RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 CCL14Q16627 93 aa11.2□□□□□ -0.62
USF1-210ENST00000531842 PI16Q6UXB8 463 aa11.2□□□□□ -0.62
USF1-210ENST00000531842 TDHQ8IZJ6 230 aa11.2□□□□□ -0.62
USF1-210ENST00000531842 UBE2OQ9C0C9 1292 aaKnown RBP11.2□□□□□ -0.62
USF1-210ENST00000531842 ASCC2Q9H1I8 757 aaPredicted RBP11.2□□□□□ -0.62
USF1-210ENST00000531842 C11orf49Q9H6J7 331 aa11.2□□□□□ -0.62
USF1-210ENST00000531842 MAST2Q6P0Q8 1798 aa11.19□□□□□ -0.62
USF1-210ENST00000531842 CTNND1O60716 968 aaKnown RBP11.19□□□□□ -0.62
USF1-210ENST00000531842 ENTPD3O75355 529 aa11.19□□□□□ -0.62
USF1-210ENST00000531842 CCND3P30281 292 aaPredicted RBP11.19□□□□□ -0.62
USF1-210ENST00000531842 RHBDL3P58872 404 aa11.19□□□□□ -0.62
USF1-210ENST00000531842 TIMM10P62072 90 aa11.19□□□□□ -0.62
USF1-210ENST00000531842 MAP3K10Q02779 954 aa11.19□□□□□ -0.62
USF1-210ENST00000531842 FAM110CQ1W6H9 321 aa11.19□□□□□ -0.62
USF1-210ENST00000531842 LRRC26Q2I0M4 334 aa11.19□□□□□ -0.62
USF1-210ENST00000531842 CCDC102BQ68D86 513 aa11.19□□□□□ -0.62
USF1-210ENST00000531842 TBC1D9Q6ZT07 1266 aa11.19□□□□□ -0.62
USF1-210ENST00000531842 SSH1Q8WYL5 1049 aa11.19□□□□□ -0.62
USF1-210ENST00000531842 GUCD1Q96NT3 240 aa11.19□□□□□ -0.62
USF1-210ENST00000531842 NBPF3Q9H094 633 aa11.19□□□□□ -0.62
USF1-210ENST00000531842 TXNRD2Q9NNW7 524 aa11.19□□□□□ -0.62
USF1-210ENST00000531842 STXBP5LQ9Y2K9 1186 aa11.19□□□□□ -0.62
USF1-210ENST00000531842 SLC45A1Q9Y2W3 748 aa11.19□□□□□ -0.62
USF1-210ENST00000531842 NDUFB9Q9Y6M9 179 aa11.19□□□□□ -0.62
USF1-210ENST00000531842 RPTORQ8N122 1335 aa11.18□□□□□ -0.62
USF1-210ENST00000531842 SALL1Q9NSC2 1324 aa11.18□□□□□ -0.62
USF1-210ENST00000531842 PRKAR2AP13861 404 aaKnown RBP11.18□□□□□ -0.62
USF1-210ENST00000531842 MECOMQ03112 1051 aa11.18□□□□□ -0.62
USF1-210ENST00000531842 LRIT3Q3SXY7 679 aa11.18□□□□□ -0.62
USF1-210ENST00000531842 POTEEQ6S8J3 1075 aa11.18□□□□□ -0.62
USF1-210ENST00000531842 DZIP1Q86YF9 867 aaKnown RBP11.18□□□□□ -0.62
USF1-210ENST00000531842 FAM9BQ8IZU0 186 aa11.18□□□□□ -0.62
USF1-210ENST00000531842 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.18□□□□□ -0.62
USF1-210ENST00000531842 HMX1Q9NP08 348 aaPredicted RBP11.18□□□□□ -0.62
USF1-210ENST00000531842 LTBP2Q14767 1821 aa11.18□□□□□ -0.62
USF1-210ENST00000531842 MROH7-TTC4A0A0A0MT08 1334 aa11.17□□□□□ -0.62
USF1-210ENST00000531842 CACNB2Q08289 660 aaPredicted RBP11.17□□□□□ -0.62
USF1-210ENST00000531842 Q3C1V9 767 aa11.17□□□□□ -0.62
USF1-210ENST00000531842 P2RX7Q99572 595 aaKnown RBP11.17□□□□□ -0.62
USF1-210ENST00000531842 CEP126Q9P2H0 1117 aa11.17□□□□□ -0.62
USF1-210ENST00000531842 OGDHLQ9ULD0 1010 aa11.17□□□□□ -0.62
USF1-210ENST00000531842 DENND2AQ9ULE3 1009 aa11.17□□□□□ -0.62
USF1-210ENST00000531842 FOCADQ5VW36 1801 aa11.16□□□□□ -0.62
USF1-210ENST00000531842 MTMR2Q13614 643 aa11.16□□□□□ -0.62
USF1-210ENST00000531842 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.16□□□□□ -0.62
USF1-210ENST00000531842 ANKLE1Q8NAG6 615 aa11.16□□□□□ -0.62
USF1-210ENST00000531842 ZNF280CQ8ND82 737 aa11.16□□□□□ -0.62
USF1-210ENST00000531842 PORCNQ9H237 461 aa11.16□□□□□ -0.62
USF1-210ENST00000531842 GNL3LQ9NVN8 582 aaKnown RBP11.16□□□□□ -0.62
USF1-210ENST00000531842 TTC28Q96AY4 2481 aa11.16□□□□□ -0.62
USF1-210ENST00000531842 ANP32CO43423 234 aa11.15□□□□□ -0.62
USF1-210ENST00000531842 COL6A1P12109 1028 aa11.15□□□□□ -0.62
USF1-210ENST00000531842 ATN1P54259 1190 aaPredicted RBP11.15□□□□□ -0.62
USF1-210ENST00000531842 NCBP3Q53F19 620 aaKnown RBP11.15□□□□□ -0.62
USF1-210ENST00000531842 MAP3K21Q5TCX8 1036 aa11.15□□□□□ -0.62
USF1-210ENST00000531842 LHX8Q68G74 356 aa11.15□□□□□ -0.62
USF1-210ENST00000531842 PROCA1Q8NCQ7 364 aaPredicted RBP11.15□□□□□ -0.62
USF1-210ENST00000531842 PAGR1Q9BTK6 254 aa11.15□□□□□ -0.62
USF1-210ENST00000531842 PNMA3Q9UL41 463 aa11.15□□□□□ -0.62
USF1-210ENST00000531842 RLFQ13129 1914 aa11.15□□□□□ -0.62
USF1-210ENST00000531842 MYH1P12882 1939 aa11.14□□□□□ -0.63
USF1-210ENST00000531842 GPR75-ASB3A0A0A6YYF3 556 aa11.14□□□□□ -0.63
USF1-210ENST00000531842 GDF11O95390 407 aa11.14□□□□□ -0.63
USF1-210ENST00000531842 CAP2P40123 477 aa11.14□□□□□ -0.63
USF1-210ENST00000531842 TFCP2Q12800 502 aa11.14□□□□□ -0.63
USF1-210ENST00000531842 GPR153Q6NV75 609 aa11.14□□□□□ -0.63
USF1-210ENST00000531842 SH3RF3Q8TEJ3 882 aaPredicted RBP11.14□□□□□ -0.63
USF1-210ENST00000531842 XAGE2Q96GT9 111 aa11.14□□□□□ -0.63
USF1-210ENST00000531842 OSBPL5Q9H0X9 879 aaPredicted RBP11.14□□□□□ -0.63
USF1-210ENST00000531842 DNAJC18Q9H819 358 aa11.14□□□□□ -0.63
USF1-210ENST00000531842 FLRT1Q9NZU1 646 aa11.14□□□□□ -0.63
USF1-210ENST00000531842 RBPJLQ9UBG7 517 aa11.14□□□□□ -0.63
USF1-210ENST00000531842 MORF4L1Q9UBU8 362 aa11.14□□□□□ -0.63
USF1-210ENST00000531842 COL2A1P02458 1487 aaPredicted RBP11.13□□□□□ -0.63
USF1-210ENST00000531842 PTPRCP08575 1304 aa11.13□□□□□ -0.63
USF1-210ENST00000531842 ZNF521Q96K83 1311 aa11.13□□□□□ -0.63
USF1-210ENST00000531842 A0A1B0GUL7 405 aa11.13□□□□□ -0.63
USF1-210ENST00000531842 USP17L5A8MUK1 530 aa11.13□□□□□ -0.63
USF1-210ENST00000531842 POTEB2H3BUK9 544 aa11.13□□□□□ -0.63
USF1-210ENST00000531842 CIAO1O76071 339 aa11.13□□□□□ -0.63
USF1-210ENST00000531842 UBTFL1P0CB47 393 aaPredicted RBP11.13□□□□□ -0.63
USF1-210ENST00000531842 GCLCP48506 637 aaPredicted RBP11.13□□□□□ -0.63
USF1-210ENST00000531842 HERVK_113P62684 666 aa11.13□□□□□ -0.63
USF1-210ENST00000531842 MEIS3Q99687 375 aa11.13□□□□□ -0.63
USF1-210ENST00000531842 SENP6Q9GZR1 1112 aaPredicted RBP11.13□□□□□ -0.63
USF1-210ENST00000531842 HMG20BQ9P0W2 317 aa11.13□□□□□ -0.63
USF1-210ENST00000531842 SEMA3EO15041 775 aa11.12□□□□□ -0.63
USF1-210ENST00000531842 TBC1D12O60347 775 aa11.12□□□□□ -0.63
USF1-210ENST00000531842 ZKSCAN1P17029 563 aaPredicted RBP11.12□□□□□ -0.63
USF1-210ENST00000531842 IL15P40933 162 aaPredicted RBP11.12□□□□□ -0.63
USF1-210ENST00000531842 IRX3P78415 501 aaPredicted RBP11.12□□□□□ -0.63
USF1-210ENST00000531842 ZYXQ15942 572 aaKnown RBP11.12□□□□□ -0.63
USF1-210ENST00000531842 SH3D19Q5HYK7 790 aa11.12□□□□□ -0.63
USF1-210ENST00000531842 ERICH6Q7L0X2 663 aa11.12□□□□□ -0.63
USF1-210ENST00000531842 GPR142Q7Z601 462 aa11.12□□□□□ -0.63
USF1-210ENST00000531842 MAPKAPK5Q8IW41 473 aa11.12□□□□□ -0.63
USF1-210ENST00000531842 TEX11Q8IYF3 940 aa11.12□□□□□ -0.63
USF1-210ENST00000531842 USP6NLQ92738 828 aa11.12□□□□□ -0.63
USF1-210ENST00000531842 NSUN4Q96CB9 384 aaKnown RBP11.12□□□□□ -0.63
USF1-210ENST00000531842 FAM163AQ96GL9 167 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms