RNA–Protein interactions for RNA: ENST00000507116.5

PDE4D-216, Transcript of phosphodiesterase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4D, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-216ENST00000507116 KRI1Q8N9T8 703 aaKnown RBP6.95□□□□□ -1.3
PDE4D-216ENST00000507116 SUN5Q8TC36 379 aa6.95□□□□□ -1.3
PDE4D-216ENST00000507116 APPBP2Q92624 585 aa6.95□□□□□ -1.3
PDE4D-216ENST00000507116 CTAGE1Q96RT6 745 aa6.95□□□□□ -1.3
PDE4D-216ENST00000507116 UBE2OQ9C0C9 1292 aaKnown RBP6.95□□□□□ -1.3
PDE4D-216ENST00000507116 TPCN1Q9ULQ1 816 aa6.95□□□□□ -1.3
PDE4D-216ENST00000507116 ZNF644Q9H582 1327 aaPredicted RBP6.95□□□□□ -1.3
PDE4D-216ENST00000507116 CCDC151A5D8V7 595 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 TMEM247A6NEH6 219 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 LINGO3P0C6S8 592 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 CCNCP24863 283 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 MSL1Q68DK7 614 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 HDXQ7Z353 690 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 MAIP1Q8WWC4 291 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 PHF23Q9BUL5 403 aaPredicted RBP6.94□□□□□ -1.3
PDE4D-216ENST00000507116 PDE11AQ9HCR9 933 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 AASDHPPTQ9NRN7 309 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 CIDEBQ9UHD4 219 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 TIMM22Q9Y584 194 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 GOLGA6L7A0A1B0GV03 622 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 TADA3O75528 432 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 GNAT2P19087 354 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 MLH1P40692 756 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 PPIDQ08752 370 aaKnown RBP6.94□□□□□ -1.3
PDE4D-216ENST00000507116 BRD3Q15059 726 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 RASA2Q15283 850 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 LONRF2Q1L5Z9 754 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 CFAP58Q5T655 872 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 ZCCHC8Q6NZY4 707 aaKnown RBP6.94□□□□□ -1.3
PDE4D-216ENST00000507116 C11orf74Q86VG3 221 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 NDUFAF2Q8N183 169 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 SMC1BQ8NDV3 1235 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 CLUAP1Q96AJ1 413 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 ZNF653Q96CK0 615 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 GPATCH3Q96I76 525 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 GBP3Q9H0R5 595 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 PREBQ9HCU5 417 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 CHPF2Q9P2E5 772 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 PPP1R1BQ9UD71 204 aaPredicted RBP6.94□□□□□ -1.3
PDE4D-216ENST00000507116 PCSK1NQ9UHG2 260 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 ATAD2Q6PL18 1390 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 A6NHS1 94 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 SPTLC2O15270 562 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 PSMC4P43686 418 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 PMS2P54278 862 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 PPP1R15BQ5SWA1 713 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 CCDC122Q5T0U0 273 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 PI16Q6UXB8 463 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 YTHDF3Q7Z739 585 aaKnown RBP6.94□□□□□ -1.3
PDE4D-216ENST00000507116 AFAP1L1Q8TED9 768 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 USP6NLQ92738 828 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 SNX27Q96L92 541 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 CLIC6Q96NY7 704 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 VCPKMTQ9H867 229 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 AMOTL2Q9Y2J4 779 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 DAAM1Q9Y4D1 1078 aa6.94□□□□□ -1.3
PDE4D-216ENST00000507116 ZBED4O75132 1171 aa6.93□□□□□ -1.3
PDE4D-216ENST00000507116 ATP4AP20648 1035 aa6.93□□□□□ -1.3
PDE4D-216ENST00000507116 RASSF7Q02833 373 aa6.93□□□□□ -1.3
PDE4D-216ENST00000507116 COX10Q12887 443 aa6.93□□□□□ -1.3
PDE4D-216ENST00000507116 ZBTB17Q13105 803 aa6.93□□□□□ -1.3
PDE4D-216ENST00000507116 BLMHQ13867 455 aa6.93□□□□□ -1.3
PDE4D-216ENST00000507116 MUM1Q2TAK8 710 aa6.93□□□□□ -1.3
PDE4D-216ENST00000507116 CFAP157Q5JU67 520 aa6.93□□□□□ -1.3
PDE4D-216ENST00000507116 KANK4Q5T7N3 995 aaPredicted RBP6.93□□□□□ -1.3
PDE4D-216ENST00000507116 CCBE1Q6UXH8 406 aaPredicted RBP6.93□□□□□ -1.3
PDE4D-216ENST00000507116 C14orf80Q86SX3 495 aa6.93□□□□□ -1.3
PDE4D-216ENST00000507116 CCDC155Q8N6L0 562 aa6.93□□□□□ -1.3
PDE4D-216ENST00000507116 ACMSDQ8TDX5 336 aa6.93□□□□□ -1.3
PDE4D-216ENST00000507116 TBC1D31Q96DN5 1066 aa6.93□□□□□ -1.3
PDE4D-216ENST00000507116 MAP3K14Q99558 947 aa6.93□□□□□ -1.3
PDE4D-216ENST00000507116 EIF2AQ9BY44 585 aaKnown RBP6.93□□□□□ -1.3
PDE4D-216ENST00000507116 ZCWPW1Q9H0M4 648 aa6.93□□□□□ -1.3
PDE4D-216ENST00000507116 DCAF16Q9NXF7 216 aa6.93□□□□□ -1.3
PDE4D-216ENST00000507116 R3HDM2Q9Y2K5 976 aaKnown RBP6.93□□□□□ -1.3
PDE4D-216ENST00000507116 SH3GLB1Q9Y371 365 aa6.93□□□□□ -1.3
PDE4D-216ENST00000507116 RASSF10A6NK89 507 aa6.93□□□□□ -1.3
PDE4D-216ENST00000507116 ALDH3A1P30838 453 aa6.93□□□□□ -1.3
PDE4D-216ENST00000507116 S100A5P33763 92 aa6.93□□□□□ -1.3
PDE4D-216ENST00000507116 CTCFP49711 727 aaPredicted RBP6.93□□□□□ -1.3
PDE4D-216ENST00000507116 BOLA3Q53S33 107 aa6.93□□□□□ -1.3
PDE4D-216ENST00000507116 ADALQ6DHV7 355 aa6.93□□□□□ -1.3
PDE4D-216ENST00000507116 TMEM53Q6P2H8 277 aa6.93□□□□□ -1.3
PDE4D-216ENST00000507116 SH3TC2Q8TF17 1288 aa6.93□□□□□ -1.3
PDE4D-216ENST00000507116 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.93□□□□□ -1.3
PDE4D-216ENST00000507116 LNPKQ9C0E8 428 aa6.93□□□□□ -1.3
PDE4D-216ENST00000507116 WDR35Q9P2L0 1181 aa6.93□□□□□ -1.3
PDE4D-216ENST00000507116 LUC7L2Q9Y383 392 aaKnown RBP6.93□□□□□ -1.3
PDE4D-216ENST00000507116 SCINQ9Y6U3 715 aa6.93□□□□□ -1.3
PDE4D-216ENST00000507116 IFT140Q96RY7 1462 aa6.93□□□□□ -1.3
PDE4D-216ENST00000507116 IQCA1LA6NCM1 817 aa6.92□□□□□ -1.3
PDE4D-216ENST00000507116 LRRIQ3A6PVS8 624 aaPredicted RBP6.92□□□□□ -1.3
PDE4D-216ENST00000507116 MEFVO15553 781 aaPredicted RBP6.92□□□□□ -1.3
PDE4D-216ENST00000507116 MGRN1O60291 552 aa6.92□□□□□ -1.3
PDE4D-216ENST00000507116 SHOX2O60902 331 aaPredicted RBP6.92□□□□□ -1.3
PDE4D-216ENST00000507116 PFDN1O60925 122 aa6.92□□□□□ -1.3
PDE4D-216ENST00000507116 RAPGEF3O95398 923 aa6.92□□□□□ -1.3
PDE4D-216ENST00000507116 ATP5JP18859 108 aa6.92□□□□□ -1.3
PDE4D-216ENST00000507116 CCT6AP40227 531 aaKnown RBP6.92□□□□□ -1.3
PDE4D-216ENST00000507116 DRP2Q13474 957 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms