RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 JMYQ8N9B5 988 aa27.07■■□□□ 1.92
BRF1-216ENST00000550208 FAM227BQ96M60 508 aa27.07■■□□□ 1.92
BRF1-216ENST00000550208 CSADQ9Y600 493 aa27.07■■□□□ 1.92
BRF1-216ENST00000550208 MYH1P12882 1939 aa27.06■■□□□ 1.92
BRF1-216ENST00000550208 CEP350Q5VT06 3117 aa27.06■■□□□ 1.92
BRF1-216ENST00000550208 HLA-DOAP06340 250 aa27.06■■□□□ 1.92
BRF1-216ENST00000550208 PLCD1P51178 756 aa27.06■■□□□ 1.92
BRF1-216ENST00000550208 CCDC129Q6ZRS4 1044 aa27.06■■□□□ 1.92
BRF1-216ENST00000550208 TTC6Q86TZ1 520 aa27.06■■□□□ 1.92
BRF1-216ENST00000550208 SNCAIPQ9Y6H5 919 aa27.06■■□□□ 1.92
BRF1-216ENST00000550208 GSG1L2A8MUP6 293 aa27.05■■□□□ 1.92
BRF1-216ENST00000550208 CYP2D6P10635 497 aa27.05■■□□□ 1.92
BRF1-216ENST00000550208 MAP2K2P36507 400 aa27.05■■□□□ 1.92
BRF1-216ENST00000550208 KIF23Q02241 960 aaPredicted RBP27.05■■□□□ 1.92
BRF1-216ENST00000550208 NOGQ13253 232 aa27.05■■□□□ 1.92
BRF1-216ENST00000550208 NMIQ13287 307 aaPredicted RBP27.05■■□□□ 1.92
BRF1-216ENST00000550208 SPRYD7Q5W111 196 aa27.05■■□□□ 1.92
BRF1-216ENST00000550208 METTL16Q86W50 562 aaKnown RBP27.05■■□□□ 1.92
BRF1-216ENST00000550208 CNKSR2Q8WXI2 1034 aa27.05■■□□□ 1.92
BRF1-216ENST00000550208 WNK4Q96J92 1243 aa27.05■■□□□ 1.92
BRF1-216ENST00000550208 HELLSQ9NRZ9 838 aa27.05■■□□□ 1.92
BRF1-216ENST00000550208 HERC5Q9UII4 1024 aaKnown RBP27.05■■□□□ 1.92
BRF1-216ENST00000550208 A0A0D9SFI3 127 aa27.04■■□□□ 1.92
BRF1-216ENST00000550208 GJA5P36382 358 aa27.04■■□□□ 1.92
BRF1-216ENST00000550208 EVX2Q03828 476 aa27.04■■□□□ 1.92
BRF1-216ENST00000550208 RRP1BQ14684 758 aaKnown RBP27.04■■□□□ 1.92
BRF1-216ENST00000550208 CRACR2BQ8N4Y2 399 aaPredicted RBP27.04■■□□□ 1.92
BRF1-216ENST00000550208 PATL2C9JE40 543 aaKnown RBP27.03■■□□□ 1.92
BRF1-216ENST00000550208 MCMDC2Q4G0Z9 681 aa27.03■■□□□ 1.92
BRF1-216ENST00000550208 DNAJC18Q9H819 358 aa27.03■■□□□ 1.92
BRF1-216ENST00000550208 OTOFQ9HC10 1997 aa27.03■■□□□ 1.92
BRF1-216ENST00000550208 SIPA1L1O43166 1804 aa27.02■■□□□ 1.92
BRF1-216ENST00000550208 USP17L12C9JPN9 530 aa27.02■■□□□ 1.92
BRF1-216ENST00000550208 USP17L21D6R901 530 aa27.02■■□□□ 1.92
BRF1-216ENST00000550208 GNAT2P19087 354 aa27.02■■□□□ 1.92
BRF1-216ENST00000550208 OPTNQ96CV9 577 aa27.02■■□□□ 1.92
BRF1-216ENST00000550208 TRIM34Q9BYJ4 488 aa27.02■■□□□ 1.92
BRF1-216ENST00000550208 CYP2D7A0A087X1C5 515 aa27.01■■□□□ 1.91
BRF1-216ENST00000550208 SMIM22K7EJ46 135 aa27.01■■□□□ 1.91
BRF1-216ENST00000550208 CTNND1O60716 968 aaKnown RBP27.01■■□□□ 1.91
BRF1-216ENST00000550208 APPP05067 770 aa27.01■■□□□ 1.91
BRF1-216ENST00000550208 NOL9Q5SY16 702 aaKnown RBP27.01■■□□□ 1.91
BRF1-216ENST00000550208 CTR9Q6PD62 1173 aa27.01■■□□□ 1.91
BRF1-216ENST00000550208 DDRGK1Q96HY6 314 aa27.01■■□□□ 1.91
BRF1-216ENST00000550208 EHD4Q9H223 541 aa27.01■■□□□ 1.91
BRF1-216ENST00000550208 SERPINB13Q9UIV8 391 aa27.01■■□□□ 1.91
BRF1-216ENST00000550208 C12orf60Q5U649 245 aa27■■□□□ 1.91
BRF1-216ENST00000550208 GIMAP6Q6P9H5 292 aa27■■□□□ 1.91
BRF1-216ENST00000550208 SCYL3Q8IZE3 742 aa27■■□□□ 1.91
BRF1-216ENST00000550208 BAZ2AQ9UIF9 1905 aaKnown RBP27■■□□□ 1.91
BRF1-216ENST00000550208 NAV1Q8NEY1 1877 aa27■■□□□ 1.91
BRF1-216ENST00000550208 SPDYE5A6NIY4 337 aa26.99■■□□□ 1.91
BRF1-216ENST00000550208 CWC27Q6UX04 472 aaKnown RBP26.99■■□□□ 1.91
BRF1-216ENST00000550208 ERO1BQ86YB8 467 aa26.99■■□□□ 1.91
BRF1-216ENST00000550208 IFNL3Q8IZI9 196 aa26.99■■□□□ 1.91
BRF1-216ENST00000550208 OTUD5Q96G74 571 aa26.99■■□□□ 1.91
BRF1-216ENST00000550208 EPB41L4AQ9HCS5 686 aaPredicted RBP26.99■■□□□ 1.91
BRF1-216ENST00000550208 DIAPH3Q9NSV4 1193 aa26.99■■□□□ 1.91
BRF1-216ENST00000550208 HIP1O00291 1037 aa26.98■■□□□ 1.91
BRF1-216ENST00000550208 ZBTB48P10074 688 aaPredicted RBP26.98■■□□□ 1.91
BRF1-216ENST00000550208 CAP2P40123 477 aa26.98■■□□□ 1.91
BRF1-216ENST00000550208 GABPAQ06546 454 aa26.98■■□□□ 1.91
BRF1-216ENST00000550208 VPS53Q5VIR6 699 aa26.98■■□□□ 1.91
BRF1-216ENST00000550208 DYNLL2Q96FJ2 89 aa26.98■■□□□ 1.91
BRF1-216ENST00000550208 FOXP2O15409 715 aa26.97■■□□□ 1.91
BRF1-216ENST00000550208 JAG1P78504 1218 aa26.97■■□□□ 1.91
BRF1-216ENST00000550208 SBK1Q52WX2 424 aa26.97■■□□□ 1.91
BRF1-216ENST00000550208 ZNF589Q86UQ0 364 aaPredicted RBP26.97■■□□□ 1.91
BRF1-216ENST00000550208 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.97■■□□□ 1.91
BRF1-216ENST00000550208 DDX60LQ5H9U9 1706 aaKnown RBP26.96■■□□□ 1.91
BRF1-216ENST00000550208 PTPRAP18433 802 aa26.96■■□□□ 1.91
BRF1-216ENST00000550208 PPATQ06203 517 aa26.96■■□□□ 1.91
BRF1-216ENST00000550208 TATDN1Q6P1N9 297 aa26.96■■□□□ 1.91
BRF1-216ENST00000550208 AMOTL1Q8IY63 956 aa26.96■■□□□ 1.91
BRF1-216ENST00000550208 PICK1Q9NRD5 415 aa26.96■■□□□ 1.91
BRF1-216ENST00000550208 MINDY4BA8MYZ0 360 aa26.95■■□□□ 1.9
BRF1-216ENST00000550208 SHMT1P34896 483 aa26.95■■□□□ 1.9
BRF1-216ENST00000550208 TDO2P48775 406 aa26.95■■□□□ 1.9
BRF1-216ENST00000550208 MAP2K1Q02750 393 aaPredicted RBP26.95■■□□□ 1.9
BRF1-216ENST00000550208 SHROOM1Q2M3G4 852 aaPredicted RBP26.95■■□□□ 1.9
BRF1-216ENST00000550208 CCDC84Q86UT8 332 aaPredicted RBP26.95■■□□□ 1.9
BRF1-216ENST00000550208 NACAP1Q9BZK3 213 aa26.95■■□□□ 1.9
BRF1-216ENST00000550208 WBP1LQ9NX94 342 aa26.95■■□□□ 1.9
BRF1-216ENST00000550208 IRF6O14896 467 aa26.94■■□□□ 1.9
BRF1-216ENST00000550208 GDF11O95390 407 aa26.94■■□□□ 1.9
BRF1-216ENST00000550208 CHMLP26374 656 aa26.94■■□□□ 1.9
BRF1-216ENST00000550208 PPIL2Q13356 520 aa26.94■■□□□ 1.9
BRF1-216ENST00000550208 SLC44A5Q8NCS7 719 aa26.94■■□□□ 1.9
BRF1-216ENST00000550208 ARPP21Q9UBL0 812 aaPredicted RBP26.94■■□□□ 1.9
BRF1-216ENST00000550208 ZHX2Q9Y6X8 837 aa26.94■■□□□ 1.9
BRF1-216ENST00000550208 THSD7BQ9C0I4 1608 aa26.94■■□□□ 1.9
BRF1-216ENST00000550208 CCDC171Q6TFL3 1326 aa26.93■■□□□ 1.9
BRF1-216ENST00000550208 MANSC4A6NHS7 340 aaPredicted RBP26.93■■□□□ 1.9
BRF1-216ENST00000550208 TM4SF4P48230 202 aa26.93■■□□□ 1.9
BRF1-216ENST00000550208 CERKLQ49MI3 558 aaPredicted RBP26.93■■□□□ 1.9
BRF1-216ENST00000550208 REM2Q8IYK8 340 aaPredicted RBP26.93■■□□□ 1.9
BRF1-216ENST00000550208 MS4A4AQ96JQ5 239 aa26.93■■□□□ 1.9
BRF1-216ENST00000550208 HSPD1P10809 573 aaKnown RBP26.92■■□□□ 1.9
BRF1-216ENST00000550208 CDK8P49336 464 aa26.92■■□□□ 1.9
BRF1-216ENST00000550208 STK11IPQ8N1F8 1099 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms