
MARK3-220ENST00000560417 CDCP2Q5VXM1 449 aa8.55□□□□□ -1.04
MARK3-220ENST00000560417 TAB3Q8N5C8 712 aaPredicted RBP8.55□□□□□ -1.04
MARK3-220ENST00000560417 C19orf47Q8N9M1 422 aaKnown RBP8.55□□□□□ -1.04
MARK3-220ENST00000560417 C2CD4AQ8NCU7 369 aaPredicted RBP8.55□□□□□ -1.04
MARK3-220ENST00000560417 HNRNPLLQ8WVV9 542 aaKnown RBP8.55□□□□□ -1.04
MARK3-220ENST00000560417 OSBPL2Q9H1P3 480 aa8.55□□□□□ -1.04
MARK3-220ENST00000560417 AKTIPQ9H8T0 292 aa8.55□□□□□ -1.04
MARK3-220ENST00000560417 AP4E1Q9UPM8 1137 aa8.55□□□□□ -1.04
MARK3-220ENST00000560417 C9orf172C9J069 976 aa8.54□□□□□ -1.04
MARK3-220ENST00000560417 ALX3O95076 343 aa8.54□□□□□ -1.04
MARK3-220ENST00000560417 TTLL4Q14679 1199 aa8.54□□□□□ -1.04
MARK3-220ENST00000560417 OVOS1Q6IE37 1185 aa8.54□□□□□ -1.04
MARK3-220ENST00000560417 FDX2Q6P4F2 183 aa8.54□□□□□ -1.04
MARK3-220ENST00000560417 RUFY4Q6ZNE9 571 aa8.54□□□□□ -1.04
MARK3-220ENST00000560417 MCATQ8IVS2 390 aaKnown RBP8.54□□□□□ -1.04
MARK3-220ENST00000560417 C12orf50Q8NA57 414 aaPredicted RBP8.54□□□□□ -1.04
MARK3-220ENST00000560417 ATG4CQ96DT6 458 aa8.54□□□□□ -1.04
MARK3-220ENST00000560417 TM9SF2Q99805 663 aa8.54□□□□□ -1.04
MARK3-220ENST00000560417 TJP2Q9UDY2 1190 aa8.54□□□□□ -1.04
MARK3-220ENST00000560417 ACTL7BQ9Y614 415 aa8.54□□□□□ -1.04
MARK3-220ENST00000560417 CAP2P40123 477 aa8.53□□□□□ -1.04
MARK3-220ENST00000560417 ETF1P62495 437 aaKnown RBP8.53□□□□□ -1.04
MARK3-220ENST00000560417 MLECQ14165 292 aa8.53□□□□□ -1.04
MARK3-220ENST00000560417 INTS3Q68E01 1043 aaKnown RBP8.53□□□□□ -1.04
MARK3-220ENST00000560417 MRPL41Q8IXM3 137 aaKnown RBP8.53□□□□□ -1.04
MARK3-220ENST00000560417 ZNF507Q8TCN5 953 aa8.53□□□□□ -1.04
MARK3-220ENST00000560417 MKL1Q969V6 931 aa8.53□□□□□ -1.04
MARK3-220ENST00000560417 NACC1Q96RE7 527 aa8.53□□□□□ -1.04
MARK3-220ENST00000560417 TNKS2Q9H2K2 1166 aa8.53□□□□□ -1.04
MARK3-220ENST00000560417 PIF1Q9H611 641 aa8.53□□□□□ -1.04
MARK3-220ENST00000560417 CNNM2Q9H8M5 875 aa8.53□□□□□ -1.04
MARK3-220ENST00000560417 FBRSQ9HAH7 460 aa8.53□□□□□ -1.04
MARK3-220ENST00000560417 FAM105AQ9NUU6 356 aa8.53□□□□□ -1.04
MARK3-220ENST00000560417 TNFRSF10CO14798 259 aa8.52□□□□□ -1.05
MARK3-220ENST00000560417 ACRP10323 421 aa8.52□□□□□ -1.05
MARK3-220ENST00000560417 NME1P15531 152 aaKnown RBP8.52□□□□□ -1.05
MARK3-220ENST00000560417 GUCY2CP25092 1073 aa8.52□□□□□ -1.05
MARK3-220ENST00000560417 PREPP48147 710 aa8.52□□□□□ -1.05
MARK3-220ENST00000560417 NRG1Q02297 640 aaPredicted RBP8.52□□□□□ -1.05
MARK3-220ENST00000560417 ADGRE1Q14246 886 aa8.52□□□□□ -1.05
MARK3-220ENST00000560417 DYMQ7RTS9 669 aa8.52□□□□□ -1.05
MARK3-220ENST00000560417 UBE3DQ7Z6J8 389 aa8.52□□□□□ -1.05
MARK3-220ENST00000560417 ALYREFQ86V81 257 aaKnown RBP8.52□□□□□ -1.05
MARK3-220ENST00000560417 HID1Q8IV36 788 aa8.52□□□□□ -1.05
MARK3-220ENST00000560417 SLFN12Q8IYM2 578 aa8.52□□□□□ -1.05
MARK3-220ENST00000560417 ISL2Q96A47 359 aa8.52□□□□□ -1.05
MARK3-220ENST00000560417 SIRPGQ9P1W8 387 aa8.52□□□□□ -1.05
MARK3-220ENST00000560417 A0A1W2PQH9 124 aa8.51□□□□□ -1.05
MARK3-220ENST00000560417 CHURC1-FNTBB4DL54 471 aa8.51□□□□□ -1.05
MARK3-220ENST00000560417 HCLS1P14317 486 aaPredicted RBP8.51□□□□□ -1.05
MARK3-220ENST00000560417 NOS3P29474 1203 aa8.51□□□□□ -1.05
MARK3-220ENST00000560417 ASPAP45381 313 aa8.51□□□□□ -1.05
MARK3-220ENST00000560417 SLBPQ14493 270 aaKnown RBP eCLIP8.51□□□□□ -1.05
MARK3-220ENST00000560417 NKG7Q16617 165 aa8.51□□□□□ -1.05
MARK3-220ENST00000560417 SLC6A19Q695T7 634 aa8.51□□□□□ -1.05
MARK3-220ENST00000560417 NLRC3Q7RTR2 1065 aa8.51□□□□□ -1.05
MARK3-220ENST00000560417 NOP9Q86U38 636 aaKnown RBP8.51□□□□□ -1.05
MARK3-220ENST00000560417 CELF2-AS1Q8N7Q2 184 aa8.51□□□□□ -1.05
MARK3-220ENST00000560417 KCT2Q8NC54 265 aa8.51□□□□□ -1.05
MARK3-220ENST00000560417 WFDC12Q8WWY7 111 aa8.51□□□□□ -1.05
MARK3-220ENST00000560417 FAM46AQ96IP4 442 aaKnown RBP8.51□□□□□ -1.05
MARK3-220ENST00000560417 TMEM87BQ96K49 555 aa8.51□□□□□ -1.05
MARK3-220ENST00000560417 UBL7Q96S82 380 aaPredicted RBP8.51□□□□□ -1.05
MARK3-220ENST00000560417 PICK1Q9NRD5 415 aa8.51□□□□□ -1.05
MARK3-220ENST00000560417 ACTR10Q9NZ32 417 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms