RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 COL2A1P02458 1487 aaPredicted RBP13.12□□□□□ -0.31
XRCC3-216ENST00000556682 AK9Q5TCS8 1911 aa13.12□□□□□ -0.31
XRCC3-216ENST00000556682 PDHXO00330 501 aa13.12□□□□□ -0.31
XRCC3-216ENST00000556682 HLA-DOAP06340 250 aa13.12□□□□□ -0.31
XRCC3-216ENST00000556682 ADGRA1Q86SQ6 560 aa13.12□□□□□ -0.31
XRCC3-216ENST00000556682 CRACR2BQ8N4Y2 399 aaPredicted RBP13.12□□□□□ -0.31
XRCC3-216ENST00000556682 AFG3L2Q9Y4W6 797 aa13.12□□□□□ -0.31
XRCC3-216ENST00000556682 OTOFQ9HC10 1997 aa13.12□□□□□ -0.31
XRCC3-216ENST00000556682 A0A0G2JLL6 359 aaPredicted RBP13.11□□□□□ -0.31
XRCC3-216ENST00000556682 GNRH1P01148 92 aa13.11□□□□□ -0.31
XRCC3-216ENST00000556682 USP5P45974 858 aa13.11□□□□□ -0.31
XRCC3-216ENST00000556682 PRRT2Q7Z6L0 340 aaPredicted RBP13.11□□□□□ -0.31
XRCC3-216ENST00000556682 MAPKAPK5Q8IW41 473 aa13.11□□□□□ -0.31
XRCC3-216ENST00000556682 PARK7Q99497 189 aaKnown RBP13.11□□□□□ -0.31
XRCC3-216ENST00000556682 LRRCC1Q9C099 1032 aa13.11□□□□□ -0.31
XRCC3-216ENST00000556682 ANTXR1Q9H6X2 564 aa13.11□□□□□ -0.31
XRCC3-216ENST00000556682 PTPN22Q9Y2R2 807 aa13.11□□□□□ -0.31
XRCC3-216ENST00000556682 NDUFB9Q9Y6M9 179 aa13.11□□□□□ -0.31
XRCC3-216ENST00000556682 FLT1P17948 1338 aa13.11□□□□□ -0.31
XRCC3-216ENST00000556682 CAP2P40123 477 aa13.1□□□□□ -0.31
XRCC3-216ENST00000556682 SLC9C2Q5TAH2 1124 aa13.1□□□□□ -0.31
XRCC3-216ENST00000556682 MIGA1Q8NAN2 632 aa13.1□□□□□ -0.31
XRCC3-216ENST00000556682 DNAJC2Q99543 621 aaKnown RBP13.1□□□□□ -0.31
XRCC3-216ENST00000556682 AS3MTQ9HBK9 375 aa13.1□□□□□ -0.31
XRCC3-216ENST00000556682 TRIM75PA6NK02 468 aa13.09□□□□□ -0.31
XRCC3-216ENST00000556682 FAM196BA6NMK8 535 aa13.09□□□□□ -0.31
XRCC3-216ENST00000556682 GOLIM4O00461 696 aa13.09□□□□□ -0.31
XRCC3-216ENST00000556682 ASNSP08243 561 aa13.09□□□□□ -0.31
XRCC3-216ENST00000556682 SLURP2P0DP57 97 aa13.09□□□□□ -0.31
XRCC3-216ENST00000556682 SOX10P56693 466 aa13.09□□□□□ -0.31
XRCC3-216ENST00000556682 DYNLL1P63167 89 aaKnown RBP13.09□□□□□ -0.31
XRCC3-216ENST00000556682 C17orf99Q6UX52 265 aa13.09□□□□□ -0.31
XRCC3-216ENST00000556682 GADL1Q6ZQY3 521 aa13.09□□□□□ -0.31
XRCC3-216ENST00000556682 ZNF280CQ8ND82 737 aa13.09□□□□□ -0.31
XRCC3-216ENST00000556682 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.09□□□□□ -0.31
XRCC3-216ENST00000556682 GINM1Q9NU53 330 aa13.09□□□□□ -0.31
XRCC3-216ENST00000556682 PALD1Q9ULE6 856 aa13.09□□□□□ -0.31
XRCC3-216ENST00000556682 SLC45A1Q9Y2W3 748 aa13.09□□□□□ -0.31
XRCC3-216ENST00000556682 LAMB1P07942 1786 aa13.08□□□□□ -0.32
XRCC3-216ENST00000556682 MAGEB6P1A0A0J9YX57 407 aa13.08□□□□□ -0.32
XRCC3-216ENST00000556682 USP17L5A8MUK1 530 aa13.08□□□□□ -0.32
XRCC3-216ENST00000556682 ATP5JP18859 108 aa13.08□□□□□ -0.32
XRCC3-216ENST00000556682 HOXD10P28358 340 aa13.08□□□□□ -0.32
XRCC3-216ENST00000556682 PRMT2P55345 433 aa13.08□□□□□ -0.32
XRCC3-216ENST00000556682 LACTBP83111 547 aaPredicted RBP13.08□□□□□ -0.32
XRCC3-216ENST00000556682 SPP2Q13103 211 aa13.08□□□□□ -0.32
XRCC3-216ENST00000556682 PABPC4Q13310 644 aaKnown RBP eCLIP13.08□□□□□ -0.323e-7■■■■■ 28.7
XRCC3-216ENST00000556682 MOGSQ13724 837 aa13.08□□□□□ -0.32
XRCC3-216ENST00000556682 GPAT2Q6NUI2 795 aa13.08□□□□□ -0.32
XRCC3-216ENST00000556682 NBPF11Q86T75 865 aa13.08□□□□□ -0.32
XRCC3-216ENST00000556682 TTC6Q86TZ1 520 aa13.08□□□□□ -0.32
XRCC3-216ENST00000556682 METTL16Q86W50 562 aaKnown RBP13.08□□□□□ -0.32
XRCC3-216ENST00000556682 BOLA2Q9H3K6 86 aa13.08□□□□□ -0.32
XRCC3-216ENST00000556682 PAG1Q9NWQ8 432 aa13.08□□□□□ -0.32
XRCC3-216ENST00000556682 CPA4Q9UI42 421 aa13.08□□□□□ -0.32
XRCC3-216ENST00000556682 PDE6AP16499 860 aa13.07□□□□□ -0.32
XRCC3-216ENST00000556682 PROCA1Q8NCQ7 364 aaPredicted RBP13.07□□□□□ -0.32
XRCC3-216ENST00000556682 SMCR8Q8TEV9 937 aaPredicted RBP13.07□□□□□ -0.32
XRCC3-216ENST00000556682 GPATCH3Q96I76 525 aa13.07□□□□□ -0.32
XRCC3-216ENST00000556682 HAUS7Q99871 368 aa13.07□□□□□ -0.32
XRCC3-216ENST00000556682 CRNKL1Q9BZJ0 848 aaKnown RBP13.07□□□□□ -0.32
XRCC3-216ENST00000556682 DCTPP1Q9H773 170 aa13.07□□□□□ -0.32
XRCC3-216ENST00000556682 SAP30BPQ9UHR5 308 aaKnown RBP13.07□□□□□ -0.32
XRCC3-216ENST00000556682 PNMA3Q9UL41 463 aa13.07□□□□□ -0.32
XRCC3-216ENST00000556682 AGTPBP1Q9UPW5 1226 aa13.07□□□□□ -0.32
XRCC3-216ENST00000556682 FMNL1O95466 1100 aaPredicted RBP13.06□□□□□ -0.32
XRCC3-216ENST00000556682 POLR3DP05423 398 aaPredicted RBP13.06□□□□□ -0.32
XRCC3-216ENST00000556682 CYP2C8P10632 490 aa13.06□□□□□ -0.32
XRCC3-216ENST00000556682 RRP1P56182 461 aaKnown RBP13.06□□□□□ -0.32
XRCC3-216ENST00000556682 ZSCAN25Q6NSZ9 544 aa13.06□□□□□ -0.32
XRCC3-216ENST00000556682 YTHDC1Q96MU7 727 aaKnown RBP13.06□□□□□ -0.32
XRCC3-216ENST00000556682 RIOK1Q9BRS2 568 aaKnown RBP13.06□□□□□ -0.32
XRCC3-216ENST00000556682 EHD4Q9H223 541 aa13.06□□□□□ -0.32
XRCC3-216ENST00000556682 SERPINB13Q9UIV8 391 aa13.06□□□□□ -0.32
XRCC3-216ENST00000556682 ZNF532Q9HCE3 1301 aa13.06□□□□□ -0.32
XRCC3-216ENST00000556682 DOCK2Q92608 1830 aa13.06□□□□□ -0.32
XRCC3-216ENST00000556682 OSBPP22059 807 aa13.05□□□□□ -0.32
XRCC3-216ENST00000556682 PSMC4P43686 418 aa13.05□□□□□ -0.32
XRCC3-216ENST00000556682 C1QBPQ07021 282 aaKnown RBP13.05□□□□□ -0.32
XRCC3-216ENST00000556682 SLC9C1Q4G0N8 1177 aa13.05□□□□□ -0.32
XRCC3-216ENST00000556682 CCDC84Q86UT8 332 aaPredicted RBP13.05□□□□□ -0.32
XRCC3-216ENST00000556682 ARMC5Q96C12 935 aa13.05□□□□□ -0.32
XRCC3-216ENST00000556682 WDR18Q9BV38 432 aa13.05□□□□□ -0.32
XRCC3-216ENST00000556682 ECHDC1Q9NTX5 307 aa13.05□□□□□ -0.32
XRCC3-216ENST00000556682 TMOD4Q9NZQ9 345 aa13.05□□□□□ -0.32
XRCC3-216ENST00000556682 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.05□□□□□ -0.32
XRCC3-216ENST00000556682 MAST2Q6P0Q8 1798 aa13.04□□□□□ -0.32
XRCC3-216ENST00000556682 C19orf81C9J6K1 198 aa13.04□□□□□ -0.32
XRCC3-216ENST00000556682 SMARCA5O60264 1052 aaPredicted RBP13.04□□□□□ -0.32
XRCC3-216ENST00000556682 BCRP11274 1271 aa13.04□□□□□ -0.32
XRCC3-216ENST00000556682 HMGCS2P54868 508 aa13.04□□□□□ -0.32
XRCC3-216ENST00000556682 FCGRTP55899 365 aa13.04□□□□□ -0.32
XRCC3-216ENST00000556682 RRP1BQ14684 758 aaKnown RBP13.04□□□□□ -0.32
XRCC3-216ENST00000556682 SLC4A8Q2Y0W8 1093 aa13.04□□□□□ -0.32
XRCC3-216ENST00000556682 SH3D19Q5HYK7 790 aa13.04□□□□□ -0.32
XRCC3-216ENST00000556682 DDRGK1Q96HY6 314 aa13.04□□□□□ -0.32
XRCC3-216ENST00000556682 TMEM106CQ9BVX2 250 aa13.04□□□□□ -0.32
XRCC3-216ENST00000556682 ARHGAP39Q9C0H5 1083 aa13.04□□□□□ -0.32
XRCC3-216ENST00000556682 DNAJC18Q9H819 358 aa13.04□□□□□ -0.32
XRCC3-216ENST00000556682 CABP5Q9NP86 173 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms