RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 NT5C2P49902 561 aa16.38■□□□□ 0.21
SHMT2-234ENST00000557703 ALX1Q15699 326 aa16.38■□□□□ 0.21
SHMT2-234ENST00000557703 CRACR2BQ8N4Y2 399 aaPredicted RBP16.38■□□□□ 0.21
SHMT2-234ENST00000557703 CAPNS2Q96L46 248 aa16.38■□□□□ 0.21
SHMT2-234ENST00000557703 WRNIP1Q96S55 665 aa16.38■□□□□ 0.21
SHMT2-234ENST00000557703 ZMYM6O95789 1325 aa16.38■□□□□ 0.21
SHMT2-234ENST00000557703 MYH1P12882 1939 aa16.37■□□□□ 0.21
SHMT2-234ENST00000557703 PHF20L1A8MW92 1017 aa16.37■□□□□ 0.21
SHMT2-234ENST00000557703 SLC10A3P09131 477 aa16.37■□□□□ 0.21
SHMT2-234ENST00000557703 C12orf60Q5U649 245 aa16.37■□□□□ 0.21
SHMT2-234ENST00000557703 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.37■□□□□ 0.21
SHMT2-234ENST00000557703 MIGA2Q7L4E1 593 aa16.37■□□□□ 0.21
SHMT2-234ENST00000557703 ERO1BQ86YB8 467 aa16.37■□□□□ 0.21
SHMT2-234ENST00000557703 SDR42E1Q8WUS8 393 aa16.37■□□□□ 0.21
SHMT2-234ENST00000557703 WDR33Q9C0J8 1336 aaKnown RBP16.37■□□□□ 0.21
SHMT2-234ENST00000557703 APPP05067 770 aa16.36■□□□□ 0.21
SHMT2-234ENST00000557703 SLC3A2P08195 630 aaKnown RBP16.36■□□□□ 0.21
SHMT2-234ENST00000557703 PPATQ06203 517 aa16.36■□□□□ 0.21
SHMT2-234ENST00000557703 PRKG1Q13976 671 aa16.36■□□□□ 0.21
SHMT2-234ENST00000557703 TATDN1Q6P1N9 297 aa16.36■□□□□ 0.21
SHMT2-234ENST00000557703 CASC1Q6TDU7 716 aa16.36■□□□□ 0.21
SHMT2-234ENST00000557703 CDAN1Q8IWY9 1227 aa16.36■□□□□ 0.21
SHMT2-234ENST00000557703 IFNL3Q8IZI9 196 aa16.36■□□□□ 0.21
SHMT2-234ENST00000557703 CCDC171Q6TFL3 1326 aa16.36■□□□□ 0.21
SHMT2-234ENST00000557703 USP17L12C9JPN9 530 aa16.35■□□□□ 0.21
SHMT2-234ENST00000557703 USP17L21D6R901 530 aa16.35■□□□□ 0.21
SHMT2-234ENST00000557703 M0R2C6 588 aa16.35■□□□□ 0.21
SHMT2-234ENST00000557703 PRKAB2O43741 272 aa16.35■□□□□ 0.21
SHMT2-234ENST00000557703 ASNSP08243 561 aa16.35■□□□□ 0.21
SHMT2-234ENST00000557703 VEGFBP49765 207 aa16.35■□□□□ 0.21
SHMT2-234ENST00000557703 MAP2K1Q02750 393 aaPredicted RBP16.35■□□□□ 0.21
SHMT2-234ENST00000557703 GABPAQ06546 454 aa16.35■□□□□ 0.21
SHMT2-234ENST00000557703 NMIQ13287 307 aaPredicted RBP16.35■□□□□ 0.21
SHMT2-234ENST00000557703 VGLL4Q14135 290 aa16.35■□□□□ 0.21
SHMT2-234ENST00000557703 SLFNL1Q499Z3 407 aa16.35■□□□□ 0.21
SHMT2-234ENST00000557703 SCYL3Q8IZE3 742 aa16.35■□□□□ 0.21
SHMT2-234ENST00000557703 JMYQ8N9B5 988 aa16.35■□□□□ 0.21
SHMT2-234ENST00000557703 CCDC17Q96LX7 622 aa16.35■□□□□ 0.21
SHMT2-234ENST00000557703 NAPBQ9H115 298 aa16.35■□□□□ 0.21
SHMT2-234ENST00000557703 PICK1Q9NRD5 415 aa16.35■□□□□ 0.21
SHMT2-234ENST00000557703 A0A0D9SFI3 127 aa16.34■□□□□ 0.21
SHMT2-234ENST00000557703 SPDYE5A6NIY4 337 aa16.34■□□□□ 0.21
SHMT2-234ENST00000557703 FAM155AB1AL88 458 aaPredicted RBP16.34■□□□□ 0.21
SHMT2-234ENST00000557703 CHGBP05060 677 aa16.34■□□□□ 0.21
SHMT2-234ENST00000557703 PCP11498 1178 aaKnown RBP16.34■□□□□ 0.21
SHMT2-234ENST00000557703 CHMLP26374 656 aa16.34■□□□□ 0.21
SHMT2-234ENST00000557703 CAP2P40123 477 aa16.34■□□□□ 0.21
SHMT2-234ENST00000557703 TDO2P48775 406 aa16.34■□□□□ 0.21
SHMT2-234ENST00000557703 SPRYD7Q5W111 196 aa16.34■□□□□ 0.21
SHMT2-234ENST00000557703 CTR9Q6PD62 1173 aa16.34■□□□□ 0.21
SHMT2-234ENST00000557703 CWC27Q6UX04 472 aaKnown RBP16.34■□□□□ 0.21
SHMT2-234ENST00000557703 PAXIP1Q6ZW49 1069 aaPredicted RBP16.34■□□□□ 0.21
SHMT2-234ENST00000557703 MOB2Q70IA6 237 aa16.34■□□□□ 0.21
SHMT2-234ENST00000557703 RASAL3Q86YV0 1011 aa16.34■□□□□ 0.21
SHMT2-234ENST00000557703 FAM227BQ96M60 508 aa16.34■□□□□ 0.21
SHMT2-234ENST00000557703 SEC62Q99442 399 aaKnown RBP16.34■□□□□ 0.21
SHMT2-234ENST00000557703 DSCC1Q9BVC3 393 aa16.34■□□□□ 0.21
SHMT2-234ENST00000557703 SAP30BPQ9UHR5 308 aaKnown RBP16.34■□□□□ 0.21
SHMT2-234ENST00000557703 MANSC4A6NHS7 340 aaPredicted RBP16.33■□□□□ 0.2
SHMT2-234ENST00000557703 CA12O43570 354 aa16.33■□□□□ 0.2
SHMT2-234ENST00000557703 HSPD1P10809 573 aaKnown RBP16.33■□□□□ 0.2
SHMT2-234ENST00000557703 PLCD1P51178 756 aa16.33■□□□□ 0.2
SHMT2-234ENST00000557703 SREBF2Q12772 1141 aa16.33■□□□□ 0.2
SHMT2-234ENST00000557703 CYP4F22Q6NT55 531 aa16.33■□□□□ 0.2
SHMT2-234ENST00000557703 CTNNA3Q9UI47 895 aa16.33■□□□□ 0.2
SHMT2-234ENST00000557703 ANAPC4Q9UJX5 808 aa16.33■□□□□ 0.2
SHMT2-234ENST00000557703 CXCL11O14625 94 aa16.32■□□□□ 0.2
SHMT2-234ENST00000557703 EIF5BO60841 1220 aaKnown RBP16.32■□□□□ 0.2
SHMT2-234ENST00000557703 INPP5BP32019 993 aa16.32■□□□□ 0.2
SHMT2-234ENST00000557703 GTF2A2P52657 109 aa16.32■□□□□ 0.2
SHMT2-234ENST00000557703 HTRA3P83110 453 aa16.32■□□□□ 0.2
SHMT2-234ENST00000557703 PPIL2Q13356 520 aa16.32■□□□□ 0.2
SHMT2-234ENST00000557703 CERKLQ49MI3 558 aaPredicted RBP16.32■□□□□ 0.2
SHMT2-234ENST00000557703 DDX60LQ5H9U9 1706 aaKnown RBP16.32■□□□□ 0.2
SHMT2-234ENST00000557703 C16orf86Q6ZW13 317 aa16.32■□□□□ 0.2
SHMT2-234ENST00000557703 WNK4Q96J92 1243 aa16.32■□□□□ 0.2
SHMT2-234ENST00000557703 ROBO3Q96MS0 1386 aa16.32■□□□□ 0.2
SHMT2-234ENST00000557703 AS3MTQ9HBK9 375 aa16.32■□□□□ 0.2
SHMT2-234ENST00000557703 CABP5Q9NP86 173 aa16.32■□□□□ 0.2
SHMT2-234ENST00000557703 SNCAIPQ9Y6H5 919 aa16.32■□□□□ 0.2
SHMT2-234ENST00000557703 NAV1Q8NEY1 1877 aa16.31■□□□□ 0.2
SHMT2-234ENST00000557703 PTPRAP18433 802 aa16.31■□□□□ 0.2
SHMT2-234ENST00000557703 TM4SF4P48230 202 aa16.31■□□□□ 0.2
SHMT2-234ENST00000557703 PDE4BQ07343 736 aa16.31■□□□□ 0.2
SHMT2-234ENST00000557703 PPP4R3BQ5MIZ7 849 aa16.31■□□□□ 0.2
SHMT2-234ENST00000557703 OTUD7BQ6GQQ9 843 aa16.31■□□□□ 0.2
SHMT2-234ENST00000557703 ZKSCAN4Q969J2 545 aaPredicted RBP16.31■□□□□ 0.2
SHMT2-234ENST00000557703 OPTNQ96CV9 577 aa16.31■□□□□ 0.2
SHMT2-234ENST00000557703 CLMNQ96JQ2 1002 aa16.31■□□□□ 0.2
SHMT2-234ENST00000557703 DNAJC18Q9H819 358 aa16.31■□□□□ 0.2
SHMT2-234ENST00000557703 EPB41L4AQ9HCS5 686 aaPredicted RBP16.31■□□□□ 0.2
SHMT2-234ENST00000557703 ZCCHC17Q9NP64 241 aaKnown RBP16.31■□□□□ 0.2
SHMT2-234ENST00000557703 USP17L5A8MUK1 530 aa16.3■□□□□ 0.2
SHMT2-234ENST00000557703 SGSM2O43147 1006 aa16.3■□□□□ 0.2
SHMT2-234ENST00000557703 ALDH1A1P00352 501 aa16.3■□□□□ 0.2
SHMT2-234ENST00000557703 FGAP02671 866 aa16.3■□□□□ 0.2
SHMT2-234ENST00000557703 SNAPC2Q13487 334 aa16.3■□□□□ 0.2
SHMT2-234ENST00000557703 ZNF589Q86UQ0 364 aaPredicted RBP16.3■□□□□ 0.2
SHMT2-234ENST00000557703 WDR18Q9BV38 432 aa16.3■□□□□ 0.2
SHMT2-234ENST00000557703 ELP3Q9H9T3 547 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms