RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 TBC1D25Q3MII6 688 aa9.2□□□□□ -0.94
CSDE1-214ENST00000530886 HSP90AB2PQ58FF8 381 aa9.2□□□□□ -0.94
CSDE1-214ENST00000530886 PPP1R42Q7Z4L9 355 aa9.2□□□□□ -0.94
CSDE1-214ENST00000530886 ELOA2Q8IYF1 753 aaPredicted RBP9.2□□□□□ -0.94
CSDE1-214ENST00000530886 C1orf131Q8NDD1 294 aaKnown RBP9.2□□□□□ -0.94
CSDE1-214ENST00000530886 RSRC1Q96IZ7 334 aaKnown RBP9.2□□□□□ -0.94
CSDE1-214ENST00000530886 CRACR2AQ9BSW2 395 aa9.2□□□□□ -0.94
CSDE1-214ENST00000530886 C19orf44Q9H6X5 657 aa9.2□□□□□ -0.94
CSDE1-214ENST00000530886 GOLGA6L7A0A1B0GV03 622 aa9.2□□□□□ -0.94
CSDE1-214ENST00000530886 TMEM232C9JQI7 657 aa9.2□□□□□ -0.94
CSDE1-214ENST00000530886 BIN1O00499 593 aa9.2□□□□□ -0.94
CSDE1-214ENST00000530886 YEATS4O95619 227 aa9.2□□□□□ -0.94
CSDE1-214ENST00000530886 CYB5D1Q6P9G0 228 aa9.2□□□□□ -0.94
CSDE1-214ENST00000530886 ANKRD23Q86SG2 305 aa9.2□□□□□ -0.94
CSDE1-214ENST00000530886 FUKQ8N0W3 1084 aa9.2□□□□□ -0.94
CSDE1-214ENST00000530886 NOA1Q8NC60 698 aaKnown RBP9.2□□□□□ -0.94
CSDE1-214ENST00000530886 AENQ8WTP8 325 aaKnown RBP9.2□□□□□ -0.94
CSDE1-214ENST00000530886 EPN3Q9H201 632 aa9.2□□□□□ -0.94
CSDE1-214ENST00000530886 KIF9Q9HAQ2 790 aa9.2□□□□□ -0.94
CSDE1-214ENST00000530886 RGPD8O14715 1765 aaPredicted RBP9.2□□□□□ -0.94
CSDE1-214ENST00000530886 FAM237AA0A1B0GTK4 181 aa9.19□□□□□ -0.94
CSDE1-214ENST00000530886 NDUFAB1O14561 156 aa9.19□□□□□ -0.94
CSDE1-214ENST00000530886 OPA1O60313 960 aa9.19□□□□□ -0.94
CSDE1-214ENST00000530886 CRELD2Q6UXH1 353 aaPredicted RBP9.19□□□□□ -0.94
CSDE1-214ENST00000530886 KCNG4Q8TDN1 519 aa9.19□□□□□ -0.94
CSDE1-214ENST00000530886 MYH13Q9UKX3 1938 aa9.19□□□□□ -0.94
CSDE1-214ENST00000530886 GOLGA6BA6NDN3 693 aa9.19□□□□□ -0.94
CSDE1-214ENST00000530886 MGRN1O60291 552 aa9.19□□□□□ -0.94
CSDE1-214ENST00000530886 ME1P48163 572 aa9.19□□□□□ -0.94
CSDE1-214ENST00000530886 KRT32Q14532 448 aa9.19□□□□□ -0.94
CSDE1-214ENST00000530886 KARSQ15046 597 aaKnown RBP9.19□□□□□ -0.94
CSDE1-214ENST00000530886 NBPF14Q5TI25 921 aa9.19□□□□□ -0.94
CSDE1-214ENST00000530886 LMBR1Q8WVP7 490 aa9.19□□□□□ -0.94
CSDE1-214ENST00000530886 P3H4Q92791 437 aa9.19□□□□□ -0.94
CSDE1-214ENST00000530886 MIS18AQ9NYP9 233 aa9.19□□□□□ -0.94
CSDE1-214ENST00000530886 ERICH2A1L162 156 aa9.19□□□□□ -0.94
CSDE1-214ENST00000530886 ZNF18P17022 549 aa9.19□□□□□ -0.94
CSDE1-214ENST00000530886 XRCC4Q13426 336 aa9.19□□□□□ -0.94
CSDE1-214ENST00000530886 LACTB2Q53H82 288 aaPredicted RBP9.19□□□□□ -0.94
CSDE1-214ENST00000530886 NAA35Q5VZE5 725 aa9.19□□□□□ -0.94
CSDE1-214ENST00000530886 CCNI2Q6ZMN8 369 aaPredicted RBP9.19□□□□□ -0.94
CSDE1-214ENST00000530886 KDM7AQ6ZMT4 941 aa9.19□□□□□ -0.94
CSDE1-214ENST00000530886 TRAPPC11Q7Z392 1133 aa9.19□□□□□ -0.94
CSDE1-214ENST00000530886 FAM227BQ96M60 508 aa9.19□□□□□ -0.94
CSDE1-214ENST00000530886 SELENOOQ9BVL4 669 aa9.19□□□□□ -0.94
CSDE1-214ENST00000530886 POLR3EQ9NVU0 708 aa9.19□□□□□ -0.94
CSDE1-214ENST00000530886 FANCLQ9NW38 375 aa9.19□□□□□ -0.94
CSDE1-214ENST00000530886 CORO1CQ9ULV4 474 aaPredicted RBP9.19□□□□□ -0.94
CSDE1-214ENST00000530886 BCL9LQ86UU0 1499 aa9.18□□□□□ -0.94
CSDE1-214ENST00000530886 MKRN4PQ13434 485 aaPredicted RBP9.18□□□□□ -0.94
CSDE1-214ENST00000530886 ALS2CLQ60I27 953 aa9.18□□□□□ -0.94
CSDE1-214ENST00000530886 LINC00301Q8NCQ3 95 aa9.18□□□□□ -0.94
CSDE1-214ENST00000530886 EVI5LQ96CN4 794 aa9.18□□□□□ -0.94
CSDE1-214ENST00000530886 IRX2Q9BZI1 471 aaPredicted RBP9.18□□□□□ -0.94
CSDE1-214ENST00000530886 EHD4Q9H223 541 aa9.18□□□□□ -0.94
CSDE1-214ENST00000530886 FOXO3O43524 673 aa9.18□□□□□ -0.94
CSDE1-214ENST00000530886 PPFIA3O75145 1194 aa9.18□□□□□ -0.94
CSDE1-214ENST00000530886 ALDH1L1O75891 902 aa9.18□□□□□ -0.94
CSDE1-214ENST00000530886 SMNDC1O75940 238 aaKnown RBP eCLIP9.18□□□□□ -0.94
CSDE1-214ENST00000530886 RTN3O95197 1032 aaPredicted RBP9.18□□□□□ -0.94
CSDE1-214ENST00000530886 GOLGA8FQ08AF8 430 aa9.18□□□□□ -0.94
CSDE1-214ENST00000530886 GOLGA8DPQ0D2H9 430 aa9.18□□□□□ -0.94
CSDE1-214ENST00000530886 ZNF569Q5MCW4 686 aa9.18□□□□□ -0.94
CSDE1-214ENST00000530886 MIS18BP1Q6P0N0 1132 aa9.18□□□□□ -0.94
CSDE1-214ENST00000530886 MFN1Q8IWA4 741 aa9.18□□□□□ -0.94
CSDE1-214ENST00000530886 DDX54Q8TDD1 881 aaKnown RBP9.18□□□□□ -0.94
CSDE1-214ENST00000530886 RIN2Q8WYP3 895 aaPredicted RBP9.18□□□□□ -0.94
CSDE1-214ENST00000530886 CCDC47Q96A33 483 aaKnown RBP9.18□□□□□ -0.94
CSDE1-214ENST00000530886 CCDC51Q96ER9 411 aa9.18□□□□□ -0.94
CSDE1-214ENST00000530886 FAM184BQ9ULE4 1060 aa9.18□□□□□ -0.94
CSDE1-214ENST00000530886 TPX2Q9ULW0 747 aaKnown RBP9.18□□□□□ -0.94
CSDE1-214ENST00000530886 SAMM50Q9Y512 469 aa9.18□□□□□ -0.94
CSDE1-214ENST00000530886 SLIT1O75093 1534 aa9.18□□□□□ -0.94
CSDE1-214ENST00000530886 A0A0D9SFI3 127 aa9.18□□□□□ -0.94
CSDE1-214ENST00000530886 CAND2O75155 1236 aa9.18□□□□□ -0.94
CSDE1-214ENST00000530886 CMA1P23946 247 aa9.18□□□□□ -0.94
CSDE1-214ENST00000530886 MAGEA8P43361 318 aa9.18□□□□□ -0.94
CSDE1-214ENST00000530886 HSP90AB4PQ58FF6 505 aa9.18□□□□□ -0.94
CSDE1-214ENST00000530886 SLC4A10Q6U841 1118 aa9.18□□□□□ -0.94
CSDE1-214ENST00000530886 SLC35F6Q8N357 371 aa9.18□□□□□ -0.94
CSDE1-214ENST00000530886 NSUN7Q8NE18 718 aaKnown RBP9.18□□□□□ -0.94
CSDE1-214ENST00000530886 PARD3BQ8TEW8 1205 aa9.18□□□□□ -0.94
CSDE1-214ENST00000530886 STK31Q9BXU1 1019 aa9.18□□□□□ -0.94
CSDE1-214ENST00000530886 IRAK4Q9NWZ3 460 aa9.18□□□□□ -0.94
CSDE1-214ENST00000530886 MAP3K19Q56UN5 1328 aa9.18□□□□□ -0.94
CSDE1-214ENST00000530886 AP1G2O75843 785 aa9.17□□□□□ -0.94
CSDE1-214ENST00000530886 NAA25Q14CX7 972 aa9.17□□□□□ -0.94
CSDE1-214ENST00000530886 MTHFSDQ2M296 383 aaKnown RBP9.17□□□□□ -0.94
CSDE1-214ENST00000530886 SULT6B1Q6IMI4 303 aa9.17□□□□□ -0.94
CSDE1-214ENST00000530886 APLFQ8IW19 511 aaPredicted RBP9.17□□□□□ -0.94
CSDE1-214ENST00000530886 ZNF473Q8WTR7 871 aaKnown RBP9.17□□□□□ -0.94
CSDE1-214ENST00000530886 SPDL1Q96EA4 605 aa9.17□□□□□ -0.94
CSDE1-214ENST00000530886 OSBPL9Q96SU4 736 aa9.17□□□□□ -0.94
CSDE1-214ENST00000530886 DESI2Q9BSY9 194 aa9.17□□□□□ -0.94
CSDE1-214ENST00000530886 RGPD2P0DJD1 1756 aa9.17□□□□□ -0.94
CSDE1-214ENST00000530886 MAP3K15Q6ZN16 1313 aa9.17□□□□□ -0.94
CSDE1-214ENST00000530886 AKR1B15C9JRZ8 316 aaPredicted RBP9.17□□□□□ -0.94
CSDE1-214ENST00000530886 RIPK1Q13546 671 aa9.17□□□□□ -0.94
CSDE1-214ENST00000530886 NR1I3Q14994 352 aa9.17□□□□□ -0.94
CSDE1-214ENST00000530886 RAD9BQ6WBX8 426 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms