RNA–Protein interactions for RNA: ENST00000557253.1

RIPK3-205, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 657 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-205ENST00000557253 ABCF2Q9UG63 623 aa12□□□□□ -0.49
RIPK3-205ENST00000557253 OGDHLQ9ULD0 1010 aa12□□□□□ -0.49
RIPK3-205ENST00000557253 SALL1Q9NSC2 1324 aa12□□□□□ -0.49
RIPK3-205ENST00000557253 RFX7Q2KHR2 1363 aa12□□□□□ -0.49
RIPK3-205ENST00000557253 PRKAR2AP13861 404 aaKnown RBP11.99□□□□□ -0.49
RIPK3-205ENST00000557253 ADORA1P30542 326 aa11.99□□□□□ -0.49
RIPK3-205ENST00000557253 GCLCP48506 637 aaPredicted RBP11.99□□□□□ -0.49
RIPK3-205ENST00000557253 DZIP1Q86YF9 867 aaKnown RBP11.99□□□□□ -0.49
RIPK3-205ENST00000557253 MRPL50Q8N5N7 158 aaKnown RBP11.99□□□□□ -0.49
RIPK3-205ENST00000557253 PROCA1Q8NCQ7 364 aaPredicted RBP11.99□□□□□ -0.49
RIPK3-205ENST00000557253 GUCD1Q96NT3 240 aa11.99□□□□□ -0.49
RIPK3-205ENST00000557253 ASCC2Q9H1I8 757 aaPredicted RBP11.99□□□□□ -0.49
RIPK3-205ENST00000557253 GAKO14976 1311 aa11.99□□□□□ -0.49
RIPK3-205ENST00000557253 LOC285556D6RIA3 1793 aa11.99□□□□□ -0.49
RIPK3-205ENST00000557253 ATAD5Q96QE3 1844 aa11.98□□□□□ -0.49
RIPK3-205ENST00000557253 RRP1BQ14684 758 aaKnown RBP11.98□□□□□ -0.49
RIPK3-205ENST00000557253 LRRC26Q2I0M4 334 aa11.98□□□□□ -0.49
RIPK3-205ENST00000557253 ZNF280CQ8ND82 737 aa11.98□□□□□ -0.49
RIPK3-205ENST00000557253 CEP126Q9P2H0 1117 aa11.98□□□□□ -0.49
RIPK3-205ENST00000557253 SPTBN5Q9NRC6 3674 aaKnown RBP11.97□□□□□ -0.49
RIPK3-205ENST00000557253 MROH7-TTC4A0A0A0MT08 1334 aa11.97□□□□□ -0.49
RIPK3-205ENST00000557253 CCND3P30281 292 aaPredicted RBP11.97□□□□□ -0.49
RIPK3-205ENST00000557253 CACNB2Q08289 660 aaPredicted RBP11.97□□□□□ -0.49
RIPK3-205ENST00000557253 PABPC4Q13310 644 aaKnown RBP eCLIP11.97□□□□□ -0.49
RIPK3-205ENST00000557253 MAP3K21Q5TCX8 1036 aa11.97□□□□□ -0.49
RIPK3-205ENST00000557253 CCDC102BQ68D86 513 aa11.97□□□□□ -0.49
RIPK3-205ENST00000557253 ZGPATQ8N5A5 531 aaKnown RBP11.97□□□□□ -0.49
RIPK3-205ENST00000557253 OSBPL5Q9H0X9 879 aaPredicted RBP11.97□□□□□ -0.49
RIPK3-205ENST00000557253 PA2G4Q9UQ80 394 aaKnown RBP11.97□□□□□ -0.49
RIPK3-205ENST00000557253 POTEB2H3BUK9 544 aa11.96□□□□□ -0.49
RIPK3-205ENST00000557253 SEMA3EO15041 775 aa11.96□□□□□ -0.49
RIPK3-205ENST00000557253 TBC1D12O60347 775 aa11.96□□□□□ -0.49
RIPK3-205ENST00000557253 COL6A1P12109 1028 aa11.96□□□□□ -0.49
RIPK3-205ENST00000557253 RHBDL3P58872 404 aa11.96□□□□□ -0.49
RIPK3-205ENST00000557253 RASGRF1Q13972 1273 aa11.96□□□□□ -0.49
RIPK3-205ENST00000557253 SLF2Q8IX21 1173 aa11.96□□□□□ -0.49
RIPK3-205ENST00000557253 P2RX7Q99572 595 aaKnown RBP11.96□□□□□ -0.49
RIPK3-205ENST00000557253 NUDT12Q9BQG2 462 aa11.96□□□□□ -0.49
RIPK3-205ENST00000557253 MORF4L1Q9UBU8 362 aa11.96□□□□□ -0.49
RIPK3-205ENST00000557253 EYSQ5T1H1 3165 aa11.96□□□□□ -0.5
RIPK3-205ENST00000557253 PTPRCP08575 1304 aa11.95□□□□□ -0.5
RIPK3-205ENST00000557253 USP17L5A8MUK1 530 aa11.95□□□□□ -0.5
RIPK3-205ENST00000557253 CIAO1O76071 339 aa11.95□□□□□ -0.5
RIPK3-205ENST00000557253 CAP2P40123 477 aa11.95□□□□□ -0.5
RIPK3-205ENST00000557253 TIMM10P62072 90 aa11.95□□□□□ -0.5
RIPK3-205ENST00000557253 IRX3P78415 501 aaPredicted RBP11.95□□□□□ -0.5
RIPK3-205ENST00000557253 MECOMQ03112 1051 aa11.95□□□□□ -0.5
RIPK3-205ENST00000557253 CCL14Q16627 93 aa11.95□□□□□ -0.5
RIPK3-205ENST00000557253 ERICH6Q7L0X2 663 aa11.95□□□□□ -0.5
RIPK3-205ENST00000557253 ZNF384Q8TF68 577 aa11.95□□□□□ -0.5
RIPK3-205ENST00000557253 FAM163AQ96GL9 167 aaPredicted RBP11.95□□□□□ -0.5
RIPK3-205ENST00000557253 TXNRD2Q9NNW7 524 aa11.95□□□□□ -0.5
RIPK3-205ENST00000557253 LAMA2P24043 3122 aaKnown RBP11.94□□□□□ -0.5
RIPK3-205ENST00000557253 GPR75-ASB3A0A0A6YYF3 556 aa11.94□□□□□ -0.5
RIPK3-205ENST00000557253 ZKSCAN1P17029 563 aaPredicted RBP11.94□□□□□ -0.5
RIPK3-205ENST00000557253 MTMR2Q13614 643 aa11.94□□□□□ -0.5
RIPK3-205ENST00000557253 Q3C1V9 767 aa11.94□□□□□ -0.5
RIPK3-205ENST00000557253 SH3D19Q5HYK7 790 aa11.94□□□□□ -0.5
RIPK3-205ENST00000557253 SPTY2D1Q68D10 685 aaPredicted RBP11.94□□□□□ -0.5
RIPK3-205ENST00000557253 LHX8Q68G74 356 aa11.94□□□□□ -0.5
RIPK3-205ENST00000557253 GPRC5AQ8NFJ5 357 aa11.94□□□□□ -0.5
RIPK3-205ENST00000557253 SENP6Q9GZR1 1112 aaPredicted RBP11.94□□□□□ -0.5
RIPK3-205ENST00000557253 AS3MTQ9HBK9 375 aa11.94□□□□□ -0.5
RIPK3-205ENST00000557253 VCANP13611 3396 aa11.94□□□□□ -0.5
RIPK3-205ENST00000557253 DNAH12Q6ZR08 3092 aa11.93□□□□□ -0.5
RIPK3-205ENST00000557253 IL15P40933 162 aaPredicted RBP11.93□□□□□ -0.5
RIPK3-205ENST00000557253 HERVK_113P62684 666 aa11.93□□□□□ -0.5
RIPK3-205ENST00000557253 JAG1P78504 1218 aa11.93□□□□□ -0.5
RIPK3-205ENST00000557253 PDE3AQ14432 1141 aa11.93□□□□□ -0.5
RIPK3-205ENST00000557253 SHROOM1Q2M3G4 852 aaPredicted RBP11.93□□□□□ -0.5
RIPK3-205ENST00000557253 FAM109BQ6ICB4 259 aaPredicted RBP11.93□□□□□ -0.5
RIPK3-205ENST00000557253 TBC1D9Q6ZT07 1266 aa11.93□□□□□ -0.5
RIPK3-205ENST00000557253 SSH1Q8WYL5 1049 aa11.93□□□□□ -0.5
RIPK3-205ENST00000557253 LBHD1Q9BQE6 289 aaPredicted RBP11.93□□□□□ -0.5
RIPK3-205ENST00000557253 PAGR1Q9BTK6 254 aa11.93□□□□□ -0.5
RIPK3-205ENST00000557253 TBC1D2Q9BYX2 928 aa11.93□□□□□ -0.5
RIPK3-205ENST00000557253 PORCNQ9H237 461 aa11.93□□□□□ -0.5
RIPK3-205ENST00000557253 TMOD4Q9NZQ9 345 aa11.93□□□□□ -0.5
RIPK3-205ENST00000557253 RBPJLQ9UBG7 517 aa11.93□□□□□ -0.5
RIPK3-205ENST00000557253 FBXO3Q9UK99 471 aa11.93□□□□□ -0.5
RIPK3-205ENST00000557253 CUL9Q8IWT3 2517 aa11.93□□□□□ -0.5
RIPK3-205ENST00000557253 COL2A1P02458 1487 aaPredicted RBP11.92□□□□□ -0.5
RIPK3-205ENST00000557253 CENPBP07199 599 aaPredicted RBP11.92□□□□□ -0.5
RIPK3-205ENST00000557253 XRCC5P13010 732 aaKnown RBP11.92□□□□□ -0.5
RIPK3-205ENST00000557253 ATN1P54259 1190 aaPredicted RBP11.92□□□□□ -0.5
RIPK3-205ENST00000557253 BACE1P56817 501 aa11.92□□□□□ -0.5
RIPK3-205ENST00000557253 ZNF697Q5TEC3 545 aa11.92□□□□□ -0.5
RIPK3-205ENST00000557253 PI16Q6UXB8 463 aa11.92□□□□□ -0.5
RIPK3-205ENST00000557253 GPR142Q7Z601 462 aa11.92□□□□□ -0.5
RIPK3-205ENST00000557253 CCAR1Q8IX12 1150 aaKnown RBP11.92□□□□□ -0.5
RIPK3-205ENST00000557253 FAM9BQ8IZU0 186 aa11.92□□□□□ -0.5
RIPK3-205ENST00000557253 SOCS4Q8WXH5 440 aa11.92□□□□□ -0.5
RIPK3-205ENST00000557253 USP6NLQ92738 828 aa11.92□□□□□ -0.5
RIPK3-205ENST00000557253 XAGE2Q96GT9 111 aa11.92□□□□□ -0.5
RIPK3-205ENST00000557253 NDUFB9Q9Y6M9 179 aa11.92□□□□□ -0.5
RIPK3-205ENST00000557253 FRMPD3Q5JV73 1810 aa11.91□□□□□ -0.5
RIPK3-205ENST00000557253 A0A1B0GUL7 405 aa11.91□□□□□ -0.5
RIPK3-205ENST00000557253 NPM3O75607 178 aaKnown RBP11.91□□□□□ -0.5
RIPK3-205ENST00000557253 UBTFL1P0CB47 393 aaPredicted RBP11.91□□□□□ -0.5
RIPK3-205ENST00000557253 MAPK4P31152 587 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms