RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 SH3RF3Q8TEJ3 882 aaPredicted RBP15.37■□□□□ 0.05
SNX6-207ENST00000556303 GINM1Q9NU53 330 aa15.37■□□□□ 0.05
SNX6-207ENST00000556303 KIAA0100Q14667 2235 aaKnown RBP15.36■□□□□ 0.05
SNX6-207ENST00000556303 PRMT2P55345 433 aa15.36■□□□□ 0.05
SNX6-207ENST00000556303 PARK7Q99497 189 aaKnown RBP15.36■□□□□ 0.05
SNX6-207ENST00000556303 PIH1D3Q9NQM4 214 aaKnown RBP15.36■□□□□ 0.05
SNX6-207ENST00000556303 MAST2Q6P0Q8 1798 aa15.35■□□□□ 0.05
SNX6-207ENST00000556303 IDH1O75874 414 aaKnown RBP15.35■□□□□ 0.05
SNX6-207ENST00000556303 IFIT2P09913 472 aaKnown RBP15.35■□□□□ 0.05
SNX6-207ENST00000556303 LACTBP83111 547 aaPredicted RBP15.35■□□□□ 0.05
SNX6-207ENST00000556303 TGFBRAP1Q8WUH2 860 aa15.35■□□□□ 0.05
SNX6-207ENST00000556303 ARMC5Q96C12 935 aa15.35■□□□□ 0.05
SNX6-207ENST00000556303 IL1RAPL2Q9NP60 686 aa15.35■□□□□ 0.05
SNX6-207ENST00000556303 BRCA2P51587 3418 aa15.34■□□□□ 0.05
SNX6-207ENST00000556303 CYP7A1P22680 504 aa15.34■□□□□ 0.05
SNX6-207ENST00000556303 CAP2P40123 477 aa15.34■□□□□ 0.05
SNX6-207ENST00000556303 GPAT2Q6NUI2 795 aa15.34■□□□□ 0.05
SNX6-207ENST00000556303 ADGRA1Q86SQ6 560 aa15.34■□□□□ 0.05
SNX6-207ENST00000556303 NBPF11Q86T75 865 aa15.34■□□□□ 0.05
SNX6-207ENST00000556303 MKI67P46013 3256 aaKnown RBP15.34■□□□□ 0.05
SNX6-207ENST00000556303 FLT1P17948 1338 aa15.34■□□□□ 0.05
SNX6-207ENST00000556303 HLA-DOAP06340 250 aa15.33■□□□□ 0.04
SNX6-207ENST00000556303 HOXD10P28358 340 aa15.33■□□□□ 0.04
SNX6-207ENST00000556303 SOX10P56693 466 aa15.33■□□□□ 0.04
SNX6-207ENST00000556303 MAGEB6Q8N7X4 407 aa15.33■□□□□ 0.04
SNX6-207ENST00000556303 PROCA1Q8NCQ7 364 aaPredicted RBP15.33■□□□□ 0.04
SNX6-207ENST00000556303 ADGRA2Q96PE1 1338 aa15.33■□□□□ 0.04
SNX6-207ENST00000556303 DOCK1Q14185 1865 aa15.32■□□□□ 0.04
SNX6-207ENST00000556303 USP17L5A8MUK1 530 aa15.32■□□□□ 0.04
SNX6-207ENST00000556303 ASNSP08243 561 aa15.32■□□□□ 0.04
SNX6-207ENST00000556303 MAPKAPK5Q8IW41 473 aa15.32■□□□□ 0.04
SNX6-207ENST00000556303 ZNF280CQ8ND82 737 aa15.32■□□□□ 0.04
SNX6-207ENST00000556303 WDR18Q9BV38 432 aa15.32■□□□□ 0.04
SNX6-207ENST00000556303 AS3MTQ9HBK9 375 aa15.32■□□□□ 0.04
SNX6-207ENST00000556303 PNMA3Q9UL41 463 aa15.32■□□□□ 0.04
SNX6-207ENST00000556303 AGTPBP1Q9UPW5 1226 aa15.32■□□□□ 0.04
SNX6-207ENST00000556303 TRIM75PA6NK02 468 aa15.31■□□□□ 0.04
SNX6-207ENST00000556303 BCRP11274 1271 aa15.31■□□□□ 0.04
SNX6-207ENST00000556303 CAP1Q01518 475 aa15.31■□□□□ 0.04
SNX6-207ENST00000556303 PABPC4Q13310 644 aaKnown RBP eCLIP15.31■□□□□ 0.04
SNX6-207ENST00000556303 SH3D19Q5HYK7 790 aa15.31■□□□□ 0.04
SNX6-207ENST00000556303 CRACR2BQ8N4Y2 399 aaPredicted RBP15.31■□□□□ 0.04
SNX6-207ENST00000556303 TRIM34Q9BYJ4 488 aa15.31■□□□□ 0.04
SNX6-207ENST00000556303 ANTXR1Q9H6X2 564 aa15.31■□□□□ 0.04
SNX6-207ENST00000556303 TAOK2Q9UL54 1235 aa15.31■□□□□ 0.04
SNX6-207ENST00000556303 MYO5AQ9Y4I1 1855 aaKnown RBP15.31■□□□□ 0.04
SNX6-207ENST00000556303 SLURP2P0DP57 97 aa15.3■□□□□ 0.04
SNX6-207ENST00000556303 ATP5JP18859 108 aa15.3■□□□□ 0.04
SNX6-207ENST00000556303 PSMC4P43686 418 aa15.3■□□□□ 0.04
SNX6-207ENST00000556303 USP5P45974 858 aa15.3■□□□□ 0.04
SNX6-207ENST00000556303 DYNLL1P63167 89 aaKnown RBP15.3■□□□□ 0.04
SNX6-207ENST00000556303 SLC9C2Q5TAH2 1124 aa15.3■□□□□ 0.04
SNX6-207ENST00000556303 C20orf194Q5TEA3 1177 aa15.3■□□□□ 0.04
SNX6-207ENST00000556303 FOCADQ5VW36 1801 aa15.3■□□□□ 0.04
SNX6-207ENST00000556303 GADL1Q6ZQY3 521 aa15.3■□□□□ 0.04
SNX6-207ENST00000556303 TTC6Q86TZ1 520 aa15.3■□□□□ 0.04
SNX6-207ENST00000556303 PHIPQ8WWQ0 1821 aa15.3■□□□□ 0.04
SNX6-207ENST00000556303 LRRCC1Q9C099 1032 aa15.3■□□□□ 0.04
SNX6-207ENST00000556303 EHD4Q9H223 541 aa15.3■□□□□ 0.04
SNX6-207ENST00000556303 CPA4Q9UI42 421 aa15.3■□□□□ 0.04
SNX6-207ENST00000556303 PALD1Q9ULE6 856 aa15.3■□□□□ 0.04
SNX6-207ENST00000556303 PTPRFP10586 1907 aa15.29■□□□□ 0.04
SNX6-207ENST00000556303 FAM196BA6NMK8 535 aa15.29■□□□□ 0.04
SNX6-207ENST00000556303 APBB1O00213 710 aa15.29■□□□□ 0.04
SNX6-207ENST00000556303 SPP2Q13103 211 aa15.29■□□□□ 0.04
SNX6-207ENST00000556303 SLC9C1Q4G0N8 1177 aa15.29■□□□□ 0.04
SNX6-207ENST00000556303 ZNF333Q96JL9 665 aa15.29■□□□□ 0.04
SNX6-207ENST00000556303 RIOK1Q9BRS2 568 aaKnown RBP15.29■□□□□ 0.04
SNX6-207ENST00000556303 SRRDQ9UH36 339 aa15.29■□□□□ 0.04
SNX6-207ENST00000556303 MAGEB6P1A0A0J9YX57 407 aa15.28■□□□□ 0.04
SNX6-207ENST00000556303 C19orf81C9J6K1 198 aa15.28■□□□□ 0.04
SNX6-207ENST00000556303 CYP2C8P10632 490 aa15.28■□□□□ 0.04
SNX6-207ENST00000556303 PDE6AP16499 860 aa15.28■□□□□ 0.04
SNX6-207ENST00000556303 FCGRTP55899 365 aa15.28■□□□□ 0.04
SNX6-207ENST00000556303 TATDN1Q6P1N9 297 aa15.28■□□□□ 0.04
SNX6-207ENST00000556303 MIGA1Q8NAN2 632 aa15.28■□□□□ 0.04
SNX6-207ENST00000556303 HAUS7Q99871 368 aa15.28■□□□□ 0.04
SNX6-207ENST00000556303 TMEM106CQ9BVX2 250 aa15.28■□□□□ 0.04
SNX6-207ENST00000556303 ARHGAP39Q9C0H5 1083 aa15.28■□□□□ 0.04
SNX6-207ENST00000556303 DNAJC18Q9H819 358 aa15.28■□□□□ 0.04
SNX6-207ENST00000556303 SERPINB13Q9UIV8 391 aa15.28■□□□□ 0.04
SNX6-207ENST00000556303 PTCH2Q9Y6C5 1203 aa15.28■□□□□ 0.04
SNX6-207ENST00000556303 NDUFB9Q9Y6M9 179 aa15.28■□□□□ 0.04
SNX6-207ENST00000556303 CDK5RAP2Q96SN8 1893 aa15.27■□□□□ 0.04
SNX6-207ENST00000556303 GOLIM4O00461 696 aa15.27■□□□□ 0.04
SNX6-207ENST00000556303 FMNL1O95466 1100 aaPredicted RBP15.27■□□□□ 0.04
SNX6-207ENST00000556303 OSBPP22059 807 aa15.27■□□□□ 0.04
SNX6-207ENST00000556303 GCLCP48506 637 aaPredicted RBP15.27■□□□□ 0.04
SNX6-207ENST00000556303 BACE1P56817 501 aa15.27■□□□□ 0.04
SNX6-207ENST00000556303 RRP1BQ14684 758 aaKnown RBP15.27■□□□□ 0.04
SNX6-207ENST00000556303 SMCR8Q8TEV9 937 aaPredicted RBP15.27■□□□□ 0.04
SNX6-207ENST00000556303 TRIM47Q96LD4 638 aa15.27■□□□□ 0.04
SNX6-207ENST00000556303 CRNKL1Q9BZJ0 848 aaKnown RBP15.27■□□□□ 0.04
SNX6-207ENST00000556303 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.27■□□□□ 0.04
SNX6-207ENST00000556303 DCTPP1Q9H773 170 aa15.27■□□□□ 0.04
SNX6-207ENST00000556303 PAG1Q9NWQ8 432 aa15.27■□□□□ 0.04
SNX6-207ENST00000556303 TCRBV5S4A2TA0A5A2 114 aa15.26■□□□□ 0.03
SNX6-207ENST00000556303 HOXA7P31268 230 aaPredicted RBP15.26■□□□□ 0.03
SNX6-207ENST00000556303 FAM110CQ1W6H9 321 aa15.26■□□□□ 0.03
SNX6-207ENST00000556303 DNAJC2Q99543 621 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms