RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 PI4KBQ9UBF8 816 aa13.28□□□□□ -0.28
PVT1-216ENST00000523068 PTPN22Q9Y2R2 807 aa13.28□□□□□ -0.28
PVT1-216ENST00000523068 AFG3L2Q9Y4W6 797 aa13.28□□□□□ -0.28
PVT1-216ENST00000523068 MGAMO43451 1857 aa13.27□□□□□ -0.28
PVT1-216ENST00000523068 A0A0G2JLL6 359 aaPredicted RBP13.27□□□□□ -0.29
PVT1-216ENST00000523068 GNRH1P01148 92 aa13.27□□□□□ -0.29
PVT1-216ENST00000523068 IFIT2P09913 472 aaKnown RBP13.27□□□□□ -0.29
PVT1-216ENST00000523068 CYP7A1P22680 504 aa13.27□□□□□ -0.29
PVT1-216ENST00000523068 PRRT2Q7Z6L0 340 aaPredicted RBP13.27□□□□□ -0.29
PVT1-216ENST00000523068 TGFBRAP1Q8WUH2 860 aa13.27□□□□□ -0.29
PVT1-216ENST00000523068 PARK7Q99497 189 aaKnown RBP13.27□□□□□ -0.29
PVT1-216ENST00000523068 IL1RAPL2Q9NP60 686 aa13.27□□□□□ -0.29
PVT1-216ENST00000523068 ZSWIM8A7E2V4 1837 aa13.26□□□□□ -0.29
PVT1-216ENST00000523068 LOC285556D6RIA3 1793 aa13.26□□□□□ -0.29
PVT1-216ENST00000523068 APBB1O00213 710 aa13.26□□□□□ -0.29
PVT1-216ENST00000523068 FLT1P17948 1338 aa13.26□□□□□ -0.29
PVT1-216ENST00000523068 LACTBP83111 547 aaPredicted RBP13.26□□□□□ -0.29
PVT1-216ENST00000523068 MOGSQ13724 837 aa13.26□□□□□ -0.29
PVT1-216ENST00000523068 C17orf99Q6UX52 265 aa13.26□□□□□ -0.29
PVT1-216ENST00000523068 ADGRA1Q86SQ6 560 aa13.26□□□□□ -0.29
PVT1-216ENST00000523068 SIRT2Q8IXJ6 389 aa13.26□□□□□ -0.29
PVT1-216ENST00000523068 MAGEB6Q8N7X4 407 aa13.26□□□□□ -0.29
PVT1-216ENST00000523068 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.26□□□□□ -0.29
PVT1-216ENST00000523068 TRIM34Q9BYJ4 488 aa13.26□□□□□ -0.29
PVT1-216ENST00000523068 SLC45A1Q9Y2W3 748 aa13.26□□□□□ -0.29
PVT1-216ENST00000523068 MYH7P12883 1935 aa13.25□□□□□ -0.29
PVT1-216ENST00000523068 TRIM75PA6NK02 468 aa13.25□□□□□ -0.29
PVT1-216ENST00000523068 FAM196BA6NMK8 535 aa13.25□□□□□ -0.29
PVT1-216ENST00000523068 HLA-DOAP06340 250 aa13.25□□□□□ -0.29
PVT1-216ENST00000523068 SLURP2P0DP57 97 aa13.25□□□□□ -0.29
PVT1-216ENST00000523068 CAP2P40123 477 aa13.25□□□□□ -0.29
PVT1-216ENST00000523068 GPAT2Q6NUI2 795 aa13.25□□□□□ -0.29
PVT1-216ENST00000523068 GADL1Q6ZQY3 521 aa13.25□□□□□ -0.29
PVT1-216ENST00000523068 NBPF11Q86T75 865 aa13.25□□□□□ -0.29
PVT1-216ENST00000523068 FOXP4Q8IVH2 680 aaPredicted RBP13.25□□□□□ -0.29
PVT1-216ENST00000523068 MAPKAPK5Q8IW41 473 aa13.25□□□□□ -0.29
PVT1-216ENST00000523068 CRACR2BQ8N4Y2 399 aaPredicted RBP13.25□□□□□ -0.29
PVT1-216ENST00000523068 PRMT2P55345 433 aa13.24□□□□□ -0.29
PVT1-216ENST00000523068 DYNLL1P63167 89 aaKnown RBP13.24□□□□□ -0.29
PVT1-216ENST00000523068 C20orf194Q5TEA3 1177 aa13.24□□□□□ -0.29
PVT1-216ENST00000523068 PROCA1Q8NCQ7 364 aaPredicted RBP13.24□□□□□ -0.29
PVT1-216ENST00000523068 ANTXR1Q9H6X2 564 aa13.24□□□□□ -0.29
PVT1-216ENST00000523068 AS3MTQ9HBK9 375 aa13.24□□□□□ -0.29
PVT1-216ENST00000523068 GINM1Q9NU53 330 aa13.24□□□□□ -0.29
PVT1-216ENST00000523068 CPA4Q9UI42 421 aa13.24□□□□□ -0.29
PVT1-216ENST00000523068 NDUFB9Q9Y6M9 179 aa13.24□□□□□ -0.29
PVT1-216ENST00000523068 NAV1Q8NEY1 1877 aa13.24□□□□□ -0.29
PVT1-216ENST00000523068 TNRC18O15417 2968 aaPredicted RBP13.23□□□□□ -0.29
PVT1-216ENST00000523068 ADGRA2Q96PE1 1338 aa13.23□□□□□ -0.29
PVT1-216ENST00000523068 USP17L5A8MUK1 530 aa13.23□□□□□ -0.29
PVT1-216ENST00000523068 ASNSP08243 561 aa13.23□□□□□ -0.29
PVT1-216ENST00000523068 HOXD10P28358 340 aa13.23□□□□□ -0.29
PVT1-216ENST00000523068 USP5P45974 858 aa13.23□□□□□ -0.29
PVT1-216ENST00000523068 CAP1Q01518 475 aa13.23□□□□□ -0.29
PVT1-216ENST00000523068 SLC9C1Q4G0N8 1177 aa13.23□□□□□ -0.29
PVT1-216ENST00000523068 METTL16Q86W50 562 aaKnown RBP13.23□□□□□ -0.29
PVT1-216ENST00000523068 MIGA1Q8NAN2 632 aa13.23□□□□□ -0.29
PVT1-216ENST00000523068 ZNF280CQ8ND82 737 aa13.23□□□□□ -0.29
PVT1-216ENST00000523068 ARMC5Q96C12 935 aa13.23□□□□□ -0.29
PVT1-216ENST00000523068 BCL11AQ9H165 835 aa13.23□□□□□ -0.29
PVT1-216ENST00000523068 PNMA3Q9UL41 463 aa13.23□□□□□ -0.29
PVT1-216ENST00000523068 PALD1Q9ULE6 856 aa13.23□□□□□ -0.29
PVT1-216ENST00000523068 HTTP42858 3142 aa13.23□□□□□ -0.29
PVT1-216ENST00000523068 CENPFP49454 3210 aa13.22□□□□□ -0.29
PVT1-216ENST00000523068 CYP2C8P10632 490 aa13.22□□□□□ -0.29
PVT1-216ENST00000523068 PSMC4P43686 418 aa13.22□□□□□ -0.29
PVT1-216ENST00000523068 PABPC4Q13310 644 aaKnown RBP eCLIP13.22□□□□□ -0.29
PVT1-216ENST00000523068 SLC9C2Q5TAH2 1124 aa13.22□□□□□ -0.29
PVT1-216ENST00000523068 SMCR8Q8TEV9 937 aaPredicted RBP13.22□□□□□ -0.29
PVT1-216ENST00000523068 DNAJC2Q99543 621 aaKnown RBP13.22□□□□□ -0.29
PVT1-216ENST00000523068 LRRCC1Q9C099 1032 aa13.22□□□□□ -0.29
PVT1-216ENST00000523068 ARHGAP39Q9C0H5 1083 aa13.22□□□□□ -0.29
PVT1-216ENST00000523068 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.22□□□□□ -0.29
PVT1-216ENST00000523068 AGTPBP1Q9UPW5 1226 aa13.22□□□□□ -0.29
PVT1-216ENST00000523068 PTCH2Q9Y6C5 1203 aa13.22□□□□□ -0.29
PVT1-216ENST00000523068 MYH8P13535 1937 aa13.21□□□□□ -0.29
PVT1-216ENST00000523068 MAGEB6P1A0A0J9YX57 407 aa13.21□□□□□ -0.29
PVT1-216ENST00000523068 GOLIM4O00461 696 aa13.21□□□□□ -0.29
PVT1-216ENST00000523068 FMNL1O95466 1100 aaPredicted RBP13.21□□□□□ -0.29
PVT1-216ENST00000523068 BCRP11274 1271 aa13.21□□□□□ -0.29
PVT1-216ENST00000523068 ATP5JP18859 108 aa13.21□□□□□ -0.29
PVT1-216ENST00000523068 SPP2Q13103 211 aa13.21□□□□□ -0.29
PVT1-216ENST00000523068 TTC6Q86TZ1 520 aa13.21□□□□□ -0.29
PVT1-216ENST00000523068 CCDC84Q86UT8 332 aaPredicted RBP13.21□□□□□ -0.29
PVT1-216ENST00000523068 SAP30BPQ9UHR5 308 aaKnown RBP13.21□□□□□ -0.29
PVT1-216ENST00000523068 DDX60LQ5H9U9 1706 aaKnown RBP13.21□□□□□ -0.3
PVT1-216ENST00000523068 PDE6AP16499 860 aa13.2□□□□□ -0.3
PVT1-216ENST00000523068 FCGRTP55899 365 aa13.2□□□□□ -0.3
PVT1-216ENST00000523068 RRP1BQ14684 758 aaKnown RBP13.2□□□□□ -0.3
PVT1-216ENST00000523068 SH3D19Q5HYK7 790 aa13.2□□□□□ -0.3
PVT1-216ENST00000523068 ZNF333Q96JL9 665 aa13.2□□□□□ -0.3
PVT1-216ENST00000523068 TRIM47Q96LD4 638 aa13.2□□□□□ -0.3
PVT1-216ENST00000523068 RIOK1Q9BRS2 568 aaKnown RBP13.2□□□□□ -0.3
PVT1-216ENST00000523068 WDR18Q9BV38 432 aa13.2□□□□□ -0.3
PVT1-216ENST00000523068 TMEM106CQ9BVX2 250 aa13.2□□□□□ -0.3
PVT1-216ENST00000523068 CRNKL1Q9BZJ0 848 aaKnown RBP13.2□□□□□ -0.3
PVT1-216ENST00000523068 EHD4Q9H223 541 aa13.2□□□□□ -0.3
PVT1-216ENST00000523068 DNAJC18Q9H819 358 aa13.2□□□□□ -0.3
PVT1-216ENST00000523068 PAG1Q9NWQ8 432 aa13.2□□□□□ -0.3
PVT1-216ENST00000523068 SRRDQ9UH36 339 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 860.8 ms