RNA–Protein interactions for RNA: ENST00000543530.1

ARHGEF17-205, Transcript of Rho guanine nucleotide exchange factor 17, humanhuman

TSL 2

Gene ARHGEF17, Length 970 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF17-205ENST00000543530 LHX8Q68G74 356 aa16.14■□□□□ 0.17
ARHGEF17-205ENST00000543530 POTEEQ6S8J3 1075 aa16.14■□□□□ 0.17
ARHGEF17-205ENST00000543530 WDR63Q8IWG1 891 aa16.14■□□□□ 0.17
ARHGEF17-205ENST00000543530 ZNF384Q8TF68 577 aa16.14■□□□□ 0.17
ARHGEF17-205ENST00000543530 LPIN2Q92539 896 aa16.14■□□□□ 0.17
ARHGEF17-205ENST00000543530 USP44Q9H0E7 712 aa16.14■□□□□ 0.17
ARHGEF17-205ENST00000543530 SALL1Q9NSC2 1324 aa16.14■□□□□ 0.17
ARHGEF17-205ENST00000543530 CDK5RAP2Q96SN8 1893 aa16.14■□□□□ 0.17
ARHGEF17-205ENST00000543530 PRKAR2AP13861 404 aaKnown RBP16.13■□□□□ 0.17
ARHGEF17-205ENST00000543530 NCBP3Q53F19 620 aaKnown RBP16.13■□□□□ 0.17
ARHGEF17-205ENST00000543530 FAM109BQ6ICB4 259 aaPredicted RBP16.13■□□□□ 0.17
ARHGEF17-205ENST00000543530 ZSCAN29Q8IWY8 852 aaPredicted RBP16.13■□□□□ 0.17
ARHGEF17-205ENST00000543530 ASCC2Q9H1I8 757 aaPredicted RBP16.13■□□□□ 0.17
ARHGEF17-205ENST00000543530 RLFQ13129 1914 aa16.12■□□□□ 0.17
ARHGEF17-205ENST00000543530 CCND3P30281 292 aaPredicted RBP16.12■□□□□ 0.17
ARHGEF17-205ENST00000543530 ADORA1P30542 326 aa16.12■□□□□ 0.17
ARHGEF17-205ENST00000543530 ZEB1P37275 1124 aaPredicted RBP16.12■□□□□ 0.17
ARHGEF17-205ENST00000543530 HMGCS2P54868 508 aa16.12■□□□□ 0.17
ARHGEF17-205ENST00000543530 RHBDL3P58872 404 aa16.12■□□□□ 0.17
ARHGEF17-205ENST00000543530 PICALMQ13492 652 aa16.12■□□□□ 0.17
ARHGEF17-205ENST00000543530 CCL14Q16627 93 aa16.12■□□□□ 0.17
ARHGEF17-205ENST00000543530 PROCA1Q8NCQ7 364 aaPredicted RBP16.12■□□□□ 0.17
ARHGEF17-205ENST00000543530 TXNRD2Q9NNW7 524 aa16.12■□□□□ 0.17
ARHGEF17-205ENST00000543530 MORF4L1Q9UBU8 362 aa16.12■□□□□ 0.17
ARHGEF17-205ENST00000543530 GCLCP48506 637 aaPredicted RBP16.11■□□□□ 0.17
ARHGEF17-205ENST00000543530 JAG1P78504 1218 aa16.11■□□□□ 0.17
ARHGEF17-205ENST00000543530 CACNB2Q08289 660 aaPredicted RBP16.11■□□□□ 0.17
ARHGEF17-205ENST00000543530 DNAH12Q6ZR08 3092 aa16.1■□□□□ 0.17
ARHGEF17-205ENST00000543530 PRUNE2Q8WUY3 3088 aa16.1■□□□□ 0.17
ARHGEF17-205ENST00000543530 USP6NLQ92738 828 aa16.1■□□□□ 0.17
ARHGEF17-205ENST00000543530 PNMA3Q9UL41 463 aa16.1■□□□□ 0.17
ARHGEF17-205ENST00000543530 TBC1D12O60347 775 aa16.09■□□□□ 0.17
ARHGEF17-205ENST00000543530 BTDP43251 543 aa16.09■□□□□ 0.17
ARHGEF17-205ENST00000543530 ATP2B3Q16720 1220 aa16.09■□□□□ 0.17
ARHGEF17-205ENST00000543530 SHROOM1Q2M3G4 852 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF17-205ENST00000543530 Q3C1V9 767 aa16.09■□□□□ 0.17
ARHGEF17-205ENST00000543530 SH3D19Q5HYK7 790 aa16.09■□□□□ 0.17
ARHGEF17-205ENST00000543530 MRPL50Q8N5N7 158 aaKnown RBP16.09■□□□□ 0.17
ARHGEF17-205ENST00000543530 ZNF280CQ8ND82 737 aa16.09■□□□□ 0.17
ARHGEF17-205ENST00000543530 FAM163AQ96GL9 167 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF17-205ENST00000543530 P2RX7Q99572 595 aaKnown RBP16.09■□□□□ 0.17
ARHGEF17-205ENST00000543530 CDX2Q99626 313 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF17-205ENST00000543530 PRDM6Q9NQX0 595 aa16.09■□□□□ 0.17
ARHGEF17-205ENST00000543530 SIL1Q9H173 461 aa16.08■□□□□ 0.16
ARHGEF17-205ENST00000543530 PORCNQ9H237 461 aa16.08■□□□□ 0.16
ARHGEF17-205ENST00000543530 DENND2AQ9ULE3 1009 aa16.08■□□□□ 0.16
ARHGEF17-205ENST00000543530 MYO5AQ9Y4I1 1855 aaKnown RBP16.08■□□□□ 0.16
ARHGEF17-205ENST00000543530 CAP2P40123 477 aa16.07■□□□□ 0.16
ARHGEF17-205ENST00000543530 RASGRF1Q13972 1273 aa16.07■□□□□ 0.16
ARHGEF17-205ENST00000543530 CCDC102BQ68D86 513 aa16.07■□□□□ 0.16
ARHGEF17-205ENST00000543530 OSBPL5Q9H0X9 879 aaPredicted RBP16.07■□□□□ 0.16
ARHGEF17-205ENST00000543530 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.07■□□□□ 0.16
ARHGEF17-205ENST00000543530 RBPJLQ9UBG7 517 aa16.07■□□□□ 0.16
ARHGEF17-205ENST00000543530 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.07■□□□□ 0.16
ARHGEF17-205ENST00000543530 FOCADQ5VW36 1801 aa16.06■□□□□ 0.16
ARHGEF17-205ENST00000543530 MROH7-TTC4A0A0A0MT08 1334 aa16.06■□□□□ 0.16
ARHGEF17-205ENST00000543530 GPR75-ASB3A0A0A6YYF3 556 aa16.06■□□□□ 0.16
ARHGEF17-205ENST00000543530 XRCC5P13010 732 aaKnown RBP16.06■□□□□ 0.16
ARHGEF17-205ENST00000543530 TTYH1Q9H313 450 aaPredicted RBP16.06■□□□□ 0.16
ARHGEF17-205ENST00000543530 FLRT1Q9NZU1 646 aa16.06■□□□□ 0.16
ARHGEF17-205ENST00000543530 SEMA3EO15041 775 aa16.05■□□□□ 0.16
ARHGEF17-205ENST00000543530 ZBTB22O15209 634 aa16.05■□□□□ 0.16
ARHGEF17-205ENST00000543530 MECOMQ03112 1051 aa16.05■□□□□ 0.16
ARHGEF17-205ENST00000543530 SHHQ15465 462 aa16.05■□□□□ 0.16
ARHGEF17-205ENST00000543530 C9orf50Q5SZB4 431 aa16.05■□□□□ 0.16
ARHGEF17-205ENST00000543530 MORN1Q5T089 497 aa16.05■□□□□ 0.16
ARHGEF17-205ENST00000543530 NUDT12Q9BQG2 462 aa16.05■□□□□ 0.16
ARHGEF17-205ENST00000543530 SEMA6BQ9H3T3 888 aa16.05■□□□□ 0.16
ARHGEF17-205ENST00000543530 ABCF2Q9UG63 623 aa16.05■□□□□ 0.16
ARHGEF17-205ENST00000543530 PA2G4Q9UQ80 394 aaKnown RBP16.05■□□□□ 0.16
ARHGEF17-205ENST00000543530 CDH23Q9H251 3354 aa16.04■□□□□ 0.16
ARHGEF17-205ENST00000543530 TIMM10P62072 90 aa16.04■□□□□ 0.16
ARHGEF17-205ENST00000543530 HERVK_113P62684 666 aa16.04■□□□□ 0.16
ARHGEF17-205ENST00000543530 MTMR2Q13614 643 aa16.04■□□□□ 0.16
ARHGEF17-205ENST00000543530 DZIP1Q86YF9 867 aaKnown RBP16.04■□□□□ 0.16
ARHGEF17-205ENST00000543530 MAFAQ8NHW3 353 aaPredicted RBP16.04■□□□□ 0.16
ARHGEF17-205ENST00000543530 MYLIPQ8WY64 445 aa16.04■□□□□ 0.16
ARHGEF17-205ENST00000543530 SENP6Q9GZR1 1112 aaPredicted RBP16.04■□□□□ 0.16
ARHGEF17-205ENST00000543530 GNL3LQ9NVN8 582 aaKnown RBP16.04■□□□□ 0.16
ARHGEF17-205ENST00000543530 RAPGEFL1Q9UHV5 662 aa16.04■□□□□ 0.16
ARHGEF17-205ENST00000543530 TTC28Q96AY4 2481 aa16.03■□□□□ 0.16
ARHGEF17-205ENST00000543530 USP17L5A8MUK1 530 aa16.03■□□□□ 0.16
ARHGEF17-205ENST00000543530 NPM3O75607 178 aaKnown RBP16.03■□□□□ 0.16
ARHGEF17-205ENST00000543530 CIAO1O76071 339 aa16.03■□□□□ 0.16
ARHGEF17-205ENST00000543530 ZKSCAN1P17029 563 aaPredicted RBP16.03■□□□□ 0.16
ARHGEF17-205ENST00000543530 HOXA7P31268 230 aaPredicted RBP16.03■□□□□ 0.16
ARHGEF17-205ENST00000543530 ATN1P54259 1190 aaPredicted RBP16.03■□□□□ 0.16
ARHGEF17-205ENST00000543530 ZNF697Q5TEC3 545 aa16.03■□□□□ 0.16
ARHGEF17-205ENST00000543530 GPR142Q7Z601 462 aa16.03■□□□□ 0.16
ARHGEF17-205ENST00000543530 DNAJC18Q9H819 358 aa16.03■□□□□ 0.16
ARHGEF17-205ENST00000543530 CEP126Q9P2H0 1117 aa16.03■□□□□ 0.16
ARHGEF17-205ENST00000543530 CNMDO75829 334 aa16.02■□□□□ 0.16
ARHGEF17-205ENST00000543530 PABPC4Q13310 644 aaKnown RBP eCLIP16.02■□□□□ 0.16
ARHGEF17-205ENST00000543530 PI16Q6UXB8 463 aa16.02■□□□□ 0.16
ARHGEF17-205ENST00000543530 GPRC5AQ8NFJ5 357 aa16.02■□□□□ 0.16
ARHGEF17-205ENST00000543530 SOCS4Q8WXH5 440 aa16.02■□□□□ 0.16
ARHGEF17-205ENST00000543530 WDR18Q9BV38 432 aa16.02■□□□□ 0.16
ARHGEF17-205ENST00000543530 NDUFB9Q9Y6M9 179 aa16.02■□□□□ 0.16
ARHGEF17-205ENST00000543530 BACE1P56817 501 aa16.01■□□□□ 0.15
ARHGEF17-205ENST00000543530 ERVK-9P63128 1117 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms