RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.87□□□□□ -0.19
BEST3-209ENST00000548658 IL1RAPL2Q9NP60 686 aa13.87□□□□□ -0.19
BEST3-209ENST00000548658 DOCK2Q92608 1830 aa13.86□□□□□ -0.19
BEST3-209ENST00000548658 PDHXO00330 501 aa13.86□□□□□ -0.19
BEST3-209ENST00000548658 CYP7A1P22680 504 aa13.86□□□□□ -0.19
BEST3-209ENST00000548658 SIRT2Q8IXJ6 389 aa13.86□□□□□ -0.19
BEST3-209ENST00000548658 TGFBRAP1Q8WUH2 860 aa13.86□□□□□ -0.19
BEST3-209ENST00000548658 PIH1D3Q9NQM4 214 aaKnown RBP13.86□□□□□ -0.19
BEST3-209ENST00000548658 PTPN22Q9Y2R2 807 aa13.86□□□□□ -0.19
BEST3-209ENST00000548658 AFG3L2Q9Y4W6 797 aa13.86□□□□□ -0.19
BEST3-209ENST00000548658 A0A0G2JLL6 359 aaPredicted RBP13.85□□□□□ -0.19
BEST3-209ENST00000548658 PRRT2Q7Z6L0 340 aaPredicted RBP13.85□□□□□ -0.19
BEST3-209ENST00000548658 MAGEB6Q8N7X4 407 aa13.85□□□□□ -0.19
BEST3-209ENST00000548658 PARK7Q99497 189 aaKnown RBP13.85□□□□□ -0.19
BEST3-209ENST00000548658 TRIM34Q9BYJ4 488 aa13.85□□□□□ -0.19
BEST3-209ENST00000548658 SLC45A1Q9Y2W3 748 aa13.85□□□□□ -0.19
BEST3-209ENST00000548658 APBB1O00213 710 aa13.84□□□□□ -0.19
BEST3-209ENST00000548658 HLA-DOAP06340 250 aa13.84□□□□□ -0.19
BEST3-209ENST00000548658 CAP2P40123 477 aa13.84□□□□□ -0.19
BEST3-209ENST00000548658 PRMT2P55345 433 aa13.84□□□□□ -0.19
BEST3-209ENST00000548658 LACTBP83111 547 aaPredicted RBP13.84□□□□□ -0.19
BEST3-209ENST00000548658 C17orf99Q6UX52 265 aa13.84□□□□□ -0.19
BEST3-209ENST00000548658 ADGRA1Q86SQ6 560 aa13.84□□□□□ -0.19
BEST3-209ENST00000548658 NBPF11Q86T75 865 aa13.84□□□□□ -0.19
BEST3-209ENST00000548658 CRACR2BQ8N4Y2 399 aaPredicted RBP13.84□□□□□ -0.19
BEST3-209ENST00000548658 GINM1Q9NU53 330 aa13.84□□□□□ -0.19
BEST3-209ENST00000548658 FLT1P17948 1338 aa13.84□□□□□ -0.19
BEST3-209ENST00000548658 HOXD10P28358 340 aa13.83□□□□□ -0.2
BEST3-209ENST00000548658 SOX10P56693 466 aa13.83□□□□□ -0.2
BEST3-209ENST00000548658 MOGSQ13724 837 aa13.83□□□□□ -0.2
BEST3-209ENST00000548658 C20orf194Q5TEA3 1177 aa13.83□□□□□ -0.2
BEST3-209ENST00000548658 METTL16Q86W50 562 aaKnown RBP13.83□□□□□ -0.2
BEST3-209ENST00000548658 MAPKAPK5Q8IW41 473 aa13.83□□□□□ -0.2
BEST3-209ENST00000548658 LRRCC1Q9C099 1032 aa13.83□□□□□ -0.2
BEST3-209ENST00000548658 ANTXR1Q9H6X2 564 aa13.83□□□□□ -0.2
BEST3-209ENST00000548658 AS3MTQ9HBK9 375 aa13.83□□□□□ -0.2
BEST3-209ENST00000548658 MAST2Q6P0Q8 1798 aa13.83□□□□□ -0.2
BEST3-209ENST00000548658 TRIM75PA6NK02 468 aa13.82□□□□□ -0.2
BEST3-209ENST00000548658 USP17L5A8MUK1 530 aa13.82□□□□□ -0.2
BEST3-209ENST00000548658 ASNSP08243 561 aa13.82□□□□□ -0.2
BEST3-209ENST00000548658 USP5P45974 858 aa13.82□□□□□ -0.2
BEST3-209ENST00000548658 SLC9C2Q5TAH2 1124 aa13.82□□□□□ -0.2
BEST3-209ENST00000548658 GPAT2Q6NUI2 795 aa13.82□□□□□ -0.2
BEST3-209ENST00000548658 PROCA1Q8NCQ7 364 aaPredicted RBP13.82□□□□□ -0.2
BEST3-209ENST00000548658 ZNF280CQ8ND82 737 aa13.82□□□□□ -0.2
BEST3-209ENST00000548658 PALD1Q9ULE6 856 aa13.82□□□□□ -0.2
BEST3-209ENST00000548658 FAM196BA6NMK8 535 aa13.81□□□□□ -0.2
BEST3-209ENST00000548658 ATP5JP18859 108 aa13.81□□□□□ -0.2
BEST3-209ENST00000548658 SPP2Q13103 211 aa13.81□□□□□ -0.2
BEST3-209ENST00000548658 PABPC4Q13310 644 aaKnown RBP eCLIP13.81□□□□□ -0.2
BEST3-209ENST00000548658 GADL1Q6ZQY3 521 aa13.81□□□□□ -0.2
BEST3-209ENST00000548658 TTC6Q86TZ1 520 aa13.81□□□□□ -0.2
BEST3-209ENST00000548658 MIGA1Q8NAN2 632 aa13.81□□□□□ -0.2
BEST3-209ENST00000548658 ARMC5Q96C12 935 aa13.81□□□□□ -0.2
BEST3-209ENST00000548658 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.81□□□□□ -0.2
BEST3-209ENST00000548658 CPA4Q9UI42 421 aa13.81□□□□□ -0.2
BEST3-209ENST00000548658 PNMA3Q9UL41 463 aa13.81□□□□□ -0.2
BEST3-209ENST00000548658 NDUFB9Q9Y6M9 179 aa13.81□□□□□ -0.2
BEST3-209ENST00000548658 DOCK1Q14185 1865 aa13.8□□□□□ -0.2
BEST3-209ENST00000548658 MAGEB6P1A0A0J9YX57 407 aa13.8□□□□□ -0.2
BEST3-209ENST00000548658 GOLIM4O00461 696 aa13.8□□□□□ -0.2
BEST3-209ENST00000548658 SLURP2P0DP57 97 aa13.8□□□□□ -0.2
BEST3-209ENST00000548658 DYNLL1P63167 89 aaKnown RBP13.8□□□□□ -0.2
BEST3-209ENST00000548658 MKRN4PQ13434 485 aaPredicted RBP13.8□□□□□ -0.2
BEST3-209ENST00000548658 SLC9C1Q4G0N8 1177 aa13.8□□□□□ -0.2
BEST3-209ENST00000548658 SMCR8Q8TEV9 937 aaPredicted RBP13.8□□□□□ -0.2
BEST3-209ENST00000548658 DNAJC2Q99543 621 aaKnown RBP13.8□□□□□ -0.2
BEST3-209ENST00000548658 WDR18Q9BV38 432 aa13.8□□□□□ -0.2
BEST3-209ENST00000548658 BCL11AQ9H165 835 aa13.8□□□□□ -0.2
BEST3-209ENST00000548658 EHD4Q9H223 541 aa13.8□□□□□ -0.2
BEST3-209ENST00000548658 AGTPBP1Q9UPW5 1226 aa13.8□□□□□ -0.2
BEST3-209ENST00000548658 MYO5AQ9Y4I1 1855 aaKnown RBP13.79□□□□□ -0.2
BEST3-209ENST00000548658 C19orf81C9J6K1 198 aa13.79□□□□□ -0.2
BEST3-209ENST00000548658 FMNL1O95466 1100 aaPredicted RBP13.79□□□□□ -0.2
BEST3-209ENST00000548658 CYP2C8P10632 490 aa13.79□□□□□ -0.2
BEST3-209ENST00000548658 BCRP11274 1271 aa13.79□□□□□ -0.2
BEST3-209ENST00000548658 PDE6AP16499 860 aa13.79□□□□□ -0.2
BEST3-209ENST00000548658 PSMC4P43686 418 aa13.79□□□□□ -0.2
BEST3-209ENST00000548658 CRNKL1Q9BZJ0 848 aaKnown RBP13.79□□□□□ -0.2
BEST3-209ENST00000548658 DCTPP1Q9H773 170 aa13.79□□□□□ -0.2
BEST3-209ENST00000548658 PAG1Q9NWQ8 432 aa13.79□□□□□ -0.2
BEST3-209ENST00000548658 SERPINB13Q9UIV8 391 aa13.79□□□□□ -0.2
BEST3-209ENST00000548658 TAOK2Q9UL54 1235 aa13.79□□□□□ -0.2
BEST3-209ENST00000548658 ADGRA2Q96PE1 1338 aa13.79□□□□□ -0.2
BEST3-209ENST00000548658 OSBPP22059 807 aa13.78□□□□□ -0.2
BEST3-209ENST00000548658 FCGRTP55899 365 aa13.78□□□□□ -0.2
BEST3-209ENST00000548658 SH3D19Q5HYK7 790 aa13.78□□□□□ -0.2
BEST3-209ENST00000548658 ZSCAN25Q6NSZ9 544 aa13.78□□□□□ -0.2
BEST3-209ENST00000548658 GPATCH3Q96I76 525 aa13.78□□□□□ -0.2
BEST3-209ENST00000548658 HAUS7Q99871 368 aa13.78□□□□□ -0.2
BEST3-209ENST00000548658 RIOK1Q9BRS2 568 aaKnown RBP13.78□□□□□ -0.2
BEST3-209ENST00000548658 TMEM106CQ9BVX2 250 aa13.78□□□□□ -0.2
BEST3-209ENST00000548658 BOLA2Q9H3K6 86 aa13.78□□□□□ -0.2
BEST3-209ENST00000548658 SAP30BPQ9UHR5 308 aaKnown RBP13.78□□□□□ -0.2
BEST3-209ENST00000548658 POLR3DP05423 398 aaPredicted RBP13.77□□□□□ -0.21
BEST3-209ENST00000548658 GCLCP48506 637 aaPredicted RBP13.77□□□□□ -0.21
BEST3-209ENST00000548658 BACE1P56817 501 aa13.77□□□□□ -0.21
BEST3-209ENST00000548658 CAP1Q01518 475 aa13.77□□□□□ -0.21
BEST3-209ENST00000548658 RRP1BQ14684 758 aaKnown RBP13.77□□□□□ -0.21
BEST3-209ENST00000548658 FOCADQ5VW36 1801 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms