RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 MAP3K12Q12852 859 aa12.7□□□□□ -0.38
NR1I3-222ENST00000506018 SH3BP5LQ7L8J4 393 aa12.7□□□□□ -0.38
NR1I3-222ENST00000506018 ZNF384Q8TF68 577 aa12.7□□□□□ -0.38
NR1I3-222ENST00000506018 EAF2Q96CJ1 260 aaPredicted RBP12.7□□□□□ -0.38
NR1I3-222ENST00000506018 KIF1BPQ96EK5 621 aa12.7□□□□□ -0.38
NR1I3-222ENST00000506018 PI4KBQ9UBF8 816 aa12.7□□□□□ -0.38
NR1I3-222ENST00000506018 HERC5Q9UII4 1024 aaKnown RBP12.7□□□□□ -0.38
NR1I3-222ENST00000506018 COG6Q9Y2V7 657 aa12.7□□□□□ -0.38
NR1I3-222ENST00000506018 MYH1P12882 1939 aa12.7□□□□□ -0.38
NR1I3-222ENST00000506018 PDE4DIPQ5VU43 2346 aa12.7□□□□□ -0.38
NR1I3-222ENST00000506018 IDH1O75874 414 aaKnown RBP12.69□□□□□ -0.38
NR1I3-222ENST00000506018 HOXD10P28358 340 aa12.69□□□□□ -0.38
NR1I3-222ENST00000506018 PRMT2P55345 433 aa12.69□□□□□ -0.38
NR1I3-222ENST00000506018 PPP4CP60510 307 aa12.69□□□□□ -0.38
NR1I3-222ENST00000506018 LACTBP83111 547 aaPredicted RBP12.69□□□□□ -0.38
NR1I3-222ENST00000506018 TTF1Q15361 905 aaPredicted RBP12.69□□□□□ -0.38
NR1I3-222ENST00000506018 RHPN1Q8TCX5 695 aa12.69□□□□□ -0.38
NR1I3-222ENST00000506018 SH3RF3Q8TEJ3 882 aaPredicted RBP12.69□□□□□ -0.38
NR1I3-222ENST00000506018 SSUH2Q9Y2M2 353 aa12.69□□□□□ -0.38
NR1I3-222ENST00000506018 RBBP6Q7Z6E9 1792 aaKnown RBP12.69□□□□□ -0.38
NR1I3-222ENST00000506018 MGAMO43451 1857 aa12.69□□□□□ -0.38
NR1I3-222ENST00000506018 A0A0G2JLL6 359 aaPredicted RBP12.69□□□□□ -0.38
NR1I3-222ENST00000506018 RAB11FIP3O75154 756 aa12.69□□□□□ -0.38
NR1I3-222ENST00000506018 HLA-DOAP06340 250 aa12.69□□□□□ -0.38
NR1I3-222ENST00000506018 IFIT2P09913 472 aaKnown RBP12.69□□□□□ -0.38
NR1I3-222ENST00000506018 CYP7A1P22680 504 aa12.69□□□□□ -0.38
NR1I3-222ENST00000506018 SLC9C1Q4G0N8 1177 aa12.69□□□□□ -0.38
NR1I3-222ENST00000506018 GADL1Q6ZQY3 521 aa12.69□□□□□ -0.38
NR1I3-222ENST00000506018 PRRT2Q7Z6L0 340 aaPredicted RBP12.69□□□□□ -0.38
NR1I3-222ENST00000506018 CRACR2BQ8N4Y2 399 aaPredicted RBP12.69□□□□□ -0.38
NR1I3-222ENST00000506018 AS3MTQ9HBK9 375 aa12.69□□□□□ -0.38
NR1I3-222ENST00000506018 TLR7Q9NYK1 1049 aaKnown RBP12.69□□□□□ -0.38
NR1I3-222ENST00000506018 SLC45A1Q9Y2W3 748 aa12.69□□□□□ -0.38
NR1I3-222ENST00000506018 AFG3L2Q9Y4W6 797 aa12.69□□□□□ -0.38
NR1I3-222ENST00000506018 PDE3AQ14432 1141 aa12.68□□□□□ -0.38
NR1I3-222ENST00000506018 C17orf99Q6UX52 265 aa12.68□□□□□ -0.38
NR1I3-222ENST00000506018 FOXP4Q8IVH2 680 aaPredicted RBP12.68□□□□□ -0.38
NR1I3-222ENST00000506018 TGFBRAP1Q8WUH2 860 aa12.68□□□□□ -0.38
NR1I3-222ENST00000506018 TMEM106CQ9BVX2 250 aa12.68□□□□□ -0.38
NR1I3-222ENST00000506018 ZBTB40Q9NUA8 1239 aa12.68□□□□□ -0.38
NR1I3-222ENST00000506018 PNMA3Q9UL41 463 aa12.68□□□□□ -0.38
NR1I3-222ENST00000506018 KIAA0100Q14667 2235 aaKnown RBP12.67□□□□□ -0.38
NR1I3-222ENST00000506018 TRIM75PA6NK02 468 aa12.67□□□□□ -0.38
NR1I3-222ENST00000506018 APBB1O00213 710 aa12.67□□□□□ -0.38
NR1I3-222ENST00000506018 CAP2P40123 477 aa12.67□□□□□ -0.38
NR1I3-222ENST00000506018 USP5P45974 858 aa12.67□□□□□ -0.38
NR1I3-222ENST00000506018 PABPC4Q13310 644 aaKnown RBP eCLIP12.67□□□□□ -0.38
NR1I3-222ENST00000506018 MAPKAPK5Q8IW41 473 aa12.67□□□□□ -0.38
NR1I3-222ENST00000506018 MAGEB6Q8N7X4 407 aa12.67□□□□□ -0.38
NR1I3-222ENST00000506018 SMCR8Q8TEV9 937 aaPredicted RBP12.67□□□□□ -0.38
NR1I3-222ENST00000506018 ARMC5Q96C12 935 aa12.67□□□□□ -0.38
NR1I3-222ENST00000506018 IL1RAPL2Q9NP60 686 aa12.67□□□□□ -0.38
NR1I3-222ENST00000506018 PIH1D3Q9NQM4 214 aaKnown RBP12.67□□□□□ -0.38
NR1I3-222ENST00000506018 GINM1Q9NU53 330 aa12.67□□□□□ -0.38
NR1I3-222ENST00000506018 CPA4Q9UI42 421 aa12.67□□□□□ -0.38
NR1I3-222ENST00000506018 FLT1P17948 1338 aa12.66□□□□□ -0.38
NR1I3-222ENST00000506018 USP17L5A8MUK1 530 aa12.66□□□□□ -0.38
NR1I3-222ENST00000506018 FMNL1O95466 1100 aaPredicted RBP12.66□□□□□ -0.38
NR1I3-222ENST00000506018 ASNSP08243 561 aa12.66□□□□□ -0.38
NR1I3-222ENST00000506018 FCGRTP55899 365 aa12.66□□□□□ -0.38
NR1I3-222ENST00000506018 PROCA1Q8NCQ7 364 aaPredicted RBP12.66□□□□□ -0.38
NR1I3-222ENST00000506018 ZNF280CQ8ND82 737 aa12.66□□□□□ -0.38
NR1I3-222ENST00000506018 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.66□□□□□ -0.38
NR1I3-222ENST00000506018 LOC285556D6RIA3 1793 aa12.65□□□□□ -0.38
NR1I3-222ENST00000506018 FAM196BA6NMK8 535 aa12.65□□□□□ -0.38
NR1I3-222ENST00000506018 PSMC4P43686 418 aa12.65□□□□□ -0.38
NR1I3-222ENST00000506018 MOGSQ13724 837 aa12.65□□□□□ -0.38
NR1I3-222ENST00000506018 GPAT2Q6NUI2 795 aa12.65□□□□□ -0.38
NR1I3-222ENST00000506018 ADGRA1Q86SQ6 560 aa12.65□□□□□ -0.38
NR1I3-222ENST00000506018 BCL11AQ9H165 835 aa12.65□□□□□ -0.38
NR1I3-222ENST00000506018 AGTPBP1Q9UPW5 1226 aa12.65□□□□□ -0.38
NR1I3-222ENST00000506018 PTCH2Q9Y6C5 1203 aa12.65□□□□□ -0.38
NR1I3-222ENST00000506018 MYH7P12883 1935 aa12.65□□□□□ -0.39
NR1I3-222ENST00000506018 ZSWIM8A7E2V4 1837 aa12.65□□□□□ -0.39
NR1I3-222ENST00000506018 SIPA1L1O43166 1804 aa12.65□□□□□ -0.39
NR1I3-222ENST00000506018 CYP2C8P10632 490 aa12.64□□□□□ -0.39
NR1I3-222ENST00000506018 OSBPP22059 807 aa12.64□□□□□ -0.39
NR1I3-222ENST00000506018 SPP2Q13103 211 aa12.64□□□□□ -0.39
NR1I3-222ENST00000506018 SLC4A8Q2Y0W8 1093 aa12.64□□□□□ -0.39
NR1I3-222ENST00000506018 TTC6Q86TZ1 520 aa12.64□□□□□ -0.39
NR1I3-222ENST00000506018 MIGA1Q8NAN2 632 aa12.64□□□□□ -0.39
NR1I3-222ENST00000506018 RAET1EQ8TD07 263 aa12.64□□□□□ -0.39
NR1I3-222ENST00000506018 TMOD4Q9NZQ9 345 aa12.64□□□□□ -0.39
NR1I3-222ENST00000506018 PALD1Q9ULE6 856 aa12.64□□□□□ -0.39
NR1I3-222ENST00000506018 NAV1Q8NEY1 1877 aa12.64□□□□□ -0.39
NR1I3-222ENST00000506018 ADGRA2Q96PE1 1338 aa12.63□□□□□ -0.39
NR1I3-222ENST00000506018 SLURP2P0DP57 97 aa12.63□□□□□ -0.39
NR1I3-222ENST00000506018 DYNLL1P63167 89 aaKnown RBP12.63□□□□□ -0.39
NR1I3-222ENST00000506018 ZNF333Q96JL9 665 aa12.63□□□□□ -0.39
NR1I3-222ENST00000506018 DNAJC2Q99543 621 aaKnown RBP12.63□□□□□ -0.39
NR1I3-222ENST00000506018 ARHGAP39Q9C0H5 1083 aa12.63□□□□□ -0.39
NR1I3-222ENST00000506018 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.63□□□□□ -0.39
NR1I3-222ENST00000506018 SRRDQ9UH36 339 aa12.63□□□□□ -0.39
NR1I3-222ENST00000506018 SAP30BPQ9UHR5 308 aaKnown RBP12.63□□□□□ -0.39
NR1I3-222ENST00000506018 MYH8P13535 1937 aa12.63□□□□□ -0.39
NR1I3-222ENST00000506018 MYPNQ86TC9 1320 aa12.63□□□□□ -0.39
NR1I3-222ENST00000506018 MAGEB6P1A0A0J9YX57 407 aa12.62□□□□□ -0.39
NR1I3-222ENST00000506018 C19orf81C9J6K1 198 aa12.62□□□□□ -0.39
NR1I3-222ENST00000506018 ECM2O94769 699 aaPredicted RBP12.62□□□□□ -0.39
NR1I3-222ENST00000506018 BCRP11274 1271 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms