RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 MIGA2Q7L4E1 593 aa20.91■□□□□ 0.94
PSEN1-218ENST00000556864 ANKRD13AQ8IZ07 590 aa20.91■□□□□ 0.94
PSEN1-218ENST00000556864 IFNL3Q8IZI9 196 aa20.91■□□□□ 0.94
PSEN1-218ENST00000556864 HHIPL1Q96JK4 782 aa20.91■□□□□ 0.94
PSEN1-218ENST00000556864 ROBO3Q96MS0 1386 aa20.91■□□□□ 0.94
PSEN1-218ENST00000556864 WRNIP1Q96S55 665 aa20.91■□□□□ 0.94
PSEN1-218ENST00000556864 OTOFQ9HC10 1997 aa20.91■□□□□ 0.94
PSEN1-218ENST00000556864 CSADQ9Y600 493 aa20.91■□□□□ 0.94
PSEN1-218ENST00000556864 USP17L12C9JPN9 530 aa20.9■□□□□ 0.94
PSEN1-218ENST00000556864 USP17L21D6R901 530 aa20.9■□□□□ 0.94
PSEN1-218ENST00000556864 SGSM2O43147 1006 aa20.9■□□□□ 0.94
PSEN1-218ENST00000556864 SAPCD2Q86UD0 394 aa20.9■□□□□ 0.94
PSEN1-218ENST00000556864 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.9■□□□□ 0.94
PSEN1-218ENST00000556864 ESYT1Q9BSJ8 1104 aa20.9■□□□□ 0.94
PSEN1-218ENST00000556864 DSCC1Q9BVC3 393 aa20.9■□□□□ 0.94
PSEN1-218ENST00000556864 UBE2Q2LH0YL09 131 aa20.89■□□□□ 0.93
PSEN1-218ENST00000556864 USP2O75604 605 aaPredicted RBP20.89■□□□□ 0.93
PSEN1-218ENST00000556864 SLC3A2P08195 630 aaKnown RBP20.89■□□□□ 0.93
PSEN1-218ENST00000556864 HSPD1P10809 573 aaKnown RBP20.89■□□□□ 0.93
PSEN1-218ENST00000556864 MAP3K10Q02779 954 aa20.89■□□□□ 0.93
PSEN1-218ENST00000556864 ALX1Q15699 326 aa20.89■□□□□ 0.93
PSEN1-218ENST00000556864 C12orf60Q5U649 245 aa20.89■□□□□ 0.93
PSEN1-218ENST00000556864 VPS53Q5VIR6 699 aa20.89■□□□□ 0.93
PSEN1-218ENST00000556864 CTR9Q6PD62 1173 aa20.89■□□□□ 0.93
PSEN1-218ENST00000556864 METTL16Q86W50 562 aaKnown RBP20.89■□□□□ 0.93
PSEN1-218ENST00000556864 KLRG1Q96E93 195 aa20.89■□□□□ 0.93
PSEN1-218ENST00000556864 SWAP70Q9UH65 585 aa20.89■□□□□ 0.93
PSEN1-218ENST00000556864 FOXP2O15409 715 aa20.88■□□□□ 0.93
PSEN1-218ENST00000556864 CYP2D6P10635 497 aa20.88■□□□□ 0.93
PSEN1-218ENST00000556864 MAP3K9P80192 1104 aa20.88■□□□□ 0.93
PSEN1-218ENST00000556864 LDLRAD1Q5T700 205 aa20.88■□□□□ 0.93
PSEN1-218ENST00000556864 KIAA1211Q6ZU35 1233 aa20.88■□□□□ 0.93
PSEN1-218ENST00000556864 MOB2Q70IA6 237 aa20.88■□□□□ 0.93
PSEN1-218ENST00000556864 ZNF112Q9UJU3 913 aa20.88■□□□□ 0.93
PSEN1-218ENST00000556864 BAZ2AQ9UIF9 1905 aaKnown RBP20.88■□□□□ 0.93
PSEN1-218ENST00000556864 RASSF10A6NK89 507 aa20.87■□□□□ 0.93
PSEN1-218ENST00000556864 FAM196BA6NMK8 535 aa20.87■□□□□ 0.93
PSEN1-218ENST00000556864 MINDY4BA8MYZ0 360 aa20.87■□□□□ 0.93
PSEN1-218ENST00000556864 PLCD1P51178 756 aa20.87■□□□□ 0.93
PSEN1-218ENST00000556864 NOL9Q5SY16 702 aaKnown RBP20.87■□□□□ 0.93
PSEN1-218ENST00000556864 PAXIP1Q6ZW49 1069 aaPredicted RBP20.87■□□□□ 0.93
PSEN1-218ENST00000556864 ZNF287Q9HBT7 754 aa20.87■□□□□ 0.93
PSEN1-218ENST00000556864 CTNNA3Q9UI47 895 aa20.87■□□□□ 0.93
PSEN1-218ENST00000556864 FZD1Q9UP38 647 aa20.87■□□□□ 0.93
PSEN1-218ENST00000556864 DOCK1Q14185 1865 aa20.87■□□□□ 0.93
PSEN1-218ENST00000556864 PPARAQ07869 468 aa20.86■□□□□ 0.93
PSEN1-218ENST00000556864 VGLL4Q14135 290 aa20.86■□□□□ 0.93
PSEN1-218ENST00000556864 RGMBQ6NW40 437 aa20.86■□□□□ 0.93
PSEN1-218ENST00000556864 IL25Q9H293 177 aa20.86■□□□□ 0.93
PSEN1-218ENST00000556864 DNAJC18Q9H819 358 aa20.86■□□□□ 0.93
PSEN1-218ENST00000556864 LAMA4Q16363 1823 aa20.85■□□□□ 0.93
PSEN1-218ENST00000556864 CYP2D7A0A087X1C5 515 aa20.85■□□□□ 0.93
PSEN1-218ENST00000556864 ECE1P42892 770 aa20.85■□□□□ 0.93
PSEN1-218ENST00000556864 GABPAQ06546 454 aa20.85■□□□□ 0.93
PSEN1-218ENST00000556864 DEFB115Q30KQ5 88 aa20.85■□□□□ 0.93
PSEN1-218ENST00000556864 C16orf86Q6ZW13 317 aa20.85■□□□□ 0.93
PSEN1-218ENST00000556864 SCYL3Q8IZE3 742 aa20.85■□□□□ 0.93
PSEN1-218ENST00000556864 PICK1Q9NRD5 415 aa20.85■□□□□ 0.93
PSEN1-218ENST00000556864 GINM1Q9NU53 330 aa20.85■□□□□ 0.93
PSEN1-218ENST00000556864 U3KPZ7 1027 aaPredicted RBP20.85■□□□□ 0.93
PSEN1-218ENST00000556864 PHF20L1A8MW92 1017 aa20.84■□□□□ 0.93
PSEN1-218ENST00000556864 CTNND1O60716 968 aaKnown RBP20.84■□□□□ 0.93
PSEN1-218ENST00000556864 INPP5BP32019 993 aa20.84■□□□□ 0.93
PSEN1-218ENST00000556864 ZNF157P51786 506 aaPredicted RBP20.84■□□□□ 0.93
PSEN1-218ENST00000556864 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.84■□□□□ 0.93
PSEN1-218ENST00000556864 CCDC102AQ96A19 550 aa20.84■□□□□ 0.93
PSEN1-218ENST00000556864 SNCAIPQ9Y6H5 919 aa20.84■□□□□ 0.93
PSEN1-218ENST00000556864 EIF5BO60841 1220 aaKnown RBP20.83■□□□□ 0.93
PSEN1-218ENST00000556864 FGAP02671 866 aa20.83■□□□□ 0.93
PSEN1-218ENST00000556864 PDE4BQ07343 736 aa20.83■□□□□ 0.93
PSEN1-218ENST00000556864 IMMTQ16891 758 aaKnown RBP20.83■□□□□ 0.93
PSEN1-218ENST00000556864 TATDN1Q6P1N9 297 aa20.83■□□□□ 0.93
PSEN1-218ENST00000556864 ZKSCAN4Q969J2 545 aaPredicted RBP20.83■□□□□ 0.93
PSEN1-218ENST00000556864 SLC10A4Q96EP9 437 aa20.83■□□□□ 0.93
PSEN1-218ENST00000556864 DYNLL2Q96FJ2 89 aa20.83■□□□□ 0.93
PSEN1-218ENST00000556864 ELP3Q9H9T3 547 aa20.83■□□□□ 0.93
PSEN1-218ENST00000556864 ANO2Q9NQ90 1003 aa20.83■□□□□ 0.93
PSEN1-218ENST00000556864 ANAPC4Q9UJX5 808 aa20.83■□□□□ 0.93
PSEN1-218ENST00000556864 SPDYE5A6NIY4 337 aa20.82■□□□□ 0.92
PSEN1-218ENST00000556864 SLC10A3P09131 477 aa20.82■□□□□ 0.92
PSEN1-218ENST00000556864 SHMT1P34896 483 aa20.82■□□□□ 0.92
PSEN1-218ENST00000556864 CAP2P40123 477 aa20.82■□□□□ 0.92
PSEN1-218ENST00000556864 CERKLQ49MI3 558 aaPredicted RBP20.82■□□□□ 0.92
PSEN1-218ENST00000556864 RASAL3Q86YV0 1011 aa20.82■□□□□ 0.92
PSEN1-218ENST00000556864 CLMNQ96JQ2 1002 aa20.82■□□□□ 0.92
PSEN1-218ENST00000556864 THSD7BQ9C0I4 1608 aa20.82■□□□□ 0.92
PSEN1-218ENST00000556864 ZNF213O14771 459 aa20.81■□□□□ 0.92
PSEN1-218ENST00000556864 REC8O95072 547 aa20.81■□□□□ 0.92
PSEN1-218ENST00000556864 ASNSP08243 561 aa20.81■□□□□ 0.92
PSEN1-218ENST00000556864 SLURP2P0DP57 97 aa20.81■□□□□ 0.92
PSEN1-218ENST00000556864 PCP11498 1178 aaKnown RBP20.81■□□□□ 0.92
PSEN1-218ENST00000556864 CDK8P49336 464 aa20.81■□□□□ 0.92
PSEN1-218ENST00000556864 HTRA3P83110 453 aa20.81■□□□□ 0.92
PSEN1-218ENST00000556864 ERO1BQ86YB8 467 aa20.81■□□□□ 0.92
PSEN1-218ENST00000556864 SLC44A5Q8NCS7 719 aa20.81■□□□□ 0.92
PSEN1-218ENST00000556864 CAPNS2Q96L46 248 aa20.81■□□□□ 0.92
PSEN1-218ENST00000556864 CCDC17Q96LX7 622 aa20.81■□□□□ 0.92
PSEN1-218ENST00000556864 TBC1D2Q9BYX2 928 aa20.81■□□□□ 0.92
PSEN1-218ENST00000556864 RNF41Q9H4P4 317 aaPredicted RBP20.81■□□□□ 0.92
PSEN1-218ENST00000556864 MKNK2Q9HBH9 465 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms