RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 REM2Q8IYK8 340 aaPredicted RBP8.79□□□□□ -1
USP46-203ENST00000502443 CRACR2BQ8N4Y2 399 aaPredicted RBP8.79□□□□□ -1
USP46-203ENST00000502443 SDR42E1Q8WUS8 393 aa8.79□□□□□ -1
USP46-203ENST00000502443 CNKSR2Q8WXI2 1034 aa8.79□□□□□ -1
USP46-203ENST00000502443 APPBP2Q92624 585 aa8.79□□□□□ -1
USP46-203ENST00000502443 OSBP2Q969R2 916 aa8.79□□□□□ -1
USP46-203ENST00000502443 OTUD5Q96G74 571 aa8.79□□□□□ -1
USP46-203ENST00000502443 OSBPL3Q9H4L5 887 aa8.79□□□□□ -1
USP46-203ENST00000502443 MCM9Q9NXL9 1143 aa8.79□□□□□ -1
USP46-203ENST00000502443 HERC5Q9UII4 1024 aaKnown RBP8.79□□□□□ -1
USP46-203ENST00000502443 MANSC4A6NHS7 340 aaPredicted RBP8.78□□□□□ -1
USP46-203ENST00000502443 SPDYE5A6NIY4 337 aa8.78□□□□□ -1
USP46-203ENST00000502443 FOXN1O15353 648 aa8.78□□□□□ -1
USP46-203ENST00000502443 CTNND1O60716 968 aaKnown RBP8.78□□□□□ -1
USP46-203ENST00000502443 PDE4AP27815 886 aa8.78□□□□□ -1
USP46-203ENST00000502443 SREBF2Q12772 1141 aa8.78□□□□□ -1
USP46-203ENST00000502443 NOL9Q5SY16 702 aaKnown RBP8.78□□□□□ -1
USP46-203ENST00000502443 TTC6Q86TZ1 520 aa8.78□□□□□ -1
USP46-203ENST00000502443 ERO1BQ86YB8 467 aa8.78□□□□□ -1
USP46-203ENST00000502443 RILPL2Q969X0 211 aa8.78□□□□□ -1
USP46-203ENST00000502443 DDRGK1Q96HY6 314 aa8.78□□□□□ -1
USP46-203ENST00000502443 STRBPQ96SI9 672 aaKnown RBP8.78□□□□□ -1
USP46-203ENST00000502443 DCP1AQ9NPI6 582 aaPredicted RBP8.78□□□□□ -1
USP46-203ENST00000502443 PICK1Q9NRD5 415 aa8.78□□□□□ -1
USP46-203ENST00000502443 ATP8A2Q9NTI2 1148 aa8.78□□□□□ -1
USP46-203ENST00000502443 SLC4A4Q9Y6R1 1079 aa8.78□□□□□ -1
USP46-203ENST00000502443 NAV1Q8NEY1 1877 aa8.78□□□□□ -1
USP46-203ENST00000502443 BAZ2AQ9UIF9 1905 aaKnown RBP8.78□□□□□ -1
USP46-203ENST00000502443 SIPA1L1O43166 1804 aa8.77□□□□□ -1
USP46-203ENST00000502443 M0R2C6 588 aa8.77□□□□□ -1.01
USP46-203ENST00000502443 IRF6O14896 467 aa8.77□□□□□ -1.01
USP46-203ENST00000502443 GPAA1O43292 621 aa8.77□□□□□ -1.01
USP46-203ENST00000502443 CA12O43570 354 aa8.77□□□□□ -1.01
USP46-203ENST00000502443 TRPA1O75762 1119 aa8.77□□□□□ -1.01
USP46-203ENST00000502443 PTPRAP18433 802 aa8.77□□□□□ -1.01
USP46-203ENST00000502443 TM4SF4P48230 202 aa8.77□□□□□ -1.01
USP46-203ENST00000502443 CTCFP49711 727 aaPredicted RBP8.77□□□□□ -1.01
USP46-203ENST00000502443 PLCD1P51178 756 aa8.77□□□□□ -1.01
USP46-203ENST00000502443 INHBEP58166 350 aa8.77□□□□□ -1.01
USP46-203ENST00000502443 PPATQ06203 517 aa8.77□□□□□ -1.01
USP46-203ENST00000502443 ZMYM1Q5SVZ6 1142 aa8.77□□□□□ -1.01
USP46-203ENST00000502443 CENPQQ7L2Z9 268 aaPredicted RBP8.77□□□□□ -1.01
USP46-203ENST00000502443 METTL16Q86W50 562 aaKnown RBP8.77□□□□□ -1.01
USP46-203ENST00000502443 SCYL3Q8IZE3 742 aa8.77□□□□□ -1.01
USP46-203ENST00000502443 CCDC136Q96JN2 1154 aa8.77□□□□□ -1.01
USP46-203ENST00000502443 SEC62Q99442 399 aaKnown RBP8.77□□□□□ -1.01
USP46-203ENST00000502443 RNF186Q9NXI6 227 aa8.77□□□□□ -1.01
USP46-203ENST00000502443 SERPINB13Q9UIV8 391 aa8.77□□□□□ -1.01
USP46-203ENST00000502443 TSKSQ9UJT2 592 aa8.77□□□□□ -1.01
USP46-203ENST00000502443 ZHX2Q9Y6X8 837 aa8.77□□□□□ -1.01
USP46-203ENST00000502443 DOCK1Q14185 1865 aa8.77□□□□□ -1.01
USP46-203ENST00000502443 ATAD5Q96QE3 1844 aa8.76□□□□□ -1.01
USP46-203ENST00000502443 USP17L12C9JPN9 530 aa8.76□□□□□ -1.01
USP46-203ENST00000502443 USP17L21D6R901 530 aa8.76□□□□□ -1.01
USP46-203ENST00000502443 APPP05067 770 aa8.76□□□□□ -1.01
USP46-203ENST00000502443 CYP2D6P10635 497 aa8.76□□□□□ -1.01
USP46-203ENST00000502443 GNAT2P19087 354 aa8.76□□□□□ -1.01
USP46-203ENST00000502443 CAP2P40123 477 aa8.76□□□□□ -1.01
USP46-203ENST00000502443 GTF2A2P52657 109 aa8.76□□□□□ -1.01
USP46-203ENST00000502443 LBX1P52954 281 aa8.76□□□□□ -1.01
USP46-203ENST00000502443 PPIL2Q13356 520 aa8.76□□□□□ -1.01
USP46-203ENST00000502443 SNAPC2Q13487 334 aa8.76□□□□□ -1.01
USP46-203ENST00000502443 IFNL1Q8IU54 200 aa8.76□□□□□ -1.01
USP46-203ENST00000502443 AMOTL1Q8IY63 956 aa8.76□□□□□ -1.01
USP46-203ENST00000502443 MS4A4AQ96JQ5 239 aa8.76□□□□□ -1.01
USP46-203ENST00000502443 EHD4Q9H223 541 aa8.76□□□□□ -1.01
USP46-203ENST00000502443 DNAJC18Q9H819 358 aa8.76□□□□□ -1.01
USP46-203ENST00000502443 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.76□□□□□ -1.01
USP46-203ENST00000502443 DDX60LQ5H9U9 1706 aaKnown RBP8.76□□□□□ -1.01
USP46-203ENST00000502443 CYP2D7A0A087X1C5 515 aa8.75□□□□□ -1.01
USP46-203ENST00000502443 CCL15-CCL14A0A0B4J2E2 113 aa8.75□□□□□ -1.01
USP46-203ENST00000502443 GSG1L2A8MUP6 293 aa8.75□□□□□ -1.01
USP46-203ENST00000502443 PATL2C9JE40 543 aaKnown RBP8.75□□□□□ -1.01
USP46-203ENST00000502443 GDF11O95390 407 aa8.75□□□□□ -1.01
USP46-203ENST00000502443 CETPP11597 493 aa8.75□□□□□ -1.01
USP46-203ENST00000502443 EVX2Q03828 476 aa8.75□□□□□ -1.01
USP46-203ENST00000502443 RRP1BQ14684 758 aaKnown RBP8.75□□□□□ -1.01
USP46-203ENST00000502443 CCL15Q16663 113 aa8.75□□□□□ -1.01
USP46-203ENST00000502443 TTC22Q5TAA0 569 aa8.75□□□□□ -1.01
USP46-203ENST00000502443 OTUD7BQ6GQQ9 843 aa8.75□□□□□ -1.01
USP46-203ENST00000502443 GIMAP6Q6P9H5 292 aa8.75□□□□□ -1.01
USP46-203ENST00000502443 CTR9Q6PD62 1173 aa8.75□□□□□ -1.01
USP46-203ENST00000502443 CCDC129Q6ZRS4 1044 aa8.75□□□□□ -1.01
USP46-203ENST00000502443 CCDC84Q86UT8 332 aaPredicted RBP8.75□□□□□ -1.01
USP46-203ENST00000502443 TICAM2Q86XR7 235 aa8.75□□□□□ -1.01
USP46-203ENST00000502443 FAM227BQ96M60 508 aa8.75□□□□□ -1.01
USP46-203ENST00000502443 PTPN18Q99952 460 aa8.75□□□□□ -1.01
USP46-203ENST00000502443 HELLSQ9NRZ9 838 aa8.75□□□□□ -1.01
USP46-203ENST00000502443 SAGE1Q9NXZ1 904 aa8.75□□□□□ -1.01
USP46-203ENST00000502443 GTF3C3Q9Y5Q9 886 aa8.75□□□□□ -1.01
USP46-203ENST00000502443 LAMB1P07942 1786 aa8.75□□□□□ -1.01
USP46-203ENST00000502443 A0A0D9SFI3 127 aa8.74□□□□□ -1.01
USP46-203ENST00000502443 TESPA1A2RU30 521 aaPredicted RBP8.74□□□□□ -1.01
USP46-203ENST00000502443 TRIM75PA6NK02 468 aa8.74□□□□□ -1.01
USP46-203ENST00000502443 USP17L5A8MUK1 530 aa8.74□□□□□ -1.01
USP46-203ENST00000502443 MINDY4BA8MYZ0 360 aa8.74□□□□□ -1.01
USP46-203ENST00000502443 IGF2BP3O00425 579 aaKnown RBP eCLIP8.74□□□□□ -1.01
USP46-203ENST00000502443 TBC1D8O95759 1140 aa8.74□□□□□ -1.01
USP46-203ENST00000502443 ALDH1A1P00352 501 aa8.74□□□□□ -1.01
USP46-203ENST00000502443 ASNSP08243 561 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms