RNA–Protein interactions for RNA: ENST00000508357.5

PTPN20-218, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best)

Gene PTPN20, Length 1,213 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-218ENST00000508357 SPDYE5A6NIY4 337 aa14.93□□□□□ -0.02
PTPN20-218ENST00000508357 M0R2C6 588 aa14.93□□□□□ -0.02
PTPN20-218ENST00000508357 SHROOM1Q2M3G4 852 aaPredicted RBP14.93□□□□□ -0.02
PTPN20-218ENST00000508357 METTL16Q86W50 562 aaKnown RBP14.93□□□□□ -0.02
PTPN20-218ENST00000508357 CERS3Q8IU89 383 aa14.93□□□□□ -0.02
PTPN20-218ENST00000508357 SLC10A4Q96EP9 437 aa14.93□□□□□ -0.02
PTPN20-218ENST00000508357 ZBTB47Q9UFB7 747 aaPredicted RBP14.93□□□□□ -0.02
PTPN20-218ENST00000508357 SMIM22K7EJ46 135 aa14.92□□□□□ -0.02
PTPN20-218ENST00000508357 RNF113AO15541 343 aaKnown RBP14.92□□□□□ -0.02
PTPN20-218ENST00000508357 TBC1D12O60347 775 aa14.92□□□□□ -0.02
PTPN20-218ENST00000508357 ZBTB48P10074 688 aaPredicted RBP14.92□□□□□ -0.02
PTPN20-218ENST00000508357 USP5P45974 858 aa14.92□□□□□ -0.02
PTPN20-218ENST00000508357 JAG1P78504 1218 aa14.92□□□□□ -0.02
PTPN20-218ENST00000508357 MAP2K1Q02750 393 aaPredicted RBP14.92□□□□□ -0.02
PTPN20-218ENST00000508357 APPBP2Q92624 585 aa14.92□□□□□ -0.02
PTPN20-218ENST00000508357 CRNKL1Q9BZJ0 848 aaKnown RBP14.92□□□□□ -0.02
PTPN20-218ENST00000508357 OSBPL3Q9H4L5 887 aa14.92□□□□□ -0.02
PTPN20-218ENST00000508357 DCP1AQ9NPI6 582 aaPredicted RBP14.92□□□□□ -0.02
PTPN20-218ENST00000508357 TSKSQ9UJT2 592 aa14.92□□□□□ -0.02
PTPN20-218ENST00000508357 CYP2D6P10635 497 aa14.91□□□□□ -0.02
PTPN20-218ENST00000508357 HSPA8P11142 646 aaKnown RBP14.91□□□□□ -0.02
PTPN20-218ENST00000508357 ZSCAN25Q6NSZ9 544 aa14.91□□□□□ -0.02
PTPN20-218ENST00000508357 CCDC84Q86UT8 332 aaPredicted RBP14.91□□□□□ -0.02
PTPN20-218ENST00000508357 OTUD5Q96G74 571 aa14.91□□□□□ -0.02
PTPN20-218ENST00000508357 MS4A4AQ96JQ5 239 aa14.91□□□□□ -0.02
PTPN20-218ENST00000508357 SEC62Q99442 399 aaKnown RBP14.91□□□□□ -0.02
PTPN20-218ENST00000508357 FSD1Q9BTV5 496 aa14.91□□□□□ -0.02
PTPN20-218ENST00000508357 DHX36Q9H2U1 1008 aaKnown RBP14.91□□□□□ -0.02
PTPN20-218ENST00000508357 CSADQ9Y600 493 aa14.91□□□□□ -0.02
PTPN20-218ENST00000508357 PTPRFP10586 1907 aa14.91□□□□□ -0.02
PTPN20-218ENST00000508357 IGF2BP3O00425 579 aaKnown RBP eCLIP14.9□□□□□ -0.02
PTPN20-218ENST00000508357 FOXP2O15409 715 aa14.9□□□□□ -0.02
PTPN20-218ENST00000508357 GSPT1P15170 499 aaKnown RBP14.9□□□□□ -0.02
PTPN20-218ENST00000508357 PLCD1P51178 756 aa14.9□□□□□ -0.02
PTPN20-218ENST00000508357 ZMYM1Q5SVZ6 1142 aa14.9□□□□□ -0.02
PTPN20-218ENST00000508357 SKAP1Q86WV1 359 aa14.9□□□□□ -0.02
PTPN20-218ENST00000508357 SCYL3Q8IZE3 742 aa14.9□□□□□ -0.02
PTPN20-218ENST00000508357 STRBPQ96SI9 672 aaKnown RBP14.9□□□□□ -0.02
PTPN20-218ENST00000508357 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.9□□□□□ -0.02
PTPN20-218ENST00000508357 EPB41L4AQ9HCS5 686 aaPredicted RBP14.9□□□□□ -0.02
PTPN20-218ENST00000508357 PI4KBQ9UBF8 816 aa14.9□□□□□ -0.02
PTPN20-218ENST00000508357 ZFYP08048 801 aaPredicted RBP14.89□□□□□ -0.03
PTPN20-218ENST00000508357 TM4SF4P48230 202 aa14.89□□□□□ -0.03
PTPN20-218ENST00000508357 GABPAQ06546 454 aa14.89□□□□□ -0.03
PTPN20-218ENST00000508357 PPIL2Q13356 520 aa14.89□□□□□ -0.03
PTPN20-218ENST00000508357 ERO1BQ86YB8 467 aa14.89□□□□□ -0.03
PTPN20-218ENST00000508357 BRI3BPQ8WY22 251 aa14.89□□□□□ -0.03
PTPN20-218ENST00000508357 AIDAQ96BJ3 306 aa14.89□□□□□ -0.03
PTPN20-218ENST00000508357 EVI5LQ96CN4 794 aa14.89□□□□□ -0.03
PTPN20-218ENST00000508357 PTPN18Q99952 460 aa14.89□□□□□ -0.03
PTPN20-218ENST00000508357 RNF186Q9NXI6 227 aa14.89□□□□□ -0.03
PTPN20-218ENST00000508357 HERC5Q9UII4 1024 aaKnown RBP14.89□□□□□ -0.03
PTPN20-218ENST00000508357 LOC285556D6RIA3 1793 aa14.88□□□□□ -0.03
PTPN20-218ENST00000508357 CYP2D7A0A087X1C5 515 aa14.88□□□□□ -0.03
PTPN20-218ENST00000508357 TESPA1A2RU30 521 aaPredicted RBP14.88□□□□□ -0.03
PTPN20-218ENST00000508357 IRF6O14896 467 aa14.88□□□□□ -0.03
PTPN20-218ENST00000508357 GPAA1O43292 621 aa14.88□□□□□ -0.03
PTPN20-218ENST00000508357 MOGSQ13724 837 aa14.88□□□□□ -0.03
PTPN20-218ENST00000508357 CCDC129Q6ZRS4 1044 aa14.88□□□□□ -0.03
PTPN20-218ENST00000508357 EHD4Q9H223 541 aa14.88□□□□□ -0.03
PTPN20-218ENST00000508357 SLC4A4Q9Y6R1 1079 aa14.88□□□□□ -0.03
PTPN20-218ENST00000508357 A0A0D9SFI3 127 aa14.87□□□□□ -0.03
PTPN20-218ENST00000508357 MANSC4A6NHS7 340 aaPredicted RBP14.87□□□□□ -0.03
PTPN20-218ENST00000508357 GSG1L2A8MUP6 293 aa14.87□□□□□ -0.03
PTPN20-218ENST00000508357 CTNND1O60716 968 aaKnown RBP14.87□□□□□ -0.03
PTPN20-218ENST00000508357 HLA-DOAP06340 250 aa14.87□□□□□ -0.03
PTPN20-218ENST00000508357 PTPRAP18433 802 aa14.87□□□□□ -0.03
PTPN20-218ENST00000508357 SHMT1P34896 483 aa14.87□□□□□ -0.03
PTPN20-218ENST00000508357 CAP2P40123 477 aa14.87□□□□□ -0.03
PTPN20-218ENST00000508357 PPATQ06203 517 aa14.87□□□□□ -0.03
PTPN20-218ENST00000508357 SREBF2Q12772 1141 aa14.87□□□□□ -0.03
PTPN20-218ENST00000508357 SLC44A5Q8NCS7 719 aa14.87□□□□□ -0.03
PTPN20-218ENST00000508357 FAM227BQ96M60 508 aa14.87□□□□□ -0.03
PTPN20-218ENST00000508357 MCM9Q9NXL9 1143 aa14.87□□□□□ -0.03
PTPN20-218ENST00000508357 SAGE1Q9NXZ1 904 aa14.87□□□□□ -0.03
PTPN20-218ENST00000508357 KCNH4Q9UQ05 1017 aa14.87□□□□□ -0.03
PTPN20-218ENST00000508357 GDF11O95390 407 aa14.86□□□□□ -0.03
PTPN20-218ENST00000508357 CTCFP49711 727 aaPredicted RBP14.86□□□□□ -0.03
PTPN20-218ENST00000508357 LBX1P52954 281 aa14.86□□□□□ -0.03
PTPN20-218ENST00000508357 IFNL1Q8IU54 200 aa14.86□□□□□ -0.03
PTPN20-218ENST00000508357 R3HDMLQ9H3Y0 253 aa14.86□□□□□ -0.03
PTPN20-218ENST00000508357 ATP8A2Q9NTI2 1148 aa14.86□□□□□ -0.03
PTPN20-218ENST00000508357 SERPINB13Q9UIV8 391 aa14.86□□□□□ -0.03
PTPN20-218ENST00000508357 CCL15-CCL14A0A0B4J2E2 113 aa14.85□□□□□ -0.03
PTPN20-218ENST00000508357 TRPA1O75762 1119 aa14.85□□□□□ -0.03
PTPN20-218ENST00000508357 NMIQ13287 307 aaPredicted RBP14.85□□□□□ -0.03
PTPN20-218ENST00000508357 CCL15Q16663 113 aa14.85□□□□□ -0.03
PTPN20-218ENST00000508357 TTC22Q5TAA0 569 aa14.85□□□□□ -0.03
PTPN20-218ENST00000508357 TATDN1Q6P1N9 297 aa14.85□□□□□ -0.03
PTPN20-218ENST00000508357 CTR9Q6PD62 1173 aa14.85□□□□□ -0.03
PTPN20-218ENST00000508357 CENPQQ7L2Z9 268 aaPredicted RBP14.85□□□□□ -0.03
PTPN20-218ENST00000508357 ZNF589Q86UQ0 364 aaPredicted RBP14.85□□□□□ -0.03
PTPN20-218ENST00000508357 FOXP4Q8IVH2 680 aaPredicted RBP14.85□□□□□ -0.03
PTPN20-218ENST00000508357 REM2Q8IYK8 340 aaPredicted RBP14.85□□□□□ -0.03
PTPN20-218ENST00000508357 FAM43AQ8N2R8 423 aa14.85□□□□□ -0.03
PTPN20-218ENST00000508357 CRACR2BQ8N4Y2 399 aaPredicted RBP14.85□□□□□ -0.03
PTPN20-218ENST00000508357 DYNLL2Q96FJ2 89 aa14.85□□□□□ -0.03
PTPN20-218ENST00000508357 ZBTB21Q9ULJ3 1066 aa14.85□□□□□ -0.03
PTPN20-218ENST00000508357 AFG3L2Q9Y4W6 797 aa14.85□□□□□ -0.03
PTPN20-218ENST00000508357 ROBO3Q96MS0 1386 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms