RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 ZNF280CQ8ND82 737 aa11.18□□□□□ -0.62
UBE2N-203ENST00000549490 LPIN2Q92539 896 aa11.18□□□□□ -0.62
UBE2N-203ENST00000549490 NUDT12Q9BQG2 462 aa11.18□□□□□ -0.62
UBE2N-203ENST00000549490 PRKRIP1Q9H875 184 aaPredicted RBP11.18□□□□□ -0.62
UBE2N-203ENST00000549490 RAPGEFL1Q9UHV5 662 aa11.18□□□□□ -0.62
UBE2N-203ENST00000549490 MUC3AQ02505 3323 aa11.18□□□□□ -0.62
UBE2N-203ENST00000549490 GAKO14976 1311 aa11.17□□□□□ -0.62
UBE2N-203ENST00000549490 DNAH12Q6ZR08 3092 aa11.17□□□□□ -0.62
UBE2N-203ENST00000549490 PEX10O60683 326 aa11.17□□□□□ -0.62
UBE2N-203ENST00000549490 ZKSCAN1P17029 563 aaPredicted RBP11.17□□□□□ -0.62
UBE2N-203ENST00000549490 SHHQ15465 462 aa11.17□□□□□ -0.62
UBE2N-203ENST00000549490 CCL14Q16627 93 aa11.17□□□□□ -0.62
UBE2N-203ENST00000549490 TRMT44Q8IYL2 757 aaKnown RBP11.17□□□□□ -0.62
UBE2N-203ENST00000549490 SOCS4Q8WXH5 440 aa11.17□□□□□ -0.62
UBE2N-203ENST00000549490 USP6NLQ92738 828 aa11.17□□□□□ -0.62
UBE2N-203ENST00000549490 SENP6Q9GZR1 1112 aaPredicted RBP11.17□□□□□ -0.62
UBE2N-203ENST00000549490 TTYH1Q9H313 450 aaPredicted RBP11.17□□□□□ -0.62
UBE2N-203ENST00000549490 SALL1Q9NSC2 1324 aa11.16□□□□□ -0.62
UBE2N-203ENST00000549490 FAM196BA6NMK8 535 aa11.16□□□□□ -0.62
UBE2N-203ENST00000549490 TBC1D12O60347 775 aa11.16□□□□□ -0.62
UBE2N-203ENST00000549490 ATN1P54259 1190 aaPredicted RBP11.16□□□□□ -0.62
UBE2N-203ENST00000549490 PICALMQ13492 652 aa11.16□□□□□ -0.62
UBE2N-203ENST00000549490 SH3D19Q5HYK7 790 aa11.16□□□□□ -0.62
UBE2N-203ENST00000549490 C9orf50Q5SZB4 431 aa11.16□□□□□ -0.62
UBE2N-203ENST00000549490 P2RX7Q99572 595 aaKnown RBP11.16□□□□□ -0.62
UBE2N-203ENST00000549490 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.16□□□□□ -0.62
UBE2N-203ENST00000549490 TXNRD2Q9NNW7 524 aa11.16□□□□□ -0.62
UBE2N-203ENST00000549490 EYA2O00167 538 aa11.15□□□□□ -0.62
UBE2N-203ENST00000549490 TNFRSF10AO00220 468 aa11.15□□□□□ -0.62
UBE2N-203ENST00000549490 FOSL2P15408 326 aa11.15□□□□□ -0.62
UBE2N-203ENST00000549490 SMAD3P84022 425 aaKnown RBP11.15□□□□□ -0.62
UBE2N-203ENST00000549490 RRP1BQ14684 758 aaKnown RBP11.15□□□□□ -0.62
UBE2N-203ENST00000549490 GPRC5AQ8NFJ5 357 aa11.15□□□□□ -0.62
UBE2N-203ENST00000549490 FAM163AQ96GL9 167 aaPredicted RBP11.15□□□□□ -0.62
UBE2N-203ENST00000549490 TBC1D2Q9BYX2 928 aa11.15□□□□□ -0.62
UBE2N-203ENST00000549490 OSBPL5Q9H0X9 879 aaPredicted RBP11.15□□□□□ -0.62
UBE2N-203ENST00000549490 GNL3LQ9NVN8 582 aaKnown RBP11.15□□□□□ -0.62
UBE2N-203ENST00000549490 CDH23Q9H251 3354 aa11.14□□□□□ -0.63
UBE2N-203ENST00000549490 AK9Q5TCS8 1911 aa11.14□□□□□ -0.63
UBE2N-203ENST00000549490 USP17L5A8MUK1 530 aa11.14□□□□□ -0.63
UBE2N-203ENST00000549490 MAPK4P31152 587 aa11.14□□□□□ -0.63
UBE2N-203ENST00000549490 CAP2P40123 477 aa11.14□□□□□ -0.63
UBE2N-203ENST00000549490 RGS2P41220 211 aa11.14□□□□□ -0.63
UBE2N-203ENST00000549490 PHKA1P46020 1223 aa11.14□□□□□ -0.63
UBE2N-203ENST00000549490 RFX5P48382 616 aaPredicted RBP11.14□□□□□ -0.63
UBE2N-203ENST00000549490 IRX3P78415 501 aaPredicted RBP11.14□□□□□ -0.63
UBE2N-203ENST00000549490 PDE3AQ14432 1141 aa11.14□□□□□ -0.63
UBE2N-203ENST00000549490 Q3C1V9 767 aa11.14□□□□□ -0.63
UBE2N-203ENST00000549490 TJAP1Q5JTD0 557 aa11.14□□□□□ -0.63
UBE2N-203ENST00000549490 MORN1Q5T089 497 aa11.14□□□□□ -0.63
UBE2N-203ENST00000549490 ATG9AQ7Z3C6 839 aa11.14□□□□□ -0.63
UBE2N-203ENST00000549490 PORCNQ9H237 461 aa11.14□□□□□ -0.63
UBE2N-203ENST00000549490 RBPJLQ9UBG7 517 aa11.14□□□□□ -0.63
UBE2N-203ENST00000549490 PRKAG2Q9UGJ0 569 aa11.14□□□□□ -0.63
UBE2N-203ENST00000549490 DENND2AQ9ULE3 1009 aa11.14□□□□□ -0.63
UBE2N-203ENST00000549490 SEMA3EO15041 775 aa11.13□□□□□ -0.63
UBE2N-203ENST00000549490 HOXA7P31268 230 aaPredicted RBP11.13□□□□□ -0.63
UBE2N-203ENST00000549490 BTDP43251 543 aa11.13□□□□□ -0.63
UBE2N-203ENST00000549490 RHBDL3P58872 404 aa11.13□□□□□ -0.63
UBE2N-203ENST00000549490 RTP1P59025 263 aa11.13□□□□□ -0.63
UBE2N-203ENST00000549490 HERVK_113P62684 666 aa11.13□□□□□ -0.63
UBE2N-203ENST00000549490 GPR142Q7Z601 462 aa11.13□□□□□ -0.63
UBE2N-203ENST00000549490 PHIPQ8WWQ0 1821 aa11.13□□□□□ -0.63
UBE2N-203ENST00000549490 PTPRFP10586 1907 aa11.13□□□□□ -0.63
UBE2N-203ENST00000549490 PLXNB2O15031 1838 aa11.12□□□□□ -0.63
UBE2N-203ENST00000549490 NPM3O75607 178 aaKnown RBP11.12□□□□□ -0.63
UBE2N-203ENST00000549490 PLA2G5P39877 138 aa11.12□□□□□ -0.63
UBE2N-203ENST00000549490 BACE1P56817 501 aa11.12□□□□□ -0.63
UBE2N-203ENST00000549490 ERVK-9P63128 1117 aa11.12□□□□□ -0.63
UBE2N-203ENST00000549490 ERVK-24P63145 666 aa11.12□□□□□ -0.63
UBE2N-203ENST00000549490 MTMR2Q13614 643 aa11.12□□□□□ -0.63
UBE2N-203ENST00000549490 ATP2B3Q16720 1220 aa11.12□□□□□ -0.63
UBE2N-203ENST00000549490 NCBP3Q53F19 620 aaKnown RBP11.12□□□□□ -0.63
UBE2N-203ENST00000549490 POTEEQ6S8J3 1075 aa11.12□□□□□ -0.63
UBE2N-203ENST00000549490 PLEKHH3Q7Z736 793 aa11.12□□□□□ -0.63
UBE2N-203ENST00000549490 DZIP1Q86YF9 867 aaKnown RBP11.12□□□□□ -0.63
UBE2N-203ENST00000549490 WDR63Q8IWG1 891 aa11.12□□□□□ -0.63
UBE2N-203ENST00000549490 CCAR1Q8IX12 1150 aaKnown RBP11.12□□□□□ -0.63
UBE2N-203ENST00000549490 SLF2Q8IX21 1173 aa11.12□□□□□ -0.63
UBE2N-203ENST00000549490 ZGPATQ8N5A5 531 aaKnown RBP11.12□□□□□ -0.63
UBE2N-203ENST00000549490 USP38Q8NB14 1042 aa11.12□□□□□ -0.63
UBE2N-203ENST00000549490 APBA2Q99767 749 aa11.12□□□□□ -0.63
UBE2N-203ENST00000549490 WDR18Q9BV38 432 aa11.12□□□□□ -0.63
UBE2N-203ENST00000549490 DDX20Q9UHI6 824 aaKnown RBP11.12□□□□□ -0.63
UBE2N-203ENST00000549490 ATP11BQ9Y2G3 1177 aa11.12□□□□□ -0.63
UBE2N-203ENST00000549490 DOCK1Q14185 1865 aa11.12□□□□□ -0.63
UBE2N-203ENST00000549490 BDP1A6H8Y1 2624 aa11.11□□□□□ -0.63
UBE2N-203ENST00000549490 GPR75-ASB3A0A0A6YYF3 556 aa11.11□□□□□ -0.63
UBE2N-203ENST00000549490 DNM1LO00429 736 aa11.11□□□□□ -0.63
UBE2N-203ENST00000549490 MAP2K5Q13163 448 aa11.11□□□□□ -0.63
UBE2N-203ENST00000549490 MFSD14CQ5VZR4 134 aa11.11□□□□□ -0.63
UBE2N-203ENST00000549490 LPAR1Q92633 364 aa11.11□□□□□ -0.63
UBE2N-203ENST00000549490 BADQ92934 168 aa11.11□□□□□ -0.63
UBE2N-203ENST00000549490 USP44Q9H0E7 712 aa11.11□□□□□ -0.63
UBE2N-203ENST00000549490 AS3MTQ9HBK9 375 aa11.11□□□□□ -0.63
UBE2N-203ENST00000549490 TMOD4Q9NZQ9 345 aa11.11□□□□□ -0.63
UBE2N-203ENST00000549490 FLRT1Q9NZU1 646 aa11.11□□□□□ -0.63
UBE2N-203ENST00000549490 ABCF2Q9UG63 623 aa11.11□□□□□ -0.63
UBE2N-203ENST00000549490 DOCK2Q92608 1830 aa11.11□□□□□ -0.63
UBE2N-203ENST00000549490 MROH7-TTC4A0A0A0MT08 1334 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms