RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 INSM1Q01101 510 aaPredicted RBP6.33□□□□□ -1.4
PTCH1-216ENST00000548379 AKAP4Q5JQC9 854 aa6.33□□□□□ -1.4
PTCH1-216ENST00000548379 NUTM2GQ5VZR2 741 aa6.33□□□□□ -1.4
PTCH1-216ENST00000548379 ANKRD34AQ69YU3 496 aa6.33□□□□□ -1.4
PTCH1-216ENST00000548379 TAB3Q8N5C8 712 aaPredicted RBP6.33□□□□□ -1.4
PTCH1-216ENST00000548379 RNF214Q8ND24 703 aa6.33□□□□□ -1.4
PTCH1-216ENST00000548379 REV1Q9UBZ9 1251 aa6.33□□□□□ -1.4
PTCH1-216ENST00000548379 NEFMP07197 916 aa6.32□□□□□ -1.4
PTCH1-216ENST00000548379 GRK4P32298 578 aa6.32□□□□□ -1.4
PTCH1-216ENST00000548379 CAP2P40123 477 aa6.32□□□□□ -1.4
PTCH1-216ENST00000548379 CASP7P55210 303 aa6.32□□□□□ -1.4
PTCH1-216ENST00000548379 PDE4BQ07343 736 aa6.32□□□□□ -1.4
PTCH1-216ENST00000548379 LRRFIP1Q32MZ4 808 aaKnown RBP6.32□□□□□ -1.4
PTCH1-216ENST00000548379 PPM1JQ5JR12 505 aa6.32□□□□□ -1.4
PTCH1-216ENST00000548379 ALYREFQ86V81 257 aaKnown RBP6.32□□□□□ -1.4
PTCH1-216ENST00000548379 CKAP2LQ8IYA6 745 aa6.32□□□□□ -1.4
PTCH1-216ENST00000548379 AGGF1Q8N302 714 aaeCLIP6.32□□□□□ -1.4
PTCH1-216ENST00000548379 C19orf47Q8N9M1 422 aaKnown RBP6.32□□□□□ -1.4
PTCH1-216ENST00000548379 C2CD4AQ8NCU7 369 aaPredicted RBP6.32□□□□□ -1.4
PTCH1-216ENST00000548379 CPLX3Q8WVH0 158 aa6.32□□□□□ -1.4
PTCH1-216ENST00000548379 TMEM40Q8WWA1 233 aa6.32□□□□□ -1.4
PTCH1-216ENST00000548379 ANAPC16Q96DE5 110 aa6.32□□□□□ -1.4
PTCH1-216ENST00000548379 SCARF2Q96GP6 870 aaPredicted RBP6.32□□□□□ -1.4
PTCH1-216ENST00000548379 ATXN3LQ9H3M9 355 aa6.32□□□□□ -1.4
PTCH1-216ENST00000548379 ANTXR1Q9H6X2 564 aa6.32□□□□□ -1.4
PTCH1-216ENST00000548379 CSADQ9Y600 493 aa6.32□□□□□ -1.4
PTCH1-216ENST00000548379 SLC22A31A6NKX4 558 aa6.31□□□□□ -1.4
PTCH1-216ENST00000548379 C9orf172C9J069 976 aa6.31□□□□□ -1.4
PTCH1-216ENST00000548379 DRD2P14416 443 aa6.31□□□□□ -1.4
PTCH1-216ENST00000548379 PLCG1P19174 1290 aa6.31□□□□□ -1.4
PTCH1-216ENST00000548379 TNNI3KQ59H18 835 aa6.31□□□□□ -1.4
PTCH1-216ENST00000548379 CDCP2Q5VXM1 449 aa6.31□□□□□ -1.4
PTCH1-216ENST00000548379 ANKS3Q6ZW76 656 aa6.31□□□□□ -1.4
PTCH1-216ENST00000548379 ACSF2Q96CM8 615 aaPredicted RBP6.31□□□□□ -1.4
PTCH1-216ENST00000548379 CNNM2Q9H8M5 875 aa6.31□□□□□ -1.4
PTCH1-216ENST00000548379 AKTIPQ9H8T0 292 aa6.31□□□□□ -1.4
PTCH1-216ENST00000548379 GMIPQ9P107 970 aa6.31□□□□□ -1.4
PTCH1-216ENST00000548379 PRAMEF27A3QJZ7 478 aa6.3□□□□□ -1.4
PTCH1-216ENST00000548379 TNFRSF10CO14798 259 aa6.3□□□□□ -1.4
PTCH1-216ENST00000548379 SMAD7O15105 426 aaKnown RBP6.3□□□□□ -1.4
PTCH1-216ENST00000548379 ALX3O95076 343 aa6.3□□□□□ -1.4
PTCH1-216ENST00000548379 PGRP06401 933 aa6.3□□□□□ -1.4
PTCH1-216ENST00000548379 PREPP48147 710 aa6.3□□□□□ -1.4
PTCH1-216ENST00000548379 NRG1Q02297 640 aaPredicted RBP6.3□□□□□ -1.4
PTCH1-216ENST00000548379 RAB33AQ14088 237 aa6.3□□□□□ -1.4
PTCH1-216ENST00000548379 ADGRE1Q14246 886 aa6.3□□□□□ -1.4
PTCH1-216ENST00000548379 CCDC144BQ3MJ40 725 aa6.3□□□□□ -1.4
PTCH1-216ENST00000548379 INTS3Q68E01 1043 aaKnown RBP6.3□□□□□ -1.4
PTCH1-216ENST00000548379 OVOS1Q6IE37 1185 aa6.3□□□□□ -1.4
PTCH1-216ENST00000548379 MCATQ8IVS2 390 aaKnown RBP6.3□□□□□ -1.4
PTCH1-216ENST00000548379 MRPL41Q8IXM3 137 aaKnown RBP6.3□□□□□ -1.4
PTCH1-216ENST00000548379 ZNF507Q8TCN5 953 aa6.3□□□□□ -1.4
PTCH1-216ENST00000548379 MKL1Q969V6 931 aa6.3□□□□□ -1.4
PTCH1-216ENST00000548379 ATG4CQ96DT6 458 aa6.3□□□□□ -1.4
PTCH1-216ENST00000548379 FAM46AQ96IP4 442 aaKnown RBP6.3□□□□□ -1.4
PTCH1-216ENST00000548379 NACC1Q96RE7 527 aa6.3□□□□□ -1.4
PTCH1-216ENST00000548379 CRBNQ96SW2 442 aa6.3□□□□□ -1.4
PTCH1-216ENST00000548379 TM9SF2Q99805 663 aa6.3□□□□□ -1.4
PTCH1-216ENST00000548379 TJP2Q9UDY2 1190 aa6.3□□□□□ -1.4
PTCH1-216ENST00000548379 AP4E1Q9UPM8 1137 aa6.3□□□□□ -1.4
PTCH1-216ENST00000548379 ACTL7BQ9Y614 415 aa6.3□□□□□ -1.4
PTCH1-216ENST00000548379 NME1P15531 152 aaKnown RBP6.29□□□□□ -1.4
PTCH1-216ENST00000548379 NOS3P29474 1203 aa6.29□□□□□ -1.4
PTCH1-216ENST00000548379 MLECQ14165 292 aa6.29□□□□□ -1.4
PTCH1-216ENST00000548379 TTLL4Q14679 1199 aa6.29□□□□□ -1.4
PTCH1-216ENST00000548379 FDX2Q6P4F2 183 aa6.29□□□□□ -1.4
PTCH1-216ENST00000548379 UBE3DQ7Z6J8 389 aa6.29□□□□□ -1.4
PTCH1-216ENST00000548379 HID1Q8IV36 788 aa6.29□□□□□ -1.4
PTCH1-216ENST00000548379 SLFN12Q8IYM2 578 aa6.29□□□□□ -1.4
PTCH1-216ENST00000548379 C12orf50Q8NA57 414 aaPredicted RBP6.29□□□□□ -1.4
PTCH1-216ENST00000548379 PMFBP1Q8TBY8 1022 aa6.29□□□□□ -1.4
PTCH1-216ENST00000548379 HNRNPLLQ8WVV9 542 aaKnown RBP6.29□□□□□ -1.4
PTCH1-216ENST00000548379 UBL7Q96S82 380 aaPredicted RBP6.29□□□□□ -1.4
PTCH1-216ENST00000548379 CEP41Q9BYV8 373 aa6.29□□□□□ -1.4
PTCH1-216ENST00000548379 OSBPL2Q9H1P3 480 aa6.29□□□□□ -1.4
PTCH1-216ENST00000548379 ACSS3Q9H6R3 686 aa6.29□□□□□ -1.4
PTCH1-216ENST00000548379 FBRSQ9HAH7 460 aa6.29□□□□□ -1.4
PTCH1-216ENST00000548379 FAM105AQ9NUU6 356 aa6.29□□□□□ -1.4
PTCH1-216ENST00000548379 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.28□□□□□ -1.4
PTCH1-216ENST00000548379 CHURC1-FNTBB4DL54 471 aa6.28□□□□□ -1.4
PTCH1-216ENST00000548379 ACRP10323 421 aa6.28□□□□□ -1.4
PTCH1-216ENST00000548379 GUCY2CP25092 1073 aa6.28□□□□□ -1.4
PTCH1-216ENST00000548379 ETF1P62495 437 aaKnown RBP6.28□□□□□ -1.4
PTCH1-216ENST00000548379 SLBPQ14493 270 aaKnown RBP eCLIP6.28□□□□□ -1.4
PTCH1-216ENST00000548379 MBTPS1Q14703 1052 aa6.28□□□□□ -1.4
PTCH1-216ENST00000548379 FBXW10Q5XX13 1052 aa6.28□□□□□ -1.4
PTCH1-216ENST00000548379 SLC6A19Q695T7 634 aa6.28□□□□□ -1.4
PTCH1-216ENST00000548379 RUFY4Q6ZNE9 571 aa6.28□□□□□ -1.4
PTCH1-216ENST00000548379 NLRC3Q7RTR2 1065 aa6.28□□□□□ -1.4
PTCH1-216ENST00000548379 DZIP1LQ8IYY4 767 aaKnown RBP6.28□□□□□ -1.4
PTCH1-216ENST00000548379 KCT2Q8NC54 265 aa6.28□□□□□ -1.4
PTCH1-216ENST00000548379 WFDC12Q8WWY7 111 aa6.28□□□□□ -1.4
PTCH1-216ENST00000548379 ISL2Q96A47 359 aa6.28□□□□□ -1.4
PTCH1-216ENST00000548379 TMEM87BQ96K49 555 aa6.28□□□□□ -1.4
PTCH1-216ENST00000548379 TNKS2Q9H2K2 1166 aa6.28□□□□□ -1.4
PTCH1-216ENST00000548379 SIRPGQ9P1W8 387 aa6.28□□□□□ -1.4
PTCH1-216ENST00000548379 MSRB2Q9Y3D2 182 aa6.28□□□□□ -1.4
PTCH1-216ENST00000548379 SHROOM4Q9ULL8 1493 aa6.28□□□□□ -1.4
PTCH1-216ENST00000548379 A0A1W2PQH9 124 aa6.27□□□□□ -1.41
PTCH1-216ENST00000548379 APBA3O96018 575 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms