RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	TP53INP2	Q8IXH6	220 aa		5.44	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	FLCN	Q8NFG4	579 aa		5.44	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	CRELD1	Q96HD1	420 aa		5.44	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	MIR1-1HG	Q9H1L0	117 aa		5.44	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	VAV3	Q9UKW4	847 aa		5.44	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	SNX11	Q9Y5W9	270 aa		5.44	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	FBXO24	O75426	580 aa		5.43	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	LRIG2	O94898	1065 aa		5.43	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	CELA3A	P09093	270 aa		5.43	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	TXK	P42681	527 aa		5.43	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	PRKCQ	Q04759	706 aa		5.43	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	RING1	Q06587	406 aa		5.43	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	PDE4B	Q07343	736 aa		5.43	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	CDK5R2	Q13319	367 aa		5.43	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	MFSD2A	Q8NA29	543 aa		5.43	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	STK35	Q8TDR2	534 aa		5.43	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	C8orf37	Q96NL8	207 aa		5.43	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	SETDB2	Q96T68	719 aa		5.43	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	DUSP23	Q9BVJ7	150 aa		5.43	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	MAPK8IP1	Q9UQF2	711 aa		5.43	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	OAS3	Q9Y6K5	1087 aa	Known RBP	5.43	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	BIN1	O00499	593 aa		5.42	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	SORBS3	O60504	671 aa		5.42	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	PAGE1	O75459	146 aa		5.42	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	NEFM	P07197	916 aa		5.42	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	TAF1C	Q15572	869 aa	Predicted RBP	5.42	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	CYFIP1	Q7L576	1253 aa		5.42	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	HRASLS5	Q96KN8	279 aa		5.42	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	PSMG3-AS1	Q96PY0	264 aa		5.42	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	PRDM10	Q9NQV6	1147 aa		5.42	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	PARP2	Q9UGN5	583 aa		5.42	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	ZC3H7B	Q9UGR2	993 aa	Known RBP	5.42	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	GNAT3	A8MTJ3	354 aa		5.41	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	DYNC1LI2	O43237	492 aa	Predicted RBP	5.41	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	RECK	O95980	971 aa		5.41	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	CEACAM5	P06731	702 aa		5.41	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	JUNB	P17275	347 aa	Predicted RBP	5.41	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	CYP7A1	P22680	504 aa		5.41	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	LIG3	P49916	1009 aa		5.41	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	CLCN7	P51798	805 aa		5.41	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	TSNAXIP1	Q2TAA8	658 aa		5.41	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	AGMO	Q6ZNB7	445 aa		5.41	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	HID1	Q8IV36	788 aa		5.41	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	TOP6BL	Q8N6T0	577 aa		5.41	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	GRIN3A	Q8TCU5	1115 aa		5.41	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	FOXQ1	Q9C009	403 aa		5.41	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	WNT10A	Q9GZT5	417 aa		5.41	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	PRDM5	Q9NQX1	630 aa	Predicted RBP	5.41	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	SHROOM4	Q9ULL8	1493 aa		5.4	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	BPNT1	O95861	308 aa		5.4	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	ETF1	P62495	437 aa	Known RBP	5.4	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	TAGLN	Q01995	201 aa	Known RBP	5.4	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	MRPL58	Q14197	206 aa	Known RBP	5.4	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	PPM1J	Q5JR12	505 aa		5.4	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	C22orf34	Q6ZV56	151 aa		5.4	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	ARMCX6	Q7L4S7	300 aa		5.4	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	BCL7C	Q8WUZ0	217 aa	Predicted RBP	5.4	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	ASB11	Q8WXH4	323 aa		5.4	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	GAL3ST3	Q96A11	431 aa		5.4	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	LGR6	Q9HBX8	967 aa		5.4	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	ADAM30	Q9UKF2	790 aa		5.4	□□□□□ -1.54
CALCOCO2-223	ENST00000514267	PRAMEF27	A3QJZ7	478 aa		5.39	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	DCDC2C	A8MYV0	355 aa		5.39	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	SCAMP3	O14828	347 aa	Known RBP	5.39	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	ZC3H6	P61129	1189 aa	Known RBP	5.39	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	WIPI1	Q5MNZ9	446 aa	Predicted RBP	5.39	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	ANGEL2	Q5VTE6	544 aa	Known RBP	5.39	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	LRFN4	Q6PJG9	635 aa		5.39	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	C12orf40	Q86WS4	652 aa		5.39	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	ASIC4	Q96FT7	647 aa		5.39	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	CCDC120	Q96HB5	630 aa		5.39	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	USP35	Q9P2H5	1018 aa		5.39	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	VTI1B	Q9UEU0	232 aa		5.39	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	ADGRE2	Q9UHX3	823 aa		5.39	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	USP31	Q70CQ4	1352 aa		5.39	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	LOC105371045	A0A1W2PR82	267 aa		5.38	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	TAL1	P17542	331 aa	Predicted RBP	5.38	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	NTF4	P34130	210 aa		5.38	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	ETV3	P41162	512 aa		5.38	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	KIR3DL1	P43629	444 aa		5.38	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	OXCT1	P55809	520 aa		5.38	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	PLCL1	Q15111	1095 aa		5.38	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	ABI1	Q8IZP0	508 aa		5.38	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	PLPPR2	Q96GM1	343 aa		5.38	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	FMNL2	Q96PY5	1086 aa		5.38	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	TNKS2	Q9H2K2	1166 aa		5.38	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	PAK6	Q9NQU5	681 aa	Predicted RBP	5.38	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	CST3	P01034	146 aa	Predicted RBP	5.37	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	RPL6	Q02878	288 aa	Known RBP	5.37	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	CBLL1	Q75N03	491 aa		5.37	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	SHISA5	Q8N114	240 aa		5.37	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	BACH2	Q9BYV9	841 aa		5.37	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	TPX2	Q9ULW0	747 aa	Known RBP	5.37	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	ADAMTS4	O75173	837 aa		5.36	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	LEFTY1	O75610	366 aa		5.36	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	FUT4	P22083	530 aa		5.36	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	YARS	P54577	528 aa	Known RBP	5.36	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	LMNB2	Q03252	620 aa		5.36	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	MLEC	Q14165	292 aa		5.36	□□□□□ -1.55
CALCOCO2-223	ENST00000514267	SFRP5	Q5T4F7	317 aa		5.36	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms