RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 EYSQ5T1H1 3165 aa13.22□□□□□ -0.29
SRP54-205ENST00000554803 LAMA2P24043 3122 aaKnown RBP13.22□□□□□ -0.29
SRP54-205ENST00000554803 F8W031 263 aaPredicted RBP13.21□□□□□ -0.29
SRP54-205ENST00000554803 BRD1O95696 1058 aa13.21□□□□□ -0.29
SRP54-205ENST00000554803 BCAMP50895 628 aa13.21□□□□□ -0.29
SRP54-205ENST00000554803 FKBP1AP62942 108 aaKnown RBP13.21□□□□□ -0.29
SRP54-205ENST00000554803 SLAIN1Q8ND83 568 aa13.21□□□□□ -0.29
SRP54-205ENST00000554803 SSH3Q8TE77 659 aa13.21□□□□□ -0.29
SRP54-205ENST00000554803 UNC93B1Q9H1C4 597 aa13.21□□□□□ -0.29
SRP54-205ENST00000554803 GREM2Q9H772 168 aa13.21□□□□□ -0.29
SRP54-205ENST00000554803 PRUNE2Q8WUY3 3088 aa13.2□□□□□ -0.3
SRP54-205ENST00000554803 ZNF500O60304 480 aaPredicted RBP13.2□□□□□ -0.3
SRP54-205ENST00000554803 FMNL1O95466 1100 aaPredicted RBP13.2□□□□□ -0.3
SRP54-205ENST00000554803 CHMLP26374 656 aa13.2□□□□□ -0.3
SRP54-205ENST00000554803 SNAPC2Q13487 334 aa13.2□□□□□ -0.3
SRP54-205ENST00000554803 UVSSAQ2YD98 709 aa13.2□□□□□ -0.3
SRP54-205ENST00000554803 CDAN1Q8IWY9 1227 aa13.2□□□□□ -0.3
SRP54-205ENST00000554803 TMEM87AQ8NBN3 555 aa13.2□□□□□ -0.3
SRP54-205ENST00000554803 TMX3Q96JJ7 454 aa13.2□□□□□ -0.3
SRP54-205ENST00000554803 MAP7D2Q96T17 732 aa13.2□□□□□ -0.3
SRP54-205ENST00000554803 ANKRD2Q9GZV1 360 aa13.2□□□□□ -0.3
SRP54-205ENST00000554803 CCDC39Q9UFE4 941 aa13.2□□□□□ -0.3
SRP54-205ENST00000554803 CPA4Q9UI42 421 aa13.2□□□□□ -0.3
SRP54-205ENST00000554803 NOL7Q9UMY1 257 aaKnown RBP13.2□□□□□ -0.3
SRP54-205ENST00000554803 TTC41PQ6P2S7 1318 aa13.19□□□□□ -0.3
SRP54-205ENST00000554803 ADGRA2Q96PE1 1338 aa13.19□□□□□ -0.3
SRP54-205ENST00000554803 IRS2Q9Y4H2 1338 aa13.19□□□□□ -0.3
SRP54-205ENST00000554803 NCOR1O75376 2440 aa13.19□□□□□ -0.3
SRP54-205ENST00000554803 OFD1O75665 1012 aa13.19□□□□□ -0.3
SRP54-205ENST00000554803 IGHMBP2P38935 993 aaKnown RBP13.19□□□□□ -0.3
SRP54-205ENST00000554803 NEK4P51957 841 aa13.19□□□□□ -0.3
SRP54-205ENST00000554803 MTX1Q13505 466 aa13.19□□□□□ -0.3
SRP54-205ENST00000554803 POLA2Q14181 598 aa13.19□□□□□ -0.3
SRP54-205ENST00000554803 RABL6Q3YEC7 729 aaPredicted RBP13.19□□□□□ -0.3
SRP54-205ENST00000554803 SPDYE2Q495Y8 402 aa13.19□□□□□ -0.3
SRP54-205ENST00000554803 LMBR1LQ6UX01 489 aa13.19□□□□□ -0.3
SRP54-205ENST00000554803 ERO1BQ86YB8 467 aa13.19□□□□□ -0.3
SRP54-205ENST00000554803 TDHQ8IZJ6 230 aa13.19□□□□□ -0.3
SRP54-205ENST00000554803 ZNF70Q9UC06 446 aaPredicted RBP13.19□□□□□ -0.3
SRP54-205ENST00000554803 SNCAIPQ9Y6H5 919 aa13.19□□□□□ -0.3
SRP54-205ENST00000554803 MUC3AQ02505 3323 aa13.19□□□□□ -0.3
SRP54-205ENST00000554803 DDX60LQ5H9U9 1706 aaKnown RBP13.19□□□□□ -0.3
SRP54-205ENST00000554803 RPTORQ8N122 1335 aa13.18□□□□□ -0.3
SRP54-205ENST00000554803 IRF6O14896 467 aa13.18□□□□□ -0.3
SRP54-205ENST00000554803 SRGAP3O43295 1099 aa13.18□□□□□ -0.3
SRP54-205ENST00000554803 TFRCP02786 760 aaKnown RBP13.18□□□□□ -0.3
SRP54-205ENST00000554803 RBM5P52756 815 aaKnown RBP eCLIP13.18□□□□□ -0.3
SRP54-205ENST00000554803 PRKCZQ05513 592 aa13.18□□□□□ -0.3
SRP54-205ENST00000554803 CAVIN1Q6NZI2 390 aaKnown RBP13.18□□□□□ -0.3
SRP54-205ENST00000554803 MTERF4Q7Z6M4 381 aaKnown RBP13.18□□□□□ -0.3
SRP54-205ENST00000554803 ERC1Q8IUD2 1116 aa13.18□□□□□ -0.3
SRP54-205ENST00000554803 RUFY2Q8WXA3 655 aa13.18□□□□□ -0.3
SRP54-205ENST00000554803 KIF1BPQ96EK5 621 aa13.18□□□□□ -0.3
SRP54-205ENST00000554803 PLA2G12BQ9BX93 195 aa13.18□□□□□ -0.3
SRP54-205ENST00000554803 AK9Q5TCS8 1911 aa13.17□□□□□ -0.3
SRP54-205ENST00000554803 IL1R1P14778 569 aa13.17□□□□□ -0.3
SRP54-205ENST00000554803 KCNJ4P48050 445 aa13.17□□□□□ -0.3
SRP54-205ENST00000554803 PPIL2Q13356 520 aa13.17□□□□□ -0.3
SRP54-205ENST00000554803 C15orf52Q6ZUT6 534 aaKnown RBP13.17□□□□□ -0.3
SRP54-205ENST00000554803 C7orf61Q8IZ16 206 aa13.17□□□□□ -0.3
SRP54-205ENST00000554803 OTUD7AQ8TE49 926 aaPredicted RBP13.17□□□□□ -0.3
SRP54-205ENST00000554803 GPATCH3Q96I76 525 aa13.17□□□□□ -0.3
SRP54-205ENST00000554803 PAWRQ96IZ0 340 aaKnown RBP13.17□□□□□ -0.3
SRP54-205ENST00000554803 TMEM39BQ9GZU3 492 aa13.17□□□□□ -0.3
SRP54-205ENST00000554803 ZMYND8Q9ULU4 1186 aaPredicted RBP13.17□□□□□ -0.3
SRP54-205ENST00000554803 PA2G4Q9UQ80 394 aaKnown RBP13.17□□□□□ -0.3
SRP54-205ENST00000554803 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.17□□□□□ -0.3
SRP54-205ENST00000554803 RAD50Q92878 1312 aa13.16□□□□□ -0.3
SRP54-205ENST00000554803 PTPRFP10586 1907 aa13.16□□□□□ -0.3
SRP54-205ENST00000554803 HIP1O00291 1037 aa13.16□□□□□ -0.3
SRP54-205ENST00000554803 SMARCA5O60264 1052 aaPredicted RBP13.16□□□□□ -0.3
SRP54-205ENST00000554803 HSPA4P34932 840 aa13.16□□□□□ -0.3
SRP54-205ENST00000554803 RFX5P48382 616 aaPredicted RBP13.16□□□□□ -0.3
SRP54-205ENST00000554803 TNNI2P48788 182 aa13.16□□□□□ -0.3
SRP54-205ENST00000554803 NECAB2Q7Z6G3 386 aa13.16□□□□□ -0.3
SRP54-205ENST00000554803 ANKRD23Q86SG2 305 aa13.16□□□□□ -0.3
SRP54-205ENST00000554803 KLHDC4Q8TBB5 520 aa13.16□□□□□ -0.3
SRP54-205ENST00000554803 GUCD1Q96NT3 240 aa13.16□□□□□ -0.3
SRP54-205ENST00000554803 DEFB118Q96PH6 123 aa13.16□□□□□ -0.3
SRP54-205ENST00000554803 CRISPLD2Q9H0B8 497 aa13.16□□□□□ -0.3
SRP54-205ENST00000554803 TDRD3Q9H7E2 651 aaKnown RBP13.16□□□□□ -0.3
SRP54-205ENST00000554803 PAK6Q9NQU5 681 aaPredicted RBP13.16□□□□□ -0.3
SRP54-205ENST00000554803 FOXD4L1Q9NU39 408 aa13.16□□□□□ -0.3
SRP54-205ENST00000554803 GABRQQ9UN88 632 aa13.16□□□□□ -0.3
SRP54-205ENST00000554803 EXOC6BQ9Y2D4 811 aa13.16□□□□□ -0.3
SRP54-205ENST00000554803 CHMP3Q9Y3E7 222 aa13.16□□□□□ -0.3
SRP54-205ENST00000554803 ADCY3O60266 1144 aa13.15□□□□□ -0.3
SRP54-205ENST00000554803 PRPF40AO75400 957 aaKnown RBP13.15□□□□□ -0.3
SRP54-205ENST00000554803 INHAP05111 366 aa13.15□□□□□ -0.3
SRP54-205ENST00000554803 CSF1RP07333 972 aa13.15□□□□□ -0.3
SRP54-205ENST00000554803 MAGEA10P43363 369 aaPredicted RBP13.15□□□□□ -0.3
SRP54-205ENST00000554803 FCGRTP55899 365 aa13.15□□□□□ -0.3
SRP54-205ENST00000554803 ZSCAN31Q96LW9 406 aaPredicted RBP13.15□□□□□ -0.3
SRP54-205ENST00000554803 TM6SF1Q9BZW5 370 aa13.15□□□□□ -0.3
SRP54-205ENST00000554803 ANO2Q9NQ90 1003 aa13.15□□□□□ -0.3
SRP54-205ENST00000554803 SERPINA10Q9UK55 444 aa13.15□□□□□ -0.3
SRP54-205ENST00000554803 ZDHHC9Q9Y397 364 aa13.15□□□□□ -0.3
SRP54-205ENST00000554803 FAM205AQ6ZU69 1335 aa13.14□□□□□ -0.31
SRP54-205ENST00000554803 TCP10L2B9ZVM9 353 aa13.14□□□□□ -0.31
SRP54-205ENST00000554803 APBB1O00213 710 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms