RNA–Protein interactions for RNA: ENST00000507245.1

SMAD5-203, Transcript of SMAD family member 5, humanhuman

TSL 2

Gene SMAD5, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-203ENST00000507245 MINDY4BA8MYZ0 360 aa8.56□□□□□ -1.04
SMAD5-203ENST00000507245 LIG3P49916 1009 aa8.56□□□□□ -1.04
SMAD5-203ENST00000507245 SNRPNP63162 240 aaKnown RBP8.56□□□□□ -1.04
SMAD5-203ENST00000507245 TRIM28Q13263 835 aaKnown RBP8.56□□□□□ -1.04
SMAD5-203ENST00000507245 ZNF394Q53GI3 561 aa8.56□□□□□ -1.04
SMAD5-203ENST00000507245 PCNX4Q63HM2 1172 aa8.56□□□□□ -1.04
SMAD5-203ENST00000507245 BEND7Q8N7W2 519 aaPredicted RBP8.56□□□□□ -1.04
SMAD5-203ENST00000507245 CORO1BQ9BR76 489 aa8.56□□□□□ -1.04
SMAD5-203ENST00000507245 TRIM56Q9BRZ2 755 aaKnown RBP8.56□□□□□ -1.04
SMAD5-203ENST00000507245 PLVAPQ9BX97 442 aa8.56□□□□□ -1.04
SMAD5-203ENST00000507245 NOP53Q9NZM5 478 aaKnown RBP8.56□□□□□ -1.04
SMAD5-203ENST00000507245 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.56□□□□□ -1.04
SMAD5-203ENST00000507245 POLR1AO95602 1720 aaPredicted RBP8.56□□□□□ -1.04
SMAD5-203ENST00000507245 ANKRD30AQ9BXX3 1397 aa8.56□□□□□ -1.04
SMAD5-203ENST00000507245 WASHC2CQ9Y4E1 1318 aa8.55□□□□□ -1.04
SMAD5-203ENST00000507245 F6X3S4 739 aa8.55□□□□□ -1.04
SMAD5-203ENST00000507245 PAGE1O75459 146 aa8.55□□□□□ -1.04
SMAD5-203ENST00000507245 ARNTP27540 789 aa8.55□□□□□ -1.04
SMAD5-203ENST00000507245 RPS26P62854 115 aaKnown RBP8.55□□□□□ -1.04
SMAD5-203ENST00000507245 COL9A3Q14050 684 aaPredicted RBP8.55□□□□□ -1.04
SMAD5-203ENST00000507245 SUZ12Q15022 739 aaKnown RBP8.55□□□□□ -1.04
SMAD5-203ENST00000507245 SETDB1Q15047 1291 aa8.55□□□□□ -1.04
SMAD5-203ENST00000507245 PRRT3Q5FWE3 981 aa8.55□□□□□ -1.04
SMAD5-203ENST00000507245 TMEM74Q96NL1 305 aa8.55□□□□□ -1.04
SMAD5-203ENST00000507245 CYP8B1Q9UNU6 501 aa8.55□□□□□ -1.04
SMAD5-203ENST00000507245 PCDHGB7Q9Y5F8 929 aa8.55□□□□□ -1.04
SMAD5-203ENST00000507245 NLRP1Q9C000 1473 aa8.55□□□□□ -1.04
SMAD5-203ENST00000507245 KDM5AP29375 1690 aaKnown RBP8.55□□□□□ -1.04
SMAD5-203ENST00000507245 CFAP65Q6ZU64 1925 aaKnown RBP8.54□□□□□ -1.04
SMAD5-203ENST00000507245 UNC13BO14795 1591 aa8.54□□□□□ -1.04
SMAD5-203ENST00000507245 ERVK-7P63135 1459 aa8.54□□□□□ -1.04
SMAD5-203ENST00000507245 TNRQ92752 1358 aa8.54□□□□□ -1.04
SMAD5-203ENST00000507245 HOXB4P17483 251 aaPredicted RBP8.54□□□□□ -1.04
SMAD5-203ENST00000507245 CD68P34810 354 aaPredicted RBP8.54□□□□□ -1.04
SMAD5-203ENST00000507245 GNL2Q13823 731 aaKnown RBP8.54□□□□□ -1.04
SMAD5-203ENST00000507245 HP1BP3Q5SSJ5 553 aaPredicted RBP8.54□□□□□ -1.04
SMAD5-203ENST00000507245 LINC00114Q6XXX2 140 aa8.54□□□□□ -1.04
SMAD5-203ENST00000507245 KLHDC7BQ96G42 594 aa8.54□□□□□ -1.04
SMAD5-203ENST00000507245 COPRSQ9NQ92 184 aa8.54□□□□□ -1.04
SMAD5-203ENST00000507245 DDX41Q9UJV9 622 aaKnown RBP8.54□□□□□ -1.04
SMAD5-203ENST00000507245 RRBP1Q9P2E9 1410 aaKnown RBP8.54□□□□□ -1.04
SMAD5-203ENST00000507245 NEURL4Q96JN8 1562 aa8.53□□□□□ -1.04
SMAD5-203ENST00000507245 ROCK1Q13464 1354 aa8.53□□□□□ -1.04
SMAD5-203ENST00000507245 A0A0A0MRY4 1105 aa8.53□□□□□ -1.04
SMAD5-203ENST00000507245 NLRP12P59046 1061 aa8.53□□□□□ -1.04
SMAD5-203ENST00000507245 ZC3H6P61129 1189 aaKnown RBP8.53□□□□□ -1.04
SMAD5-203ENST00000507245 POU4F3Q15319 338 aa8.53□□□□□ -1.04
SMAD5-203ENST00000507245 LLGL2Q6P1M3 1020 aa8.53□□□□□ -1.04
SMAD5-203ENST00000507245 TRIM11Q96F44 468 aa8.53□□□□□ -1.04
SMAD5-203ENST00000507245 USP26Q9BXU7 913 aa8.53□□□□□ -1.04
SMAD5-203ENST00000507245 RRP7BPQ9NSQ0 103 aa8.53□□□□□ -1.04
SMAD5-203ENST00000507245 TLR6Q9Y2C9 796 aa8.53□□□□□ -1.04
SMAD5-203ENST00000507245 UBR1Q8IWV7 1749 aa8.53□□□□□ -1.04
SMAD5-203ENST00000507245 LTBP4Q8N2S1 1624 aa8.52□□□□□ -1.05
SMAD5-203ENST00000507245 GSTP1P09211 210 aaKnown RBP8.52□□□□□ -1.05
SMAD5-203ENST00000507245 HGSNATQ68CP4 663 aa8.52□□□□□ -1.05
SMAD5-203ENST00000507245 AGMOQ6ZNB7 445 aa8.52□□□□□ -1.05
SMAD5-203ENST00000507245 FBXO11Q86XK2 927 aa8.52□□□□□ -1.05
SMAD5-203ENST00000507245 FMR1NBQ8N0W7 255 aaPredicted RBP8.52□□□□□ -1.05
SMAD5-203ENST00000507245 GALNT11Q8NCW6 608 aa8.52□□□□□ -1.05
SMAD5-203ENST00000507245 PHC3Q8NDX5 983 aa8.52□□□□□ -1.05
SMAD5-203ENST00000507245 KCNB2Q92953 911 aa8.52□□□□□ -1.05
SMAD5-203ENST00000507245 SCARF2Q96GP6 870 aaPredicted RBP8.52□□□□□ -1.05
SMAD5-203ENST00000507245 MIR1-1HGQ9H1L0 117 aa8.52□□□□□ -1.05
SMAD5-203ENST00000507245 ADAMTS8Q9UP79 889 aa8.52□□□□□ -1.05
SMAD5-203ENST00000507245 EFCAB6Q5THR3 1501 aa8.52□□□□□ -1.05
SMAD5-203ENST00000507245 ANKRD50Q9ULJ7 1429 aa8.52□□□□□ -1.05
SMAD5-203ENST00000507245 GCC2Q8IWJ2 1684 aa8.52□□□□□ -1.05
SMAD5-203ENST00000507245 UGGT1Q9NYU2 1555 aa8.52□□□□□ -1.05
SMAD5-203ENST00000507245 TET3O43151 1660 aa8.51□□□□□ -1.05
SMAD5-203ENST00000507245 FAM181BA6NEQ2 426 aa8.51□□□□□ -1.05
SMAD5-203ENST00000507245 BMP6P22004 513 aa8.51□□□□□ -1.05
SMAD5-203ENST00000507245 LORP23490 312 aaPredicted RBP8.51□□□□□ -1.05
SMAD5-203ENST00000507245 MAOBP27338 520 aa8.51□□□□□ -1.05
SMAD5-203ENST00000507245 EIF4A3P38919 411 aaKnown RBP8.51□□□□□ -1.05
SMAD5-203ENST00000507245 RAD51AP2Q09MP3 1159 aa8.51□□□□□ -1.05
SMAD5-203ENST00000507245 SNAP47Q5SQN1 464 aa8.51□□□□□ -1.05
SMAD5-203ENST00000507245 MAP1SQ66K74 1059 aaPredicted RBP8.51□□□□□ -1.05
SMAD5-203ENST00000507245 ACSBG1Q96GR2 724 aa8.51□□□□□ -1.05
SMAD5-203ENST00000507245 SPON2Q9BUD6 331 aa8.51□□□□□ -1.05
SMAD5-203ENST00000507245 ZC3H12CQ9C0D7 883 aaKnown RBP8.51□□□□□ -1.05
SMAD5-203ENST00000507245 INPP5FQ9Y2H2 1132 aa8.51□□□□□ -1.05
SMAD5-203ENST00000507245 MED14O60244 1454 aa8.51□□□□□ -1.05
SMAD5-203ENST00000507245 IQGAP3Q86VI3 1631 aa8.51□□□□□ -1.05
SMAD5-203ENST00000507245 DEAF1O75398 565 aaPredicted RBP8.5□□□□□ -1.05
SMAD5-203ENST00000507245 RACK1P63244 317 aaKnown RBP8.5□□□□□ -1.05
SMAD5-203ENST00000507245 LMNB2Q03252 620 aa8.5□□□□□ -1.05
SMAD5-203ENST00000507245 CAMK2GQ13555 558 aaPredicted RBP8.5□□□□□ -1.05
SMAD5-203ENST00000507245 PDE3AQ14432 1141 aa8.5□□□□□ -1.05
SMAD5-203ENST00000507245 DUOXA2Q1HG44 320 aa8.5□□□□□ -1.05
SMAD5-203ENST00000507245 ILDR2Q71H61 639 aa8.5□□□□□ -1.05
SMAD5-203ENST00000507245 KIAA0825Q8IV33 1275 aa8.5□□□□□ -1.05
SMAD5-203ENST00000507245 ACBD3Q9H3P7 528 aa8.5□□□□□ -1.05
SMAD5-203ENST00000507245 CAPN10Q9HC96 672 aa8.5□□□□□ -1.05
SMAD5-203ENST00000507245 PIK3C2BO00750 1634 aa8.5□□□□□ -1.05
SMAD5-203ENST00000507245 RPRD2Q5VT52 1461 aaKnown RBP8.5□□□□□ -1.05
SMAD5-203ENST00000507245 CNTNAP5Q8WYK1 1306 aa8.5□□□□□ -1.05
SMAD5-203ENST00000507245 SLIT1O75093 1534 aa8.49□□□□□ -1.05
SMAD5-203ENST00000507245 SYNMO15061 1565 aa8.49□□□□□ -1.05
SMAD5-203ENST00000507245 NOS1P29475 1434 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms