RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 CIAPIN1Q6FI81 312 aa7.67□□□□□ -1.18
DEPDC4-209ENST00000550587 DPP8Q6V1X1 898 aaPredicted RBP7.67□□□□□ -1.18
DEPDC4-209ENST00000550587 TTLL7Q6ZT98 887 aa7.67□□□□□ -1.18
DEPDC4-209ENST00000550587 TMC4Q7Z404 712 aa7.67□□□□□ -1.18
DEPDC4-209ENST00000550587 RPAP2Q8IXW5 612 aaPredicted RBP7.67□□□□□ -1.18
DEPDC4-209ENST00000550587 SP8Q8IXZ3 490 aa7.67□□□□□ -1.18
DEPDC4-209ENST00000550587 CAPNS2Q96L46 248 aa7.67□□□□□ -1.18
DEPDC4-209ENST00000550587 CNTNAP3BQ96NU0 1288 aa7.67□□□□□ -1.18
DEPDC4-209ENST00000550587 METTL22Q9BUU2 404 aaPredicted RBP7.67□□□□□ -1.18
DEPDC4-209ENST00000550587 CNTNAP3Q9BZ76 1288 aa7.67□□□□□ -1.18
DEPDC4-209ENST00000550587 TRMT112Q9UI30 125 aaKnown RBP7.67□□□□□ -1.18
DEPDC4-209ENST00000550587 ZNRF3Q9ULT6 936 aa7.67□□□□□ -1.18
DEPDC4-209ENST00000550587 HDAC5Q9UQL6 1122 aa7.67□□□□□ -1.18
DEPDC4-209ENST00000550587 ATP6V0A2Q9Y487 856 aa7.67□□□□□ -1.18
DEPDC4-209ENST00000550587 RIC1Q4ADV7 1423 aa7.67□□□□□ -1.18
DEPDC4-209ENST00000550587 NTSR2O95665 410 aa7.66□□□□□ -1.18
DEPDC4-209ENST00000550587 GNAI2P04899 355 aa7.66□□□□□ -1.18
DEPDC4-209ENST00000550587 HSP90B1P14625 803 aaKnown RBP7.66□□□□□ -1.18
DEPDC4-209ENST00000550587 AOC3Q16853 763 aa7.66□□□□□ -1.18
DEPDC4-209ENST00000550587 SLC10A5Q5PT55 438 aa7.66□□□□□ -1.18
DEPDC4-209ENST00000550587 CCDC155Q8N6L0 562 aa7.66□□□□□ -1.18
DEPDC4-209ENST00000550587 INSM2Q96T92 566 aaPredicted RBP7.66□□□□□ -1.18
DEPDC4-209ENST00000550587 MEIS3Q99687 375 aa7.66□□□□□ -1.18
DEPDC4-209ENST00000550587 GPRC5DQ9NZD1 345 aa7.66□□□□□ -1.18
DEPDC4-209ENST00000550587 CDHR2Q9BYE9 1310 aa7.66□□□□□ -1.18
DEPDC4-209ENST00000550587 UTYO14607 1347 aa7.65□□□□□ -1.18
DEPDC4-209ENST00000550587 CELF2O95319 508 aaKnown RBP7.65□□□□□ -1.18
DEPDC4-209ENST00000550587 IGKV5-2P06315 115 aa7.65□□□□□ -1.18
DEPDC4-209ENST00000550587 USP17L8P0C7I0 530 aa7.65□□□□□ -1.18
DEPDC4-209ENST00000550587 HSPA8P11142 646 aaKnown RBP7.65□□□□□ -1.18
DEPDC4-209ENST00000550587 SCNN1DP51172 638 aa7.65□□□□□ -1.18
DEPDC4-209ENST00000550587 TRIM28Q13263 835 aaKnown RBP7.65□□□□□ -1.18
DEPDC4-209ENST00000550587 CYP4F22Q6NT55 531 aa7.65□□□□□ -1.18
DEPDC4-209ENST00000550587 UBN2Q6ZU65 1347 aa7.65□□□□□ -1.18
DEPDC4-209ENST00000550587 CDC37L1Q7L3B6 337 aa7.65□□□□□ -1.18
DEPDC4-209ENST00000550587 ANKRD44Q8N8A2 993 aa7.65□□□□□ -1.18
DEPDC4-209ENST00000550587 SH3TC1Q8TE82 1336 aa7.65□□□□□ -1.18
DEPDC4-209ENST00000550587 ABHD8Q96I13 439 aa7.65□□□□□ -1.18
DEPDC4-209ENST00000550587 ABCC12Q96J65 1359 aa7.65□□□□□ -1.18
DEPDC4-209ENST00000550587 HHIPL1Q96JK4 782 aa7.65□□□□□ -1.18
DEPDC4-209ENST00000550587 ZNF395Q9H8N7 513 aaPredicted RBP7.65□□□□□ -1.18
DEPDC4-209ENST00000550587 ZNF408Q9H9D4 720 aa7.65□□□□□ -1.18
DEPDC4-209ENST00000550587 C9orf78Q9NZ63 289 aaPredicted RBP7.65□□□□□ -1.18
DEPDC4-209ENST00000550587 GPSM3Q9Y4H4 160 aa7.65□□□□□ -1.18
DEPDC4-209ENST00000550587 SLC35F4A4IF30 521 aa7.64□□□□□ -1.19
DEPDC4-209ENST00000550587 CCDC85CA6NKD9 419 aa7.64□□□□□ -1.19
DEPDC4-209ENST00000550587 NEURL1BA8MQ27 555 aa7.64□□□□□ -1.19
DEPDC4-209ENST00000550587 NBPF7P0C2Y1 421 aaPredicted RBP7.64□□□□□ -1.19
DEPDC4-209ENST00000550587 UBTFL1P0CB47 393 aaPredicted RBP7.64□□□□□ -1.19
DEPDC4-209ENST00000550587 ATP8B2P98198 1209 aa7.64□□□□□ -1.19
DEPDC4-209ENST00000550587 CXCL9Q07325 125 aa7.64□□□□□ -1.19
DEPDC4-209ENST00000550587 KIAA2012Q0VF49 1180 aa7.64□□□□□ -1.19
DEPDC4-209ENST00000550587 TCIRG1Q13488 830 aa7.64□□□□□ -1.19
DEPDC4-209ENST00000550587 GRAPQ13588 217 aa7.64□□□□□ -1.19
DEPDC4-209ENST00000550587 GCKRQ14397 625 aa7.64□□□□□ -1.19
DEPDC4-209ENST00000550587 WASHC4Q2M389 1173 aa7.64□□□□□ -1.19
DEPDC4-209ENST00000550587 CWF19L2Q2TBE0 894 aaKnown RBP7.64□□□□□ -1.19
DEPDC4-209ENST00000550587 SIRT2Q8IXJ6 389 aa7.64□□□□□ -1.19
DEPDC4-209ENST00000550587 SMC5Q8IY18 1101 aa7.64□□□□□ -1.19
DEPDC4-209ENST00000550587 GRAPLQ8TC17 118 aaPredicted RBP7.64□□□□□ -1.19
DEPDC4-209ENST00000550587 EYA3Q99504 573 aa7.64□□□□□ -1.19
DEPDC4-209ENST00000550587 MYD88Q99836 296 aa7.64□□□□□ -1.19
DEPDC4-209ENST00000550587 COL25A1Q9BXS0 654 aaPredicted RBP7.64□□□□□ -1.19
DEPDC4-209ENST00000550587 RTFDC1Q9BY42 306 aaPredicted RBP7.64□□□□□ -1.19
DEPDC4-209ENST00000550587 POLMQ9NP87 494 aaPredicted RBP7.64□□□□□ -1.19
DEPDC4-209ENST00000550587 GRM8O00222 908 aa7.63□□□□□ -1.19
DEPDC4-209ENST00000550587 TRAF5O00463 557 aa7.63□□□□□ -1.19
DEPDC4-209ENST00000550587 HMMRO75330 724 aa7.63□□□□□ -1.19
DEPDC4-209ENST00000550587 RAD17O75943 681 aa7.63□□□□□ -1.19
DEPDC4-209ENST00000550587 HCLS1P14317 486 aaPredicted RBP7.63□□□□□ -1.19
DEPDC4-209ENST00000550587 ADD1P35611 737 aaKnown RBP7.63□□□□□ -1.19
DEPDC4-209ENST00000550587 RGS19P49795 217 aa7.63□□□□□ -1.19
DEPDC4-209ENST00000550587 GMPSP49915 693 aaPredicted RBP7.63□□□□□ -1.19
DEPDC4-209ENST00000550587 CST9Q5W186 159 aa7.63□□□□□ -1.19
DEPDC4-209ENST00000550587 CEP85Q6P2H3 762 aa7.63□□□□□ -1.19
DEPDC4-209ENST00000550587 SAPCD2Q86UD0 394 aa7.63□□□□□ -1.19
DEPDC4-209ENST00000550587 C2orf69Q8N8R5 385 aa7.63□□□□□ -1.19
DEPDC4-209ENST00000550587 CCDC191Q8NCU4 936 aa7.63□□□□□ -1.19
DEPDC4-209ENST00000550587 NANOS1Q8WY41 292 aaKnown RBP7.63□□□□□ -1.19
DEPDC4-209ENST00000550587 DCPSQ96C86 337 aaKnown RBP7.63□□□□□ -1.19
DEPDC4-209ENST00000550587 GCC1Q96CN9 775 aa7.63□□□□□ -1.19
DEPDC4-209ENST00000550587 ISCA1Q9BUE6 129 aa7.63□□□□□ -1.19
DEPDC4-209ENST00000550587 DCTPP1Q9H773 170 aa7.63□□□□□ -1.19
DEPDC4-209ENST00000550587 C1orf115Q9H7X2 142 aa7.63□□□□□ -1.19
DEPDC4-209ENST00000550587 CNOT7Q9UIV1 285 aaKnown RBP7.63□□□□□ -1.19
DEPDC4-209ENST00000550587 NSFL1CQ9UNZ2 370 aaKnown RBP7.63□□□□□ -1.19
DEPDC4-209ENST00000550587 ADAMTSL1Q8N6G6 1762 aa7.63□□□□□ -1.19
DEPDC4-209ENST00000550587 TRPM7Q96QT4 1865 aa7.62□□□□□ -1.19
DEPDC4-209ENST00000550587 ATP5J2-PTCD1G3V325 749 aa7.62□□□□□ -1.19
DEPDC4-209ENST00000550587 H7C1W4 665 aa7.62□□□□□ -1.19
DEPDC4-209ENST00000550587 ERVH48-1M5A8F1 160 aa7.62□□□□□ -1.19
DEPDC4-209ENST00000550587 RPS12P25398 132 aaKnown RBP7.62□□□□□ -1.19
DEPDC4-209ENST00000550587 RFC5P40937 340 aa7.62□□□□□ -1.19
DEPDC4-209ENST00000550587 NOGQ13253 232 aa7.62□□□□□ -1.19
DEPDC4-209ENST00000550587 MTX1Q13505 466 aa7.62□□□□□ -1.19
DEPDC4-209ENST00000550587 RNFT1Q5M7Z0 435 aa7.62□□□□□ -1.19
DEPDC4-209ENST00000550587 NLRP10Q86W26 655 aa7.62□□□□□ -1.19
DEPDC4-209ENST00000550587 VWA5B2Q8N398 1253 aa7.62□□□□□ -1.19
DEPDC4-209ENST00000550587 SSH3Q8TE77 659 aa7.62□□□□□ -1.19
DEPDC4-209ENST00000550587 DPF2Q92785 391 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 168.4 ms