RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 ARMC2Q8NEN0 867 aa10.8□□□□□ -0.68
CTNNA1-243ENST00000540387 CCDC26Q8TAB7 109 aa10.8□□□□□ -0.68
CTNNA1-243ENST00000540387 ZBTB3Q9H5J0 574 aa10.8□□□□□ -0.68
CTNNA1-243ENST00000540387 IRAK4Q9NWZ3 460 aa10.8□□□□□ -0.68
CTNNA1-243ENST00000540387 PPP2R2CQ9Y2T4 447 aa10.8□□□□□ -0.68
CTNNA1-243ENST00000540387 CAND2O75155 1236 aa10.79□□□□□ -0.68
CTNNA1-243ENST00000540387 HMMRO75330 724 aa10.79□□□□□ -0.68
CTNNA1-243ENST00000540387 IPO7O95373 1038 aaKnown RBP10.79□□□□□ -0.68
CTNNA1-243ENST00000540387 SYF2O95926 243 aaKnown RBP10.79□□□□□ -0.68
CTNNA1-243ENST00000540387 MYBL2P10244 700 aa10.79□□□□□ -0.68
CTNNA1-243ENST00000540387 ARID4AP29374 1257 aaPredicted RBP10.79□□□□□ -0.68
CTNNA1-243ENST00000540387 CWF19L2Q2TBE0 894 aaKnown RBP10.79□□□□□ -0.68
CTNNA1-243ENST00000540387 AMOTL1Q8IY63 956 aa10.79□□□□□ -0.68
CTNNA1-243ENST00000540387 BAG1Q99933 345 aaPredicted RBP10.79□□□□□ -0.68
CTNNA1-243ENST00000540387 NAT10Q9H0A0 1025 aaKnown RBP10.79□□□□□ -0.68
CTNNA1-243ENST00000540387 NUCKS1Q9H1E3 243 aaKnown RBP10.79□□□□□ -0.68
CTNNA1-243ENST00000540387 CCDC87Q9NVE4 849 aa10.79□□□□□ -0.68
CTNNA1-243ENST00000540387 WDHD1O75717 1129 aaPredicted RBP10.79□□□□□ -0.68
CTNNA1-243ENST00000540387 IBSPP21815 317 aaPredicted RBP10.79□□□□□ -0.68
CTNNA1-243ENST00000540387 SMIM5Q71RC9 77 aa10.79□□□□□ -0.68
CTNNA1-243ENST00000540387 FCHSD1Q86WN1 690 aa10.79□□□□□ -0.68
CTNNA1-243ENST00000540387 PLBD2Q8NHP8 589 aa10.79□□□□□ -0.68
CTNNA1-243ENST00000540387 USP44Q9H0E7 712 aa10.79□□□□□ -0.68
CTNNA1-243ENST00000540387 LRRC4BQ9NT99 713 aa10.79□□□□□ -0.68
CTNNA1-243ENST00000540387 SPATS2LQ9NUQ6 558 aaKnown RBP10.79□□□□□ -0.68
CTNNA1-243ENST00000540387 CACNA1FO60840 1977 aa10.78□□□□□ -0.68
CTNNA1-243ENST00000540387 FRMD3A2A2Y4 597 aa10.78□□□□□ -0.68
CTNNA1-243ENST00000540387 CUTAO60888 179 aa10.78□□□□□ -0.68
CTNNA1-243ENST00000540387 IGKV5-2P06315 115 aa10.78□□□□□ -0.68
CTNNA1-243ENST00000540387 PDCP20941 246 aa10.78□□□□□ -0.68
CTNNA1-243ENST00000540387 IL6STP40189 918 aaPredicted RBP10.78□□□□□ -0.68
CTNNA1-243ENST00000540387 CLNS1AP54105 237 aaKnown RBP10.78□□□□□ -0.68
CTNNA1-243ENST00000540387 VSNL1P62760 191 aa10.78□□□□□ -0.68
CTNNA1-243ENST00000540387 MYD88Q99836 296 aa10.78□□□□□ -0.68
CTNNA1-243ENST00000540387 METTL22Q9BUU2 404 aaPredicted RBP10.78□□□□□ -0.68
CTNNA1-243ENST00000540387 PUF60Q9UHX1 559 aaKnown RBP10.78□□□□□ -0.68
CTNNA1-243ENST00000540387 TBC1D2BQ9UPU7 963 aa10.78□□□□□ -0.68
CTNNA1-243ENST00000540387 RPS6KL1Q9Y6S9 549 aa10.78□□□□□ -0.68
CTNNA1-243ENST00000540387 CDHR2Q9BYE9 1310 aa10.78□□□□□ -0.68
CTNNA1-243ENST00000540387 A0A1B0GUA9 196 aa10.78□□□□□ -0.68
CTNNA1-243ENST00000540387 ATP5J2-PTCD1G3V325 749 aa10.78□□□□□ -0.68
CTNNA1-243ENST00000540387 ANKRD18AQ8IVF6 992 aa10.78□□□□□ -0.68
CTNNA1-243ENST00000540387 ZNF513Q8N8E2 541 aaPredicted RBP10.78□□□□□ -0.68
CTNNA1-243ENST00000540387 CEP112Q8N8E3 955 aa10.78□□□□□ -0.68
CTNNA1-243ENST00000540387 ERCC4Q92889 916 aaPredicted RBP10.78□□□□□ -0.68
CTNNA1-243ENST00000540387 THOC1Q96FV9 657 aaKnown RBP10.78□□□□□ -0.68
CTNNA1-243ENST00000540387 LSG1Q9H089 658 aaKnown RBP10.78□□□□□ -0.68
CTNNA1-243ENST00000540387 KAT14Q9H8E8 782 aa10.78□□□□□ -0.68
CTNNA1-243ENST00000540387 NHSQ6T4R5 1651 aa10.78□□□□□ -0.68
CTNNA1-243ENST00000540387 BTAF1O14981 1849 aa10.77□□□□□ -0.68
CTNNA1-243ENST00000540387 AP1G2O75843 785 aa10.77□□□□□ -0.69
CTNNA1-243ENST00000540387 FSBPO95073 299 aa10.77□□□□□ -0.69
CTNNA1-243ENST00000540387 APBA3O96018 575 aa10.77□□□□□ -0.69
CTNNA1-243ENST00000540387 IRAK1P51617 712 aa10.77□□□□□ -0.69
CTNNA1-243ENST00000540387 RWDD2BP57060 319 aa10.77□□□□□ -0.69
CTNNA1-243ENST00000540387 PROM2Q8N271 834 aa10.77□□□□□ -0.69
CTNNA1-243ENST00000540387 IGSF22Q8N9C0 903 aa10.77□□□□□ -0.69
CTNNA1-243ENST00000540387 LINS1Q8NG48 757 aa10.77□□□□□ -0.69
CTNNA1-243ENST00000540387 CPSF2Q9P2I0 782 aaKnown RBP10.77□□□□□ -0.69
CTNNA1-243ENST00000540387 SKAP2O75563 359 aaPredicted RBP10.77□□□□□ -0.69
CTNNA1-243ENST00000540387 NBPF7P0C2Y1 421 aaPredicted RBP10.77□□□□□ -0.69
CTNNA1-243ENST00000540387 AARSP49588 968 aaKnown RBP eCLIP10.77□□□□□ -0.69
CTNNA1-243ENST00000540387 NEXNQ0ZGT2 675 aa10.77□□□□□ -0.69
CTNNA1-243ENST00000540387 BCAS4Q8TDM0 211 aa10.77□□□□□ -0.69
CTNNA1-243ENST00000540387 CCDC12Q8WUD4 166 aaPredicted RBP10.77□□□□□ -0.69
CTNNA1-243ENST00000540387 GBP3Q9H0R5 595 aa10.77□□□□□ -0.69
CTNNA1-243ENST00000540387 SBF2Q86WG5 1849 aa10.77□□□□□ -0.69
CTNNA1-243ENST00000540387 LAMB4A4D0S4 1761 aa10.76□□□□□ -0.69
CTNNA1-243ENST00000540387 GOLGA6L9A6NEM1 432 aa10.76□□□□□ -0.69
CTNNA1-243ENST00000540387 RHOXF2BP0C7M4 288 aa10.76□□□□□ -0.69
CTNNA1-243ENST00000540387 GCKP35557 465 aa10.76□□□□□ -0.69
CTNNA1-243ENST00000540387 ICA1Q05084 483 aa10.76□□□□□ -0.69
CTNNA1-243ENST00000540387 ACTN3Q08043 901 aaPredicted RBP10.76□□□□□ -0.69
CTNNA1-243ENST00000540387 GOLGA8FQ08AF8 430 aa10.76□□□□□ -0.69
CTNNA1-243ENST00000540387 GOLGA8DPQ0D2H9 430 aa10.76□□□□□ -0.69
CTNNA1-243ENST00000540387 HLFQ16534 295 aa10.76□□□□□ -0.69
CTNNA1-243ENST00000540387 NUTM1Q86Y26 1132 aa10.76□□□□□ -0.69
CTNNA1-243ENST00000540387 CCAR1Q8IX12 1150 aaKnown RBP10.76□□□□□ -0.69
CTNNA1-243ENST00000540387 RHOXF2Q9BQY4 288 aa10.76□□□□□ -0.69
CTNNA1-243ENST00000540387 EHD4Q9H223 541 aa10.76□□□□□ -0.69
CTNNA1-243ENST00000540387 GOLPH3LQ9H4A5 285 aa10.76□□□□□ -0.69
CTNNA1-243ENST00000540387 RABEP2Q9H5N1 569 aa10.76□□□□□ -0.69
CTNNA1-243ENST00000540387 SHTN1A0MZ66 631 aa10.76□□□□□ -0.69
CTNNA1-243ENST00000540387 NEURL1BA8MQ27 555 aa10.76□□□□□ -0.69
CTNNA1-243ENST00000540387 KIF6Q6ZMV9 814 aa10.76□□□□□ -0.69
CTNNA1-243ENST00000540387 DZIP3Q86Y13 1208 aaKnown RBP10.76□□□□□ -0.69
CTNNA1-243ENST00000540387 KIRREL3Q8IZU9 778 aa10.76□□□□□ -0.69
CTNNA1-243ENST00000540387 MICAL1Q8TDZ2 1067 aa10.76□□□□□ -0.69
CTNNA1-243ENST00000540387 JAKMIP1Q96N16 626 aaKnown RBP10.76□□□□□ -0.69
CTNNA1-243ENST00000540387 LRRCC1Q9C099 1032 aa10.76□□□□□ -0.69
CTNNA1-243ENST00000540387 KIF9Q9HAQ2 790 aa10.76□□□□□ -0.69
CTNNA1-243ENST00000540387 STAP2Q9UGK3 403 aa10.76□□□□□ -0.69
CTNNA1-243ENST00000540387 ARHGAP6O43182 974 aa10.75□□□□□ -0.69
CTNNA1-243ENST00000540387 ALDH1L1O75891 902 aa10.75□□□□□ -0.69
CTNNA1-243ENST00000540387 TRAF1Q13077 416 aa10.75□□□□□ -0.69
CTNNA1-243ENST00000540387 ADCK5Q3MIX3 580 aa10.75□□□□□ -0.69
CTNNA1-243ENST00000540387 KLC4Q9NSK0 619 aa10.75□□□□□ -0.69
CTNNA1-243ENST00000540387 C9orf78Q9NZ63 289 aaPredicted RBP10.75□□□□□ -0.69
CTNNA1-243ENST00000540387 TPCN1Q9ULQ1 816 aa10.75□□□□□ -0.69
CTNNA1-243ENST00000540387 TJP1Q07157 1748 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms