RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 ZNF157P51786 506 aaPredicted RBP16.56■□□□□ 0.24
TUBB3-202ENST00000553656 MAP3K9P80192 1104 aa16.56■□□□□ 0.24
TUBB3-202ENST00000553656 GRM1Q13255 1194 aa16.56■□□□□ 0.24
TUBB3-202ENST00000553656 CASC1Q6TDU7 716 aa16.56■□□□□ 0.24
TUBB3-202ENST00000553656 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.56■□□□□ 0.24
TUBB3-202ENST00000553656 KLRG1Q96E93 195 aa16.56■□□□□ 0.24
TUBB3-202ENST00000553656 NAPBQ9H115 298 aa16.56■□□□□ 0.24
TUBB3-202ENST00000553656 SERPINB13Q9UIV8 391 aa16.56■□□□□ 0.24
TUBB3-202ENST00000553656 RAD50Q92878 1312 aa16.55■□□□□ 0.24
TUBB3-202ENST00000553656 GSG1L2A8MUP6 293 aa16.55■□□□□ 0.24
TUBB3-202ENST00000553656 LDLRAD1Q5T700 205 aa16.55■□□□□ 0.24
TUBB3-202ENST00000553656 CCDC102AQ96A19 550 aa16.55■□□□□ 0.24
TUBB3-202ENST00000553656 SLC10A4Q96EP9 437 aa16.55■□□□□ 0.24
TUBB3-202ENST00000553656 EHD4Q9H223 541 aa16.55■□□□□ 0.24
TUBB3-202ENST00000553656 DDX60LQ5H9U9 1706 aaKnown RBP16.55■□□□□ 0.24
TUBB3-202ENST00000553656 FAM196BA6NMK8 535 aa16.54■□□□□ 0.24
TUBB3-202ENST00000553656 USP17L12C9JPN9 530 aa16.54■□□□□ 0.24
TUBB3-202ENST00000553656 USP17L21D6R901 530 aa16.54■□□□□ 0.24
TUBB3-202ENST00000553656 CHMLP26374 656 aa16.54■□□□□ 0.24
TUBB3-202ENST00000553656 VGLL4Q14135 290 aa16.54■□□□□ 0.24
TUBB3-202ENST00000553656 IFNL3Q8IZI9 196 aa16.54■□□□□ 0.24
TUBB3-202ENST00000553656 MINDY4BA8MYZ0 360 aa16.53■□□□□ 0.24
TUBB3-202ENST00000553656 CYP2D6P10635 497 aa16.53■□□□□ 0.24
TUBB3-202ENST00000553656 PLCD1P51178 756 aa16.53■□□□□ 0.24
TUBB3-202ENST00000553656 MAP3K10Q02779 954 aa16.53■□□□□ 0.24
TUBB3-202ENST00000553656 CYP4F22Q6NT55 531 aa16.53■□□□□ 0.24
TUBB3-202ENST00000553656 ZNF589Q86UQ0 364 aaPredicted RBP16.53■□□□□ 0.24
TUBB3-202ENST00000553656 CLMNQ96JQ2 1002 aa16.53■□□□□ 0.24
TUBB3-202ENST00000553656 CAPNS2Q96L46 248 aa16.53■□□□□ 0.24
TUBB3-202ENST00000553656 EPB41L4AQ9HCS5 686 aaPredicted RBP16.53■□□□□ 0.24
TUBB3-202ENST00000553656 PICK1Q9NRD5 415 aa16.53■□□□□ 0.24
TUBB3-202ENST00000553656 ZNF112Q9UJU3 913 aa16.53■□□□□ 0.24
TUBB3-202ENST00000553656 TAOK2Q9UL54 1235 aa16.53■□□□□ 0.24
TUBB3-202ENST00000553656 CTNND1O60716 968 aaKnown RBP16.52■□□□□ 0.24
TUBB3-202ENST00000553656 CDC45O75419 566 aa16.52■□□□□ 0.24
TUBB3-202ENST00000553656 SLC3A2P08195 630 aaKnown RBP16.52■□□□□ 0.24
TUBB3-202ENST00000553656 INPP5BP32019 993 aa16.52■□□□□ 0.24
TUBB3-202ENST00000553656 SBK1Q52WX2 424 aa16.52■□□□□ 0.24
TUBB3-202ENST00000553656 C12orf60Q5U649 245 aa16.52■□□□□ 0.24
TUBB3-202ENST00000553656 CTR9Q6PD62 1173 aa16.52■□□□□ 0.24
TUBB3-202ENST00000553656 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.52■□□□□ 0.24
TUBB3-202ENST00000553656 METTL16Q86W50 562 aaKnown RBP16.52■□□□□ 0.24
TUBB3-202ENST00000553656 ZKSCAN4Q969J2 545 aaPredicted RBP16.52■□□□□ 0.24
TUBB3-202ENST00000553656 ELP3Q9H9T3 547 aa16.52■□□□□ 0.24
TUBB3-202ENST00000553656 SWAP70Q9UH65 585 aa16.52■□□□□ 0.24
TUBB3-202ENST00000553656 BAZ2AQ9UIF9 1905 aaKnown RBP16.52■□□□□ 0.23
TUBB3-202ENST00000553656 OTOFQ9HC10 1997 aa16.51■□□□□ 0.23
TUBB3-202ENST00000553656 WDR33Q9C0J8 1336 aaKnown RBP16.51■□□□□ 0.23
TUBB3-202ENST00000553656 PHF20L1A8MW92 1017 aa16.51■□□□□ 0.23
TUBB3-202ENST00000553656 SLC10A3P09131 477 aa16.51■□□□□ 0.23
TUBB3-202ENST00000553656 SLURP2P0DP57 97 aa16.51■□□□□ 0.23
TUBB3-202ENST00000553656 HSPD1P10809 573 aaKnown RBP16.51■□□□□ 0.23
TUBB3-202ENST00000553656 NOGQ13253 232 aa16.51■□□□□ 0.23
TUBB3-202ENST00000553656 VPS53Q5VIR6 699 aa16.51■□□□□ 0.23
TUBB3-202ENST00000553656 RASAL3Q86YV0 1011 aa16.51■□□□□ 0.23
TUBB3-202ENST00000553656 SCYL3Q8IZE3 742 aa16.51■□□□□ 0.23
TUBB3-202ENST00000553656 ZNF287Q9HBT7 754 aa16.51■□□□□ 0.23
TUBB3-202ENST00000553656 GTF3C3Q9Y5Q9 886 aa16.51■□□□□ 0.23
TUBB3-202ENST00000553656 SIPA1L1O43166 1804 aa16.5■□□□□ 0.23
TUBB3-202ENST00000553656 CYP2D7A0A087X1C5 515 aa16.5■□□□□ 0.23
TUBB3-202ENST00000553656 VEGFBP49765 207 aa16.5■□□□□ 0.23
TUBB3-202ENST00000553656 NOL9Q5SY16 702 aaKnown RBP16.5■□□□□ 0.23
TUBB3-202ENST00000553656 KIAA1211Q6ZU35 1233 aa16.5■□□□□ 0.23
TUBB3-202ENST00000553656 ERO1BQ86YB8 467 aa16.5■□□□□ 0.23
TUBB3-202ENST00000553656 SNCAIPQ9Y6H5 919 aa16.5■□□□□ 0.23
TUBB3-202ENST00000553656 SPDYE5A6NIY4 337 aa16.49■□□□□ 0.23
TUBB3-202ENST00000553656 CAP2P40123 477 aa16.49■□□□□ 0.23
TUBB3-202ENST00000553656 GABPAQ06546 454 aa16.49■□□□□ 0.23
TUBB3-202ENST00000553656 ALX1Q15699 326 aa16.49■□□□□ 0.23
TUBB3-202ENST00000553656 CERKLQ49MI3 558 aaPredicted RBP16.49■□□□□ 0.23
TUBB3-202ENST00000553656 OPTNQ96CV9 577 aa16.49■□□□□ 0.23
TUBB3-202ENST00000553656 DYNLL2Q96FJ2 89 aa16.49■□□□□ 0.23
TUBB3-202ENST00000553656 OTUD5Q96G74 571 aa16.49■□□□□ 0.23
TUBB3-202ENST00000553656 WNK4Q96J92 1243 aa16.49■□□□□ 0.23
TUBB3-202ENST00000553656 DSCC1Q9BVC3 393 aa16.49■□□□□ 0.23
TUBB3-202ENST00000553656 DNAJC18Q9H819 358 aa16.49■□□□□ 0.23
TUBB3-202ENST00000553656 LAMB1P07942 1786 aa16.49■□□□□ 0.23
TUBB3-202ENST00000553656 ZMYM6O95789 1325 aa16.48■□□□□ 0.23
TUBB3-202ENST00000553656 SGSM2O43147 1006 aa16.48■□□□□ 0.23
TUBB3-202ENST00000553656 ASNSP08243 561 aa16.48■□□□□ 0.23
TUBB3-202ENST00000553656 ZBTB48P10074 688 aaPredicted RBP16.48■□□□□ 0.23
TUBB3-202ENST00000553656 PPARAQ07869 468 aa16.48■□□□□ 0.23
TUBB3-202ENST00000553656 MKRN3Q13064 507 aaKnown RBP16.48■□□□□ 0.23
TUBB3-202ENST00000553656 SPRYD7Q5W111 196 aa16.48■□□□□ 0.23
TUBB3-202ENST00000553656 TATDN1Q6P1N9 297 aa16.48■□□□□ 0.23
TUBB3-202ENST00000553656 C16orf86Q6ZW13 317 aa16.48■□□□□ 0.23
TUBB3-202ENST00000553656 STK11IPQ8N1F8 1099 aa16.48■□□□□ 0.23
TUBB3-202ENST00000553656 SLC44A5Q8NCS7 719 aa16.48■□□□□ 0.23
TUBB3-202ENST00000553656 MKNK2Q9HBH9 465 aa16.48■□□□□ 0.23
TUBB3-202ENST00000553656 CABP5Q9NP86 173 aa16.48■□□□□ 0.23
TUBB3-202ENST00000553656 GINM1Q9NU53 330 aa16.48■□□□□ 0.23
TUBB3-202ENST00000553656 CTNNA3Q9UI47 895 aa16.48■□□□□ 0.23
TUBB3-202ENST00000553656 DOCK1Q14185 1865 aa16.48■□□□□ 0.23
TUBB3-202ENST00000553656 FAM155AB1AL88 458 aaPredicted RBP16.47■□□□□ 0.23
TUBB3-202ENST00000553656 MPHOSPH10O00566 681 aaKnown RBP16.47■□□□□ 0.23
TUBB3-202ENST00000553656 FOXP2O15409 715 aa16.47■□□□□ 0.23
TUBB3-202ENST00000553656 GDF11O95390 407 aa16.47■□□□□ 0.23
TUBB3-202ENST00000553656 FGAP02671 866 aa16.47■□□□□ 0.23
TUBB3-202ENST00000553656 SHMT1P34896 483 aa16.47■□□□□ 0.23
TUBB3-202ENST00000553656 MAP2K2P36507 400 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms