RNA–Protein interactions for RNA: ENST00000541354.5

SPOCK3-226, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2 BASIC

Gene SPOCK3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-226ENST00000541354 CALM3P0DP25 149 aa17.06■□□□□ 0.32
SPOCK3-226ENST00000541354 WASF1Q92558 559 aa17.06■□□□□ 0.32
SPOCK3-226ENST00000541354 CLSTN2Q9H4D0 955 aa17.06■□□□□ 0.32
SPOCK3-226ENST00000541354 CDK5RAP2Q96SN8 1893 aa17.06■□□□□ 0.32
SPOCK3-226ENST00000541354 ZBTB43O43298 467 aa17.06■□□□□ 0.32
SPOCK3-226ENST00000541354 DTNBO60941 627 aa17.06■□□□□ 0.32
SPOCK3-226ENST00000541354 SUPT20HQ8NEM7 779 aa17.06■□□□□ 0.32
SPOCK3-226ENST00000541354 USP25Q9UHP3 1055 aa17.06■□□□□ 0.32
SPOCK3-226ENST00000541354 RCOR1Q9UKL0 485 aa17.06■□□□□ 0.32
SPOCK3-226ENST00000541354 IFIT3O14879 490 aaKnown RBP17.06■□□□□ 0.32
SPOCK3-226ENST00000541354 DYNLL1P63167 89 aaKnown RBP17.06■□□□□ 0.32
SPOCK3-226ENST00000541354 CTDSPL2Q05D32 466 aa17.06■□□□□ 0.32
SPOCK3-226ENST00000541354 EZH2Q15910 746 aaKnown RBP17.06■□□□□ 0.32
SPOCK3-226ENST00000541354 FAM173BQ6P4H8 233 aa17.06■□□□□ 0.32
SPOCK3-226ENST00000541354 PGBD1Q96JS3 809 aa17.06■□□□□ 0.32
SPOCK3-226ENST00000541354 ZNF287Q9HBT7 754 aa17.06■□□□□ 0.32
SPOCK3-226ENST00000541354 SNED1Q8TER0 1413 aa17.05■□□□□ 0.32
SPOCK3-226ENST00000541354 CCDC69A6NI79 296 aa17.05■□□□□ 0.32
SPOCK3-226ENST00000541354 H3BQV1 296 aa17.05■□□□□ 0.32
SPOCK3-226ENST00000541354 METAP2P50579 478 aaKnown RBP eCLIP17.05■□□□□ 0.32
SPOCK3-226ENST00000541354 PDE4BQ07343 736 aa17.05■□□□□ 0.32
SPOCK3-226ENST00000541354 IFFO2Q5TF58 517 aa17.05■□□□□ 0.32
SPOCK3-226ENST00000541354 DPP8Q6V1X1 898 aaPredicted RBP17.05■□□□□ 0.32
SPOCK3-226ENST00000541354 C2CD5Q86YS7 1000 aa17.05■□□□□ 0.32
SPOCK3-226ENST00000541354 FAM200AQ8TCP9 573 aa17.05■□□□□ 0.32
SPOCK3-226ENST00000541354 ZC3H12CQ9C0D7 883 aaKnown RBP17.05■□□□□ 0.32
SPOCK3-226ENST00000541354 VPS33BQ9H267 617 aa17.05■□□□□ 0.32
SPOCK3-226ENST00000541354 CPLX1O14810 134 aa17.05■□□□□ 0.32
SPOCK3-226ENST00000541354 WTAPQ15007 396 aa17.05■□□□□ 0.32
SPOCK3-226ENST00000541354 PODNQ7Z5L7 613 aa17.05■□□□□ 0.32
SPOCK3-226ENST00000541354 MAP3K14Q99558 947 aa17.05■□□□□ 0.32
SPOCK3-226ENST00000541354 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.05■□□□□ 0.32
SPOCK3-226ENST00000541354 ZNF646O15015 1829 aaPredicted RBP17.04■□□□□ 0.32
SPOCK3-226ENST00000541354 BAZ2AQ9UIF9 1905 aaKnown RBP17.04■□□□□ 0.32
SPOCK3-226ENST00000541354 C6orf229H3BNL8 230 aa17.04■□□□□ 0.32
SPOCK3-226ENST00000541354 TPM3P06753 285 aa17.04■□□□□ 0.32
SPOCK3-226ENST00000541354 SEC23AQ15436 765 aa17.04■□□□□ 0.32
SPOCK3-226ENST00000541354 ANKS1AQ92625 1134 aa17.04■□□□□ 0.32
SPOCK3-226ENST00000541354 SLC12A7Q9Y666 1083 aa17.04■□□□□ 0.32
SPOCK3-226ENST00000541354 CAVIN2O95810 425 aa17.04■□□□□ 0.32
SPOCK3-226ENST00000541354 SDR42E1Q8WUS8 393 aa17.04■□□□□ 0.32
SPOCK3-226ENST00000541354 UBAC1Q9BSL1 405 aa17.04■□□□□ 0.32
SPOCK3-226ENST00000541354 TCP11L1Q9NUJ3 509 aa17.04■□□□□ 0.32
SPOCK3-226ENST00000541354 MRVI1Q9Y6F6 885 aa17.04■□□□□ 0.32
SPOCK3-226ENST00000541354 DDAH1O94760 285 aa17.03■□□□□ 0.32
SPOCK3-226ENST00000541354 IFNAR1P17181 557 aa17.03■□□□□ 0.32
SPOCK3-226ENST00000541354 HDLBPQ00341 1268 aaKnown RBP17.03■□□□□ 0.32
SPOCK3-226ENST00000541354 CHST3Q7LGC8 479 aa17.03■□□□□ 0.32
SPOCK3-226ENST00000541354 BRAPQ7Z569 592 aa17.03■□□□□ 0.32
SPOCK3-226ENST00000541354 IQCA1Q86XH1 822 aa17.03■□□□□ 0.32
SPOCK3-226ENST00000541354 AATFQ9NY61 560 aaKnown RBP eCLIP17.03■□□□□ 0.32
SPOCK3-226ENST00000541354 DACT1Q9NYF0 836 aa17.03■□□□□ 0.32
SPOCK3-226ENST00000541354 TFIP11Q9UBB9 837 aaKnown RBP17.03■□□□□ 0.32
SPOCK3-226ENST00000541354 TACC3Q9Y6A5 838 aa17.03■□□□□ 0.32
SPOCK3-226ENST00000541354 PSME4Q14997 1843 aa17.03■□□□□ 0.32
SPOCK3-226ENST00000541354 TYRO3Q06418 890 aa17.03■□□□□ 0.32
SPOCK3-226ENST00000541354 C12orf60Q5U649 245 aa17.03■□□□□ 0.32
SPOCK3-226ENST00000541354 ZNF396Q96N95 335 aaPredicted RBP17.03■□□□□ 0.32
SPOCK3-226ENST00000541354 RBM28Q9NW13 759 aaKnown RBP17.03■□□□□ 0.32
SPOCK3-226ENST00000541354 GOLGA6L4A6NEF3 574 aa17.02■□□□□ 0.32
SPOCK3-226ENST00000541354 PTMAP06454 111 aaKnown RBP17.02■□□□□ 0.32
SPOCK3-226ENST00000541354 EN1Q05925 392 aaPredicted RBP17.02■□□□□ 0.32
SPOCK3-226ENST00000541354 TNMDQ9H2S6 317 aa17.02■□□□□ 0.32
SPOCK3-226ENST00000541354 FDPSP14324 419 aaKnown RBP17.02■□□□□ 0.31
SPOCK3-226ENST00000541354 CCT2P78371 535 aaKnown RBP17.02■□□□□ 0.31
SPOCK3-226ENST00000541354 KIAA2012Q0VF49 1180 aa17.02■□□□□ 0.31
SPOCK3-226ENST00000541354 NFXL1Q6ZNB6 911 aa17.02■□□□□ 0.31
SPOCK3-226ENST00000541354 ZSCAN10Q96SZ4 725 aaPredicted RBP17.02■□□□□ 0.31
SPOCK3-226ENST00000541354 ECM29Q5VYK3 1845 aa17.02■□□□□ 0.31
SPOCK3-226ENST00000541354 GOLGA8AA7E2F4 631 aa17.01■□□□□ 0.31
SPOCK3-226ENST00000541354 USP17L12C9JPN9 530 aa17.01■□□□□ 0.31
SPOCK3-226ENST00000541354 USP17L21D6R901 530 aa17.01■□□□□ 0.31
SPOCK3-226ENST00000541354 MFSD14BQ5SR56 506 aa17.01■□□□□ 0.31
SPOCK3-226ENST00000541354 HHIPL2Q6UWX4 724 aa17.01■□□□□ 0.31
SPOCK3-226ENST00000541354 FAM177A1Q8N128 213 aaPredicted RBP17.01■□□□□ 0.31
SPOCK3-226ENST00000541354 PIBF1Q8WXW3 757 aa17.01■□□□□ 0.31
SPOCK3-226ENST00000541354 NTRK3Q16288 839 aa17.01■□□□□ 0.31
SPOCK3-226ENST00000541354 C7orf43Q8WVR3 580 aa17.01■□□□□ 0.31
SPOCK3-226ENST00000541354 ORC3Q9UBD5 711 aaPredicted RBP17.01■□□□□ 0.31
SPOCK3-226ENST00000541354 MYO3BQ8WXR4 1341 aa17.01■□□□□ 0.31
SPOCK3-226ENST00000541354 MINDY4BA8MYZ0 360 aa17■□□□□ 0.31
SPOCK3-226ENST00000541354 AP5Z1O43299 807 aa17■□□□□ 0.31
SPOCK3-226ENST00000541354 FMNL1O95466 1100 aaPredicted RBP17■□□□□ 0.31
SPOCK3-226ENST00000541354 FBXO18Q8NFZ0 1043 aa17■□□□□ 0.31
SPOCK3-226ENST00000541354 CTAGE5O15320 804 aa17■□□□□ 0.31
SPOCK3-226ENST00000541354 USP5P45974 858 aa17■□□□□ 0.31
SPOCK3-226ENST00000541354 DDX11Q96FC9 970 aa17■□□□□ 0.31
SPOCK3-226ENST00000541354 GPHNQ9NQX3 736 aaPredicted RBP17■□□□□ 0.31
SPOCK3-226ENST00000541354 SLX4Q8IY92 1834 aa17■□□□□ 0.31
SPOCK3-226ENST00000541354 NPM3O75607 178 aaKnown RBP17■□□□□ 0.31
SPOCK3-226ENST00000541354 C8orf76Q96K31 380 aa17■□□□□ 0.31
SPOCK3-226ENST00000541354 NCOA5Q9HCD5 579 aaKnown RBP17■□□□□ 0.31
SPOCK3-226ENST00000541354 SPTLC3Q9NUV7 552 aa17■□□□□ 0.31
SPOCK3-226ENST00000541354 STRIP1Q5VSL9 837 aa16.99■□□□□ 0.31
SPOCK3-226ENST00000541354 DGKHQ86XP1 1220 aa16.99■□□□□ 0.31
SPOCK3-226ENST00000541354 TNKSO95271 1327 aa16.99■□□□□ 0.31
SPOCK3-226ENST00000541354 NR1I2O75469 434 aa16.99■□□□□ 0.31
SPOCK3-226ENST00000541354 BTDP43251 543 aa16.99■□□□□ 0.31
SPOCK3-226ENST00000541354 RTN1Q16799 776 aa16.99■□□□□ 0.31
SPOCK3-226ENST00000541354 SOGA3Q5TF21 947 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms