RNA–Protein interactions for RNA: ENST00000531336.1

SMPD1-206, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 2

Gene SMPD1, Length 650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-206ENST00000531336 RASSF10A6NK89 507 aa16.55■□□□□ 0.24
SMPD1-206ENST00000531336 PATL2C9JE40 543 aaKnown RBP16.55■□□□□ 0.24
SMPD1-206ENST00000531336 PLCD1P51178 756 aa16.55■□□□□ 0.24
SMPD1-206ENST00000531336 MFAP1P55081 439 aaKnown RBP16.55■□□□□ 0.24
SMPD1-206ENST00000531336 EVX2Q03828 476 aa16.55■□□□□ 0.24
SMPD1-206ENST00000531336 GRM1Q13255 1194 aa16.55■□□□□ 0.24
SMPD1-206ENST00000531336 VPS53Q5VIR6 699 aa16.55■□□□□ 0.24
SMPD1-206ENST00000531336 TTC6Q86TZ1 520 aa16.55■□□□□ 0.24
SMPD1-206ENST00000531336 KLRG1Q96E93 195 aa16.55■□□□□ 0.24
SMPD1-206ENST00000531336 CLMNQ96JQ2 1002 aa16.55■□□□□ 0.24
SMPD1-206ENST00000531336 LAMA4Q16363 1823 aa16.54■□□□□ 0.24
SMPD1-206ENST00000531336 RAD50Q92878 1312 aa16.54■□□□□ 0.24
SMPD1-206ENST00000531336 USP17L12C9JPN9 530 aa16.54■□□□□ 0.24
SMPD1-206ENST00000531336 USP17L21D6R901 530 aa16.54■□□□□ 0.24
SMPD1-206ENST00000531336 INPP5BP32019 993 aa16.54■□□□□ 0.24
SMPD1-206ENST00000531336 DEFB115Q30KQ5 88 aa16.54■□□□□ 0.24
SMPD1-206ENST00000531336 LDLRAD1Q5T700 205 aa16.54■□□□□ 0.24
SMPD1-206ENST00000531336 RGMBQ6NW40 437 aa16.54■□□□□ 0.24
SMPD1-206ENST00000531336 CTR9Q6PD62 1173 aa16.54■□□□□ 0.24
SMPD1-206ENST00000531336 ANKRD13AQ8IZ07 590 aa16.54■□□□□ 0.24
SMPD1-206ENST00000531336 RUFY2Q8WXA3 655 aa16.54■□□□□ 0.24
SMPD1-206ENST00000531336 NACAP1Q9BZK3 213 aa16.54■□□□□ 0.24
SMPD1-206ENST00000531336 NAPBQ9H115 298 aa16.54■□□□□ 0.24
SMPD1-206ENST00000531336 IL25Q9H293 177 aa16.54■□□□□ 0.24
SMPD1-206ENST00000531336 DNAJC18Q9H819 358 aa16.54■□□□□ 0.24
SMPD1-206ENST00000531336 ARPP21Q9UBL0 812 aaPredicted RBP16.54■□□□□ 0.24
SMPD1-206ENST00000531336 HERC5Q9UII4 1024 aaKnown RBP16.54■□□□□ 0.24
SMPD1-206ENST00000531336 CSADQ9Y600 493 aa16.54■□□□□ 0.24
SMPD1-206ENST00000531336 FOXP2O15409 715 aa16.53■□□□□ 0.24
SMPD1-206ENST00000531336 TBC1D12O60347 775 aa16.53■□□□□ 0.24
SMPD1-206ENST00000531336 ZNF157P51786 506 aaPredicted RBP16.53■□□□□ 0.24
SMPD1-206ENST00000531336 MAP3K9P80192 1104 aa16.53■□□□□ 0.24
SMPD1-206ENST00000531336 VGLL4Q14135 290 aa16.53■□□□□ 0.24
SMPD1-206ENST00000531336 CYP4F22Q6NT55 531 aa16.53■□□□□ 0.24
SMPD1-206ENST00000531336 GIMAP6Q6P9H5 292 aa16.53■□□□□ 0.24
SMPD1-206ENST00000531336 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.53■□□□□ 0.24
SMPD1-206ENST00000531336 IFNL3Q8IZI9 196 aa16.53■□□□□ 0.24
SMPD1-206ENST00000531336 ZKSCAN4Q969J2 545 aaPredicted RBP16.53■□□□□ 0.24
SMPD1-206ENST00000531336 HHIPL1Q96JK4 782 aa16.53■□□□□ 0.24
SMPD1-206ENST00000531336 EHD4Q9H223 541 aa16.53■□□□□ 0.24
SMPD1-206ENST00000531336 ELP3Q9H9T3 547 aa16.53■□□□□ 0.24
SMPD1-206ENST00000531336 SERPINB13Q9UIV8 391 aa16.53■□□□□ 0.24
SMPD1-206ENST00000531336 PHF20L1A8MW92 1017 aa16.52■□□□□ 0.24
SMPD1-206ENST00000531336 MINDY4BA8MYZ0 360 aa16.52■□□□□ 0.24
SMPD1-206ENST00000531336 SMIM22K7EJ46 135 aa16.52■□□□□ 0.24
SMPD1-206ENST00000531336 CDC45O75419 566 aa16.52■□□□□ 0.24
SMPD1-206ENST00000531336 HSPD1P10809 573 aaKnown RBP16.52■□□□□ 0.24
SMPD1-206ENST00000531336 MAP3K10Q02779 954 aa16.52■□□□□ 0.24
SMPD1-206ENST00000531336 C12orf60Q5U649 245 aa16.52■□□□□ 0.24
SMPD1-206ENST00000531336 RASAL3Q86YV0 1011 aa16.52■□□□□ 0.24
SMPD1-206ENST00000531336 FOXP4Q8IVH2 680 aaPredicted RBP16.52■□□□□ 0.24
SMPD1-206ENST00000531336 DYNLL2Q96FJ2 89 aa16.52■□□□□ 0.24
SMPD1-206ENST00000531336 CAPNS2Q96L46 248 aa16.52■□□□□ 0.24
SMPD1-206ENST00000531336 ZNF112Q9UJU3 913 aa16.52■□□□□ 0.24
SMPD1-206ENST00000531336 THSD7BQ9C0I4 1608 aa16.52■□□□□ 0.23
SMPD1-206ENST00000531336 MKRN3Q13064 507 aaKnown RBP16.51■□□□□ 0.23
SMPD1-206ENST00000531336 SBK1Q52WX2 424 aa16.51■□□□□ 0.23
SMPD1-206ENST00000531336 METTL16Q86W50 562 aaKnown RBP16.51■□□□□ 0.23
SMPD1-206ENST00000531336 STK11IPQ8N1F8 1099 aa16.51■□□□□ 0.23
SMPD1-206ENST00000531336 SLC44A5Q8NCS7 719 aa16.51■□□□□ 0.23
SMPD1-206ENST00000531336 SLC10A4Q96EP9 437 aa16.51■□□□□ 0.23
SMPD1-206ENST00000531336 SNCAIPQ9Y6H5 919 aa16.51■□□□□ 0.23
SMPD1-206ENST00000531336 PHIPQ8WWQ0 1821 aa16.5■□□□□ 0.23
SMPD1-206ENST00000531336 SLC10A3P09131 477 aa16.5■□□□□ 0.23
SMPD1-206ENST00000531336 ECE1P42892 770 aa16.5■□□□□ 0.23
SMPD1-206ENST00000531336 VEGFBP49765 207 aa16.5■□□□□ 0.23
SMPD1-206ENST00000531336 GABPAQ06546 454 aa16.5■□□□□ 0.23
SMPD1-206ENST00000531336 RRP1BQ14684 758 aaKnown RBP16.5■□□□□ 0.23
SMPD1-206ENST00000531336 CASC1Q6TDU7 716 aa16.5■□□□□ 0.23
SMPD1-206ENST00000531336 SCYL3Q8IZE3 742 aa16.5■□□□□ 0.23
SMPD1-206ENST00000531336 ROBO3Q96MS0 1386 aa16.5■□□□□ 0.23
SMPD1-206ENST00000531336 UNCXA6NJT0 531 aa16.49■□□□□ 0.23
SMPD1-206ENST00000531336 SGSM2O43147 1006 aa16.49■□□□□ 0.23
SMPD1-206ENST00000531336 GDF11O95390 407 aa16.49■□□□□ 0.23
SMPD1-206ENST00000531336 SHMT1P34896 483 aa16.49■□□□□ 0.23
SMPD1-206ENST00000531336 NOL9Q5SY16 702 aaKnown RBP16.49■□□□□ 0.23
SMPD1-206ENST00000531336 CNKSR2Q8WXI2 1034 aa16.49■□□□□ 0.23
SMPD1-206ENST00000531336 WNK4Q96J92 1243 aa16.49■□□□□ 0.23
SMPD1-206ENST00000531336 ESYT1Q9BSJ8 1104 aa16.49■□□□□ 0.23
SMPD1-206ENST00000531336 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.49■□□□□ 0.23
SMPD1-206ENST00000531336 WDR33Q9C0J8 1336 aaKnown RBP16.48■□□□□ 0.23
SMPD1-206ENST00000531336 FAM155AB1AL88 458 aaPredicted RBP16.48■□□□□ 0.23
SMPD1-206ENST00000531336 CTNND1O60716 968 aaKnown RBP16.48■□□□□ 0.23
SMPD1-206ENST00000531336 AOC2O75106 756 aa16.48■□□□□ 0.23
SMPD1-206ENST00000531336 FGAP02671 866 aa16.48■□□□□ 0.23
SMPD1-206ENST00000531336 CAP2P40123 477 aa16.48■□□□□ 0.23
SMPD1-206ENST00000531336 PPARAQ07869 468 aa16.48■□□□□ 0.23
SMPD1-206ENST00000531336 ALX1Q15699 326 aa16.48■□□□□ 0.23
SMPD1-206ENST00000531336 SHROOM1Q2M3G4 852 aaPredicted RBP16.48■□□□□ 0.23
SMPD1-206ENST00000531336 C16orf86Q6ZW13 317 aa16.48■□□□□ 0.23
SMPD1-206ENST00000531336 CCDC102AQ96A19 550 aa16.48■□□□□ 0.23
SMPD1-206ENST00000531336 OPTNQ96CV9 577 aa16.48■□□□□ 0.23
SMPD1-206ENST00000531336 OTUD5Q96G74 571 aa16.48■□□□□ 0.23
SMPD1-206ENST00000531336 DSCC1Q9BVC3 393 aa16.48■□□□□ 0.23
SMPD1-206ENST00000531336 PICK1Q9NRD5 415 aa16.48■□□□□ 0.23
SMPD1-206ENST00000531336 SWAP70Q9UH65 585 aa16.48■□□□□ 0.23
SMPD1-206ENST00000531336 ZMYM6O95789 1325 aa16.47■□□□□ 0.23
SMPD1-206ENST00000531336 SPDYE5A6NIY4 337 aa16.47■□□□□ 0.23
SMPD1-206ENST00000531336 GJA5P36382 358 aa16.47■□□□□ 0.23
SMPD1-206ENST00000531336 CDK8P49336 464 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms