RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 MAST2Q6P0Q8 1798 aa16.52■□□□□ 0.24
TROAP-213ENST00000550709 TBC1D12O60347 775 aa16.52■□□□□ 0.24
TROAP-213ENST00000550709 CENPQQ7L2Z9 268 aaPredicted RBP16.52■□□□□ 0.24
TROAP-213ENST00000550709 STRBPQ96SI9 672 aaKnown RBP16.52■□□□□ 0.24
TROAP-213ENST00000550709 HERC5Q9UII4 1024 aaKnown RBP16.52■□□□□ 0.24
TROAP-213ENST00000550709 MYO5AQ9Y4I1 1855 aaKnown RBP16.52■□□□□ 0.23
TROAP-213ENST00000550709 GPAA1O43292 621 aa16.51■□□□□ 0.23
TROAP-213ENST00000550709 CYP2D6P10635 497 aa16.51■□□□□ 0.23
TROAP-213ENST00000550709 PLCD1P51178 756 aa16.51■□□□□ 0.23
TROAP-213ENST00000550709 EVX2Q03828 476 aa16.51■□□□□ 0.23
TROAP-213ENST00000550709 ZMYM1Q5SVZ6 1142 aa16.51■□□□□ 0.23
TROAP-213ENST00000550709 TTC6Q86TZ1 520 aa16.51■□□□□ 0.23
TROAP-213ENST00000550709 SKAP1Q86WV1 359 aa16.51■□□□□ 0.23
TROAP-213ENST00000550709 ERO1BQ86YB8 467 aa16.51■□□□□ 0.23
TROAP-213ENST00000550709 FOXP4Q8IVH2 680 aaPredicted RBP16.51■□□□□ 0.23
TROAP-213ENST00000550709 DDRGK1Q96HY6 314 aa16.51■□□□□ 0.23
TROAP-213ENST00000550709 PICK1Q9NRD5 415 aa16.51■□□□□ 0.23
TROAP-213ENST00000550709 ATP8A2Q9NTI2 1148 aa16.51■□□□□ 0.23
TROAP-213ENST00000550709 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.51■□□□□ 0.23
TROAP-213ENST00000550709 TSKSQ9UJT2 592 aa16.51■□□□□ 0.23
TROAP-213ENST00000550709 COL2A1P02458 1487 aaPredicted RBP16.5■□□□□ 0.23
TROAP-213ENST00000550709 SPDYE5A6NIY4 337 aa16.5■□□□□ 0.23
TROAP-213ENST00000550709 FOXN1O15353 648 aa16.5■□□□□ 0.23
TROAP-213ENST00000550709 APPP05067 770 aa16.5■□□□□ 0.23
TROAP-213ENST00000550709 ZBTB48P10074 688 aaPredicted RBP16.5■□□□□ 0.23
TROAP-213ENST00000550709 RRP1BQ14684 758 aaKnown RBP16.5■□□□□ 0.23
TROAP-213ENST00000550709 NOL9Q5SY16 702 aaKnown RBP16.5■□□□□ 0.23
TROAP-213ENST00000550709 CCDC129Q6ZRS4 1044 aa16.5■□□□□ 0.23
TROAP-213ENST00000550709 CCDC84Q86UT8 332 aaPredicted RBP16.5■□□□□ 0.23
TROAP-213ENST00000550709 SCYL3Q8IZE3 742 aa16.5■□□□□ 0.23
TROAP-213ENST00000550709 DNAJC18Q9H819 358 aa16.5■□□□□ 0.23
TROAP-213ENST00000550709 CYP2D7A0A087X1C5 515 aa16.49■□□□□ 0.23
TROAP-213ENST00000550709 USP17L12C9JPN9 530 aa16.49■□□□□ 0.23
TROAP-213ENST00000550709 USP17L21D6R901 530 aa16.49■□□□□ 0.23
TROAP-213ENST00000550709 CTNND1O60716 968 aaKnown RBP16.49■□□□□ 0.23
TROAP-213ENST00000550709 SREBF2Q12772 1141 aa16.49■□□□□ 0.23
TROAP-213ENST00000550709 TTC22Q5TAA0 569 aa16.49■□□□□ 0.23
TROAP-213ENST00000550709 FAM227BQ96M60 508 aa16.49■□□□□ 0.23
TROAP-213ENST00000550709 SERPINB13Q9UIV8 391 aa16.49■□□□□ 0.23
TROAP-213ENST00000550709 ZHX2Q9Y6X8 837 aa16.49■□□□□ 0.23
TROAP-213ENST00000550709 DOCK2Q92608 1830 aa16.48■□□□□ 0.23
TROAP-213ENST00000550709 MANSC4A6NHS7 340 aaPredicted RBP16.48■□□□□ 0.23
TROAP-213ENST00000550709 GSG1L2A8MUP6 293 aa16.48■□□□□ 0.23
TROAP-213ENST00000550709 IRF6O14896 467 aa16.48■□□□□ 0.23
TROAP-213ENST00000550709 TRPA1O75762 1119 aa16.48■□□□□ 0.23
TROAP-213ENST00000550709 PTPRAP18433 802 aa16.48■□□□□ 0.23
TROAP-213ENST00000550709 NMIQ13287 307 aaPredicted RBP16.48■□□□□ 0.23
TROAP-213ENST00000550709 METTL16Q86W50 562 aaKnown RBP16.48■□□□□ 0.23
TROAP-213ENST00000550709 DYNLL2Q96FJ2 89 aa16.48■□□□□ 0.23
TROAP-213ENST00000550709 A0A0D9SFI3 127 aa16.47■□□□□ 0.23
TROAP-213ENST00000550709 SMIM22K7EJ46 135 aa16.47■□□□□ 0.23
TROAP-213ENST00000550709 GDF11O95390 407 aa16.47■□□□□ 0.23
TROAP-213ENST00000550709 GSPT1P15170 499 aaKnown RBP16.47■□□□□ 0.23
TROAP-213ENST00000550709 SDSP20132 328 aa16.47■□□□□ 0.23
TROAP-213ENST00000550709 CAP2P40123 477 aa16.47■□□□□ 0.23
TROAP-213ENST00000550709 TM4SF4P48230 202 aa16.47■□□□□ 0.23
TROAP-213ENST00000550709 GTF2A2P52657 109 aa16.47■□□□□ 0.23
TROAP-213ENST00000550709 PPATQ06203 517 aa16.47■□□□□ 0.23
TROAP-213ENST00000550709 PPIL2Q13356 520 aa16.47■□□□□ 0.23
TROAP-213ENST00000550709 SHROOM1Q2M3G4 852 aaPredicted RBP16.47■□□□□ 0.23
TROAP-213ENST00000550709 CTR9Q6PD62 1173 aa16.47■□□□□ 0.23
TROAP-213ENST00000550709 AMOTL1Q8IY63 956 aa16.47■□□□□ 0.23
TROAP-213ENST00000550709 REM2Q8IYK8 340 aaPredicted RBP16.47■□□□□ 0.23
TROAP-213ENST00000550709 MS4A4AQ96JQ5 239 aa16.47■□□□□ 0.23
TROAP-213ENST00000550709 EHD4Q9H223 541 aa16.47■□□□□ 0.23
TROAP-213ENST00000550709 RNF186Q9NXI6 227 aa16.47■□□□□ 0.23
TROAP-213ENST00000550709 CCL15-CCL14A0A0B4J2E2 113 aa16.46■□□□□ 0.23
TROAP-213ENST00000550709 GNAT2P19087 354 aa16.46■□□□□ 0.23
TROAP-213ENST00000550709 TDO2P48775 406 aa16.46■□□□□ 0.23
TROAP-213ENST00000550709 CTCFP49711 727 aaPredicted RBP16.46■□□□□ 0.23
TROAP-213ENST00000550709 JAG1P78504 1218 aa16.46■□□□□ 0.23
TROAP-213ENST00000550709 SNAPC2Q13487 334 aa16.46■□□□□ 0.23
TROAP-213ENST00000550709 CCL15Q16663 113 aa16.46■□□□□ 0.23
TROAP-213ENST00000550709 STK11IPQ8N1F8 1099 aa16.46■□□□□ 0.23
TROAP-213ENST00000550709 SLC44A5Q8NCS7 719 aa16.46■□□□□ 0.23
TROAP-213ENST00000550709 BRI3BPQ8WY22 251 aa16.46■□□□□ 0.23
TROAP-213ENST00000550709 HELLSQ9NRZ9 838 aa16.46■□□□□ 0.23
TROAP-213ENST00000550709 DIAPH3Q9NSV4 1193 aa16.46■□□□□ 0.23
TROAP-213ENST00000550709 AK9Q5TCS8 1911 aa16.45■□□□□ 0.22
TROAP-213ENST00000550709 TRIM75PA6NK02 468 aa16.45■□□□□ 0.22
TROAP-213ENST00000550709 MINDY4BA8MYZ0 360 aa16.45■□□□□ 0.22
TROAP-213ENST00000550709 PATL2C9JE40 543 aaKnown RBP16.45■□□□□ 0.22
TROAP-213ENST00000550709 IGF2BP3O00425 579 aaKnown RBP eCLIP16.45■□□□□ 0.22
TROAP-213ENST00000550709 INHBEP58166 350 aa16.45■□□□□ 0.22
TROAP-213ENST00000550709 MCMDC2Q4G0Z9 681 aa16.45■□□□□ 0.22
TROAP-213ENST00000550709 C12orf60Q5U649 245 aa16.45■□□□□ 0.22
TROAP-213ENST00000550709 IFNL1Q8IU54 200 aa16.45■□□□□ 0.22
TROAP-213ENST00000550709 EPB41L4AQ9HCS5 686 aaPredicted RBP16.45■□□□□ 0.22
TROAP-213ENST00000550709 CA12O43570 354 aa16.44■□□□□ 0.22
TROAP-213ENST00000550709 GH2P01242 217 aa16.44■□□□□ 0.22
TROAP-213ENST00000550709 HSPA8P11142 646 aaKnown RBP16.44■□□□□ 0.22
TROAP-213ENST00000550709 CETPP11597 493 aa16.44■□□□□ 0.22
TROAP-213ENST00000550709 SHMT1P34896 483 aa16.44■□□□□ 0.22
TROAP-213ENST00000550709 LBX1P52954 281 aa16.44■□□□□ 0.22
TROAP-213ENST00000550709 GABPAQ06546 454 aa16.44■□□□□ 0.22
TROAP-213ENST00000550709 CERKLQ49MI3 558 aaPredicted RBP16.44■□□□□ 0.22
TROAP-213ENST00000550709 IFFO2Q5TF58 517 aa16.44■□□□□ 0.22
TROAP-213ENST00000550709 VPS53Q5VIR6 699 aa16.44■□□□□ 0.22
TROAP-213ENST00000550709 GIMAP6Q6P9H5 292 aa16.44■□□□□ 0.22
TROAP-213ENST00000550709 CWC27Q6UX04 472 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms