RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 CHGBP05060 677 aa22.46■■□□□ 1.19
VPS33A-205ENST00000541169 APPP05067 770 aa22.46■■□□□ 1.19
VPS33A-205ENST00000541169 NOGQ13253 232 aa22.46■■□□□ 1.19
VPS33A-205ENST00000541169 NMIQ13287 307 aaPredicted RBP22.46■■□□□ 1.19
VPS33A-205ENST00000541169 SBK1Q52WX2 424 aa22.46■■□□□ 1.19
VPS33A-205ENST00000541169 SAP30BPQ9UHR5 308 aaKnown RBP22.46■■□□□ 1.19
VPS33A-205ENST00000541169 ZBTB48P10074 688 aaPredicted RBP22.45■■□□□ 1.18
VPS33A-205ENST00000541169 MAP2K2P36507 400 aa22.45■■□□□ 1.18
VPS33A-205ENST00000541169 NOL9Q5SY16 702 aaKnown RBP22.45■■□□□ 1.18
VPS33A-205ENST00000541169 CASC1Q6TDU7 716 aa22.45■■□□□ 1.18
VPS33A-205ENST00000541169 PAXIP1Q6ZW49 1069 aaPredicted RBP22.45■■□□□ 1.18
VPS33A-205ENST00000541169 FAM227BQ96M60 508 aa22.45■■□□□ 1.18
VPS33A-205ENST00000541169 ZNF287Q9HBT7 754 aa22.45■■□□□ 1.18
VPS33A-205ENST00000541169 SWAP70Q9UH65 585 aa22.45■■□□□ 1.18
VPS33A-205ENST00000541169 CCDC171Q6TFL3 1326 aa22.45■■□□□ 1.18
VPS33A-205ENST00000541169 A0A0D9SFI3 127 aa22.44■■□□□ 1.18
VPS33A-205ENST00000541169 PHF20L1A8MW92 1017 aa22.44■■□□□ 1.18
VPS33A-205ENST00000541169 PRKAB2O43741 272 aa22.44■■□□□ 1.18
VPS33A-205ENST00000541169 CWC27Q6UX04 472 aaKnown RBP22.44■■□□□ 1.18
VPS33A-205ENST00000541169 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.44■■□□□ 1.18
VPS33A-205ENST00000541169 MOB2Q70IA6 237 aa22.44■■□□□ 1.18
VPS33A-205ENST00000541169 DNAJC5GQ8N7S2 189 aa22.44■■□□□ 1.18
VPS33A-205ENST00000541169 CAPNS2Q96L46 248 aa22.44■■□□□ 1.18
VPS33A-205ENST00000541169 SEC62Q99442 399 aaKnown RBP22.44■■□□□ 1.18
VPS33A-205ENST00000541169 TBC1D2Q9BYX2 928 aa22.44■■□□□ 1.18
VPS33A-205ENST00000541169 ZMYM6O95789 1325 aa22.43■■□□□ 1.18
VPS33A-205ENST00000541169 WDR33Q9C0J8 1336 aaKnown RBP22.43■■□□□ 1.18
VPS33A-205ENST00000541169 SLC10A3P09131 477 aa22.43■■□□□ 1.18
VPS33A-205ENST00000541169 TDO2P48775 406 aa22.43■■□□□ 1.18
VPS33A-205ENST00000541169 ALX1Q15699 326 aa22.43■■□□□ 1.18
VPS33A-205ENST00000541169 C12orf60Q5U649 245 aa22.43■■□□□ 1.18
VPS33A-205ENST00000541169 IFNL3Q8IZI9 196 aa22.43■■□□□ 1.18
VPS33A-205ENST00000541169 NAPBQ9H115 298 aa22.43■■□□□ 1.18
VPS33A-205ENST00000541169 USP17L12C9JPN9 530 aa22.42■■□□□ 1.18
VPS33A-205ENST00000541169 USP17L21D6R901 530 aa22.42■■□□□ 1.18
VPS33A-205ENST00000541169 SLC3A2P08195 630 aaKnown RBP22.42■■□□□ 1.18
VPS33A-205ENST00000541169 CHMLP26374 656 aa22.42■■□□□ 1.18
VPS33A-205ENST00000541169 VGLL4Q14135 290 aa22.42■■□□□ 1.18
VPS33A-205ENST00000541169 CTR9Q6PD62 1173 aa22.42■■□□□ 1.18
VPS33A-205ENST00000541169 ERO1BQ86YB8 467 aa22.42■■□□□ 1.18
VPS33A-205ENST00000541169 SCYL3Q8IZE3 742 aa22.42■■□□□ 1.18
VPS33A-205ENST00000541169 PICK1Q9NRD5 415 aa22.42■■□□□ 1.18
VPS33A-205ENST00000541169 INHBEP58166 350 aa22.41■■□□□ 1.18
VPS33A-205ENST00000541169 HTRA3P83110 453 aa22.41■■□□□ 1.18
VPS33A-205ENST00000541169 TATDN1Q6P1N9 297 aa22.41■■□□□ 1.18
VPS33A-205ENST00000541169 OTOFQ9HC10 1997 aa22.41■■□□□ 1.18
VPS33A-205ENST00000541169 BAZ2AQ9UIF9 1905 aaKnown RBP22.4■■□□□ 1.18
VPS33A-205ENST00000541169 SPDYE5A6NIY4 337 aa22.4■■□□□ 1.18
VPS33A-205ENST00000541169 ASNSP08243 561 aa22.4■■□□□ 1.18
VPS33A-205ENST00000541169 CAP2P40123 477 aa22.4■■□□□ 1.18
VPS33A-205ENST00000541169 VEGFBP49765 207 aa22.4■■□□□ 1.18
VPS33A-205ENST00000541169 PLCD1P51178 756 aa22.4■■□□□ 1.18
VPS33A-205ENST00000541169 PPATQ06203 517 aa22.4■■□□□ 1.18
VPS33A-205ENST00000541169 GABPAQ06546 454 aa22.4■■□□□ 1.18
VPS33A-205ENST00000541169 CYP4F22Q6NT55 531 aa22.4■■□□□ 1.18
VPS33A-205ENST00000541169 RASAL3Q86YV0 1011 aa22.4■■□□□ 1.18
VPS33A-205ENST00000541169 SIPA1L1O43166 1804 aa22.39■■□□□ 1.17
VPS33A-205ENST00000541169 HSPD1P10809 573 aaKnown RBP22.39■■□□□ 1.17
VPS33A-205ENST00000541169 SPRYD7Q5W111 196 aa22.39■■□□□ 1.17
VPS33A-205ENST00000541169 ZKSCAN4Q969J2 545 aaPredicted RBP22.39■■□□□ 1.17
VPS33A-205ENST00000541169 CCDC17Q96LX7 622 aa22.39■■□□□ 1.17
VPS33A-205ENST00000541169 DSCC1Q9BVC3 393 aa22.39■■□□□ 1.17
VPS33A-205ENST00000541169 CTNNA3Q9UI47 895 aa22.39■■□□□ 1.17
VPS33A-205ENST00000541169 FZD1Q9UP38 647 aa22.39■■□□□ 1.17
VPS33A-205ENST00000541169 SNCAIPQ9Y6H5 919 aa22.39■■□□□ 1.17
VPS33A-205ENST00000541169 ROBO3Q96MS0 1386 aa22.38■■□□□ 1.17
VPS33A-205ENST00000541169 LAMB1P07942 1786 aa22.38■■□□□ 1.17
VPS33A-205ENST00000541169 FAM155AB1AL88 458 aaPredicted RBP22.38■■□□□ 1.17
VPS33A-205ENST00000541169 INPP5BP32019 993 aa22.38■■□□□ 1.17
VPS33A-205ENST00000541169 NT5C2P49902 561 aa22.38■■□□□ 1.17
VPS33A-205ENST00000541169 C16orf86Q6ZW13 317 aa22.38■■□□□ 1.17
VPS33A-205ENST00000541169 WNK4Q96J92 1243 aa22.38■■□□□ 1.17
VPS33A-205ENST00000541169 CLMNQ96JQ2 1002 aa22.38■■□□□ 1.17
VPS33A-205ENST00000541169 DOCK1Q14185 1865 aa22.37■■□□□ 1.17
VPS33A-205ENST00000541169 MANSC4A6NHS7 340 aaPredicted RBP22.37■■□□□ 1.17
VPS33A-205ENST00000541169 SREBF2Q12772 1141 aa22.37■■□□□ 1.17
VPS33A-205ENST00000541169 PPIL2Q13356 520 aa22.37■■□□□ 1.17
VPS33A-205ENST00000541169 CERKLQ49MI3 558 aaPredicted RBP22.37■■□□□ 1.17
VPS33A-205ENST00000541169 CCDC129Q6ZRS4 1044 aa22.37■■□□□ 1.17
VPS33A-205ENST00000541169 JMYQ8N9B5 988 aa22.37■■□□□ 1.17
VPS33A-205ENST00000541169 OPTNQ96CV9 577 aa22.37■■□□□ 1.17
VPS33A-205ENST00000541169 ELP3Q9H9T3 547 aa22.37■■□□□ 1.17
VPS33A-205ENST00000541169 EPB41L4AQ9HCS5 686 aaPredicted RBP22.37■■□□□ 1.17
VPS33A-205ENST00000541169 CABP5Q9NP86 173 aa22.37■■□□□ 1.17
VPS33A-205ENST00000541169 THSD7BQ9C0I4 1608 aa22.37■■□□□ 1.17
VPS33A-205ENST00000541169 CDC45O75419 566 aa22.36■■□□□ 1.17
VPS33A-205ENST00000541169 PCP11498 1178 aaKnown RBP22.36■■□□□ 1.17
VPS33A-205ENST00000541169 GTF2A2P52657 109 aa22.36■■□□□ 1.17
VPS33A-205ENST00000541169 MAP2K1Q02750 393 aaPredicted RBP22.36■■□□□ 1.17
VPS33A-205ENST00000541169 PDE4BQ07343 736 aa22.36■■□□□ 1.17
VPS33A-205ENST00000541169 ZNF589Q86UQ0 364 aaPredicted RBP22.36■■□□□ 1.17
VPS33A-205ENST00000541169 DNAJC18Q9H819 358 aa22.36■■□□□ 1.17
VPS33A-205ENST00000541169 AS3MTQ9HBK9 375 aa22.36■■□□□ 1.17
VPS33A-205ENST00000541169 ANAPC4Q9UJX5 808 aa22.36■■□□□ 1.17
VPS33A-205ENST00000541169 MINDY4BA8MYZ0 360 aa22.35■■□□□ 1.17
VPS33A-205ENST00000541169 SGSM2O43147 1006 aa22.35■■□□□ 1.17
VPS33A-205ENST00000541169 PTPRAP18433 802 aa22.35■■□□□ 1.17
VPS33A-205ENST00000541169 KIAA1211Q6ZU35 1233 aa22.35■■□□□ 1.17
VPS33A-205ENST00000541169 USP17L5A8MUK1 530 aa22.34■■□□□ 1.17
VPS33A-205ENST00000541169 CXCL11O14625 94 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms