RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 TMX4Q9H1E5 349 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-224ENST00000497488 ANTXR1Q9H6X2 564 aa7.71□□□□□ -1.18
BRCA1-224ENST00000497488 OBP2AQ9NY56 170 aa7.71□□□□□ -1.18
BRCA1-224ENST00000497488 GPN3Q9UHW5 284 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-224ENST00000497488 POLR3KQ9Y2Y1 108 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-224ENST00000497488 SLC12A7Q9Y666 1083 aa7.71□□□□□ -1.18
BRCA1-224ENST00000497488 SCRIBQ14160 1630 aa7.7□□□□□ -1.18
BRCA1-224ENST00000497488 EXOC5O00471 708 aa7.7□□□□□ -1.18
BRCA1-224ENST00000497488 RELBQ01201 579 aa7.7□□□□□ -1.18
BRCA1-224ENST00000497488 MAP7Q14244 749 aa7.7□□□□□ -1.18
BRCA1-224ENST00000497488 STAT4Q14765 748 aa7.7□□□□□ -1.18
BRCA1-224ENST00000497488 SETDB1Q15047 1291 aa7.7□□□□□ -1.18
BRCA1-224ENST00000497488 MAPRE1Q15691 268 aaKnown RBP7.7□□□□□ -1.18
BRCA1-224ENST00000497488 LRRFIP1Q32MZ4 808 aaKnown RBP7.7□□□□□ -1.18
BRCA1-224ENST00000497488 ERAP2Q6P179 960 aa7.7□□□□□ -1.18
BRCA1-224ENST00000497488 TAB3Q8N5C8 712 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-224ENST00000497488 ZSCAN1Q8NBB4 408 aa7.7□□□□□ -1.18
BRCA1-224ENST00000497488 JPH3Q8WXH2 748 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-224ENST00000497488 MRPL4Q9BYD3 311 aaKnown RBP7.7□□□□□ -1.18
BRCA1-224ENST00000497488 RHOBTB2Q9BYZ6 727 aa7.7□□□□□ -1.18
BRCA1-224ENST00000497488 TRIM8Q9BZR9 551 aa7.7□□□□□ -1.18
BRCA1-224ENST00000497488 PUS7LQ9H0K6 701 aaKnown RBP7.7□□□□□ -1.18
BRCA1-224ENST00000497488 LZTS1Q9Y250 596 aa7.7□□□□□ -1.18
BRCA1-224ENST00000497488 SPEF1Q9Y4P9 236 aa7.7□□□□□ -1.18
BRCA1-224ENST00000497488 SAMM50Q9Y512 469 aa7.7□□□□□ -1.18
BRCA1-224ENST00000497488 METTL12A8MUP2 240 aa7.69□□□□□ -1.18
BRCA1-224ENST00000497488 VSTM5A8MXK1 200 aa7.69□□□□□ -1.18
BRCA1-224ENST00000497488 COL6A1P12109 1028 aa7.69□□□□□ -1.18
BRCA1-224ENST00000497488 ACPPP15309 386 aa7.69□□□□□ -1.18
BRCA1-224ENST00000497488 ZSCAN20P17040 1043 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-224ENST00000497488 PTMSP20962 102 aa7.69□□□□□ -1.18
BRCA1-224ENST00000497488 BMP6P22004 513 aa7.69□□□□□ -1.18
BRCA1-224ENST00000497488 MAN1A1P33908 653 aa7.69□□□□□ -1.18
BRCA1-224ENST00000497488 PHKA2P46019 1235 aa7.69□□□□□ -1.18
BRCA1-224ENST00000497488 RPIAP49247 311 aa7.69□□□□□ -1.18
BRCA1-224ENST00000497488 DGKGP49619 791 aa7.69□□□□□ -1.18
BRCA1-224ENST00000497488 DHCR24Q15392 516 aa7.69□□□□□ -1.18
BRCA1-224ENST00000497488 FAM209AQ5JX71 171 aa7.69□□□□□ -1.18
BRCA1-224ENST00000497488 FAM83BQ5T0W9 1011 aa7.69□□□□□ -1.18
BRCA1-224ENST00000497488 IL31Q6EBC2 164 aa7.69□□□□□ -1.18
BRCA1-224ENST00000497488 CXorf57Q6NSI4 855 aaKnown RBP7.69□□□□□ -1.18
BRCA1-224ENST00000497488 LIAT1Q6ZQX7 453 aa7.69□□□□□ -1.18
BRCA1-224ENST00000497488 SPATS2Q86XZ4 545 aaKnown RBP7.69□□□□□ -1.18
BRCA1-224ENST00000497488 AHI1Q8N157 1196 aa7.69□□□□□ -1.18
BRCA1-224ENST00000497488 CEP63Q96MT8 703 aa7.69□□□□□ -1.18
BRCA1-224ENST00000497488 ZNF576Q9H609 170 aa7.69□□□□□ -1.18
BRCA1-224ENST00000497488 ZNF395Q9H8N7 513 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-224ENST00000497488 TMEM39AQ9NV64 488 aa7.69□□□□□ -1.18
BRCA1-224ENST00000497488 TRHDEQ9UKU6 1024 aa7.69□□□□□ -1.18
BRCA1-224ENST00000497488 CYP8B1Q9UNU6 501 aa7.69□□□□□ -1.18
BRCA1-224ENST00000497488 GABRDO14764 452 aa7.68□□□□□ -1.18
BRCA1-224ENST00000497488 GRIN3BO60391 1043 aa7.68□□□□□ -1.18
BRCA1-224ENST00000497488 BRINP1O60477 761 aa7.68□□□□□ -1.18
BRCA1-224ENST00000497488 MMP20O60882 483 aa7.68□□□□□ -1.18
BRCA1-224ENST00000497488 NPTXRO95502 500 aa7.68□□□□□ -1.18
BRCA1-224ENST00000497488 NBPF7P0C2Y1 421 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-224ENST00000497488 HTR3AP46098 478 aa7.68□□□□□ -1.18
BRCA1-224ENST00000497488 RPL6Q02878 288 aaKnown RBP7.68□□□□□ -1.18
BRCA1-224ENST00000497488 TMEM40Q8WWA1 233 aa7.68□□□□□ -1.18
BRCA1-224ENST00000497488 GAL3ST3Q96A11 431 aa7.68□□□□□ -1.18
BRCA1-224ENST00000497488 CDC6Q99741 560 aa7.68□□□□□ -1.18
BRCA1-224ENST00000497488 BHLHE41Q9C0J9 482 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-224ENST00000497488 JADE2Q9NQC1 790 aa7.68□□□□□ -1.18
BRCA1-224ENST00000497488 USP25Q9UHP3 1055 aa7.68□□□□□ -1.18
BRCA1-224ENST00000497488 DAAM1Q9Y4D1 1078 aa7.68□□□□□ -1.18
BRCA1-224ENST00000497488 SCINQ9Y6U3 715 aa7.68□□□□□ -1.18
BRCA1-224ENST00000497488 A0A096LPE4 126 aa7.67□□□□□ -1.18
BRCA1-224ENST00000497488 A0A1W2PPZ6 126 aa7.67□□□□□ -1.18
BRCA1-224ENST00000497488 CFAP69A5D8W1 941 aa7.67□□□□□ -1.18
BRCA1-224ENST00000497488 SPATA31C2B4DYI2 1134 aa7.67□□□□□ -1.18
BRCA1-224ENST00000497488 DNAJC8O75937 253 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-224ENST00000497488 SASH3O75995 380 aa7.67□□□□□ -1.18
BRCA1-224ENST00000497488 HSP90AA1P07900 732 aaKnown RBP7.67□□□□□ -1.18
BRCA1-224ENST00000497488 POU3F2P20265 443 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-224ENST00000497488 NEK3P51956 506 aa7.67□□□□□ -1.18
BRCA1-224ENST00000497488 PICALMQ13492 652 aa7.67□□□□□ -1.18
BRCA1-224ENST00000497488 ZYXQ15942 572 aaKnown RBP7.67□□□□□ -1.18
BRCA1-224ENST00000497488 ARSJQ5FYB0 599 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-224ENST00000497488 EFCAB2Q5VUJ9 269 aa7.67□□□□□ -1.18
BRCA1-224ENST00000497488 PKN3Q6P5Z2 889 aa7.67□□□□□ -1.18
BRCA1-224ENST00000497488 NCAPG2Q86XI2 1143 aa7.67□□□□□ -1.18
BRCA1-224ENST00000497488 PJA1Q8NG27 643 aa7.67□□□□□ -1.18
BRCA1-224ENST00000497488 SLC7A3Q8WY07 619 aa7.67□□□□□ -1.18
BRCA1-224ENST00000497488 SARGQ9BW04 601 aa7.67□□□□□ -1.18
BRCA1-224ENST00000497488 PHAXQ9H814 394 aaKnown RBP7.67□□□□□ -1.18
BRCA1-224ENST00000497488 OSGEPQ9NPF4 335 aa7.67□□□□□ -1.18
BRCA1-224ENST00000497488 ARHGEF4Q9NR80 690 aa7.67□□□□□ -1.18
BRCA1-224ENST00000497488 LTBP3Q9NS15 1303 aa7.67□□□□□ -1.18
BRCA1-224ENST00000497488 TRBV23-1A0A0A0MS06 115 aa7.66□□□□□ -1.18
BRCA1-224ENST00000497488 TRPA1O75762 1119 aa7.66□□□□□ -1.18
BRCA1-224ENST00000497488 TCEA3O75764 348 aa7.66□□□□□ -1.18
BRCA1-224ENST00000497488 TRAPPC10P48553 1259 aa7.66□□□□□ -1.18
BRCA1-224ENST00000497488 RNF144AP50876 292 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-224ENST00000497488 PPP2R3AQ06190 1150 aa7.66□□□□□ -1.18
BRCA1-224ENST00000497488 TCIRG1Q13488 830 aa7.66□□□□□ -1.18
BRCA1-224ENST00000497488 LRRC14Q15048 493 aa7.66□□□□□ -1.18
BRCA1-224ENST00000497488 SYDE2Q5VT97 1194 aa7.66□□□□□ -1.18
BRCA1-224ENST00000497488 KIAA1211LQ6NV74 962 aa7.66□□□□□ -1.18
BRCA1-224ENST00000497488 UNC5AQ6ZN44 842 aa7.66□□□□□ -1.18
BRCA1-224ENST00000497488 CNTD1Q8N815 330 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms